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dataset

Allen Institute Neural Dynamics: Visual Coding + OpenScope Electrophysiology

📁 Dataset Info

Open-access neural dynamics recordings from Allen Institute. Includes electrophysiology datasets spanning hippocampal circuits, cortical dynamics, and sensory processing in mouse models. Provides circuit-level quantitative data for identifying neurodegeneration-relevant circuit disruptions. Referenced in circuit-level neurodegeneration analyses.

Format
remote
License
CC-BY-4.0
Domain
neurodegeneration
Column schema (14 columns)
experiment_idtextUnique experiment identifier
animal_idtextMouse identifier
cell_typetextCell type family (excitatory/pv/sst/vip)
brain_regiontextBrain region acronym (VISp, MOs, etc.)
brain_subregiontextDetailed subregion
reporter_linetextTransgenic reporter line
imaging_depth_umintegerImaging depth in microns
stimulus_typetextVisual stimulus presented
cell_specimen_idtextCell-specific specimen ID from Allen Brain Observatory
_session_typetextExperiment session type
areatextAllen Brain Atlas area ID
layertextCortical layer if applicable
ephys_probetextNeuropixels probe configuration (OpenScope)
signaltextSignal type (fluorescence/spikeband)
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