🧪
hypothesis

Neuronal-specific domain stabilization

Hypothesis

Neuronal-specific domain stabilization

Axon initial segment (AIS) infrastructure provides additional regulatory context that consolidates MAP-established domains; in fibroblasts, domains are less stable without this architectural support.
🧬 ANK2🩺 neurodegeneration🎯 Composite 55%💱 $0.53▲0.5%proposed
EvidenceModerate (50%)📖 6 cit🗣 1 debates 6 support 2 oppose
⚠ Orphaned Senate Quality Gates →
Mechanistic 0.60 (15%) Evidence 0.55 (15%) Novelty 0.55 (12%) Feasibility 0.55 (12%) Impact 0.00 (12%) Druggability 0.00 (10%) Safety 0.00 (8%) Competition 0.00 (6%) Data Avail. 0.00 (5%) Reproducible 0.70 (5%) KG Connect 0.50 (8%) 0.550 composite
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Composite55%

🧪 Overview

Axon initial segment (AIS) infrastructure provides additional regulatory context that consolidates MAP-established domains; in fibroblasts, domains are less stable without this architectural support

Prediction: Transplanting AIS components into fibroblasts will produce more robust and long-lasting tau/MAP6 domain segregation

🧬 Mechanism

🧬 Curated Mechanism Pathway

Curated pathway from expert analysis

flowchart TD
    A["MAPT/Tau Protein<br/>Microtubule Stabilizer"]
    B["CDK5/GSK3B Activation<br/>Kinase Dysregulation"]
    C["Tau Hyperphosphorylation<br/>Ser396/Thr231/Ser202"]
    D["Tau Detachment<br/>Microtubule Destabilized"]
    E["Tau Oligomers<br/>Paired Helical Filaments"]
    F["Neurofibrillary Tangles<br/>Intraneuronal Inclusions"]
    G["Axonal Transport Failure<br/>Synaptic Dysfunction"]
    H["Neurodegeneration<br/>Tauopathy Spread"]
    A --> B
    B --> C
    C --> D
    D --> E
    E --> F
    D --> G
    G --> H
    F --> H
    style A fill:#1a237e,stroke:#4fc3f7,color:#4fc3f7
    style C fill:#b71c1c,stroke:#ef9a9a,color:#ef9a9a
    style H fill:#b71c1c,stroke:#ef9a9a,color:#ef9a9a

⚖️ Evidence

⚖️ Evidence Matrix6 supports2 contradicts
Supports
Axon initial segment (AIS) infrastructure provides additional regulatory context that consolidates MAP-established domains; in fibroblasts, domains are less stable without this architectural support
Supports
Autism-associated ANK2 regulates embryonic neurodevelopment.
Biochem Biophys Res Commun2022PMID:35313230medium
Supports
A Mutation in the ANK2 Gene Causing ASD and a Review of the Literature.
Mol Genet Genomic Med2025PMID:40035441medium
Supports
Self-limited familial focal epilepsy caused by ANK2 variants: A potentially under-recognized condition.
Epilepsia Open2025PMID:39962910medium
Supports
Roles of ANK2/ankyrin-B in neurodevelopmental disorders: Isoform functions and implications for autism spectrum disorder and epilepsy.
Curr Opin Neurobiol2025PMID:39631164medium
Supports
ANK2 loss-of-function variants are associated with epilepsy, and lead to impaired axon initial segment plasticity and hyperactive network activity in hiPSC-derived neuronal networks.
Hum Mol Genet2023PMID:37195288medium
Contradicts
Ankyrin-G and AIS organization depend on many binding partners, making ANK2-only domain stabilization an incomplete model of neuronal compartment maintenance.
Biomolecules2025PMID:40563541medium
Contradicts
AIS abnormalities are emphasized in neurodevelopmental disorders, so evidence for direct neurodegenerative therapeutic relevance is indirect.
Cells2021PMID:34440880medium
📖 Linked Papers

No linked papers recorded for this hypothesis yet.

🏥 Translation

🧬 3D Protein Structure — ANK2

No curated PDB or AlphaFold mapping for ANK2 yet. Search RCSB →

🧠 GTEx v10 Brain ExpressionJSON

Median TPM across 13 brain regions for ANK2 from GTEx v10.

Cerebellum75.4 Cerebellar Hemisphere70.9 Frontal Cortex BA945.6 Cortex38.5 Anterior cingulate cortex BA2434.7 Nucleus accumbens basal ganglia31.7 Hypothalamus27.0 Caudate basal ganglia24.4 Amygdala22.9 Substantia nigra19.9 Hippocampus19.5 Putamen basal ganglia18.6 Spinal cord cervical c-117.3median TPM (GTEx v10)

💉 Clinical Trials (1)Relevance: 65%

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No curated ClinVar variants loaded for this hypothesis.

Run scripts/backfill_clinvar_variants.py to fetch P/LP/VUS variants.

🔍 Search ClinVar for ANK2 →

No DepMap CRISPR Chronos data found for ANK2.

Run python3 scripts/backfill_hypothesis_depmap.py to populate.

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💾 Resource Usage

No resource usage or linked notebooks recorded for this hypothesis yet.

🔮 Predictions

🔎 Predictions vs Observations2 predictions · 0 with recorded observations
PredictionPredictedObservedStatusConf
IF we express the neuronal ANK2 isoform (ANK2-G) in human fibroblasts via lentiviral transduction, THEN we will observe a statistically significant increase in tau/MAP6 domain stability (measured by FEnhanced domain stability in fibroblasts expressing neuronal ANK2, manifested as slower fluorescence recovery in FRAP assays and reduced domain dissolution even— no observation —pending0.35
IF we acutely disrupt AIS integrity in mature hippocampal neurons using pharmacological (sodium channel blocker) or genetic (ankyrin-G CRISPR knockout) approaches, THEN we will observe a >50% decreaseRapid destabilization of microtubule-associated protein domains following AIS disruption, evidenced by increased FRAP mobile fraction and decreased domain dwell— no observation —pending0.45
🔮 Falsifiable Predictions (2)
pendingconf 45%
IF we acutely disrupt AIS integrity in mature hippocampal neurons using pharmacological (sodium channel blocker) or genetic (ankyrin-G CRISPR knockout) approaches, THEN we will observe a >50% decrease in tau/MAP6 domain stability (measured by increased mobile fraction in FRAP and shorter domain life
Predicted outcome: Rapid destabilization of microtubule-associated protein domains following AIS disruption, evidenced by increased FRAP mobile fraction and decreased do
Falsification: Domain stability metrics remain unchanged (within 10%) after AIS disruption, or domains become MORE stable, indicating AIS is not the primary architectural constraint for MAP domain maintenance in neu
pendingconf 35%
IF we express the neuronal ANK2 isoform (ANK2-G) in human fibroblasts via lentiviral transduction, THEN we will observe a statistically significant increase in tau/MAP6 domain stability (measured by FRAP recovery half-time increasing by >40%) within 5-7 days post-transduction, compared to GFP-transd
Predicted outcome: Enhanced domain stability in fibroblasts expressing neuronal ANK2, manifested as slower fluorescence recovery in FRAP assays and reduced domain dissol
Falsification: FRAP recovery half-times in ANK2-expressing fibroblasts remain statistically indistinguishable from control fibroblasts (p > 0.05), or domain stability metrics show <20% improvement, indicating AIS ar
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