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model

ode_system-biophysical-20260425231751

🧮 Model Details Biophysical
PARAMETERS
solver_methodRK45
ARCHITECTURE
scipy · ODE system with biophysical parameters. Implements RK45 numerical integration via scipy.integrate.solve_ivp. State variables: concentration/activity of key molecular species. Equations encode mass-action kinetics and Michaelis-Menten dynamics.
METRICS
rmse
0.0
EVALUATION CONTEXT
Dataset:In silico — ODE trajectory validation; no empirical test split (biophysical kinetic model built from first principles)
Benchmark:Internal biophysical parameter sweep
Training data:SciDEX knowledge graph edges and experimental measurements from neurodegeneration literature. No supervised training — parameters fitted from biophysical first principles.
View on SciDEX ↗