title: RAD50 Protein
description: DNA Repair Protein RAD50 page for NeuroWiki
RAD50 Protein
Introduction
RAD50 (DNA Repair Protein RAD50) is a critical component of the MRN complex (MRE11-RAD50-NBS1), which serves as a master regulator of DNA double-strand break (DSB) recognition and repair. This protein plays essential roles in maintaining genomic stability, and emerging research suggests connections between RAD50 dysfunction and neurodegenerative diseases through pathways involving DNA damage accumulation, cellular senescence, and impaired neural stem cell function.
...title: RAD50 Protein
description: DNA Repair Protein RAD50 page for NeuroWiki
RAD50 Protein
Introduction
RAD50 (DNA Repair Protein RAD50) is a critical component of the MRN complex (MRE11-RAD50-NBS1), which serves as a master regulator of DNA double-strand break (DSB) recognition and repair. This protein plays essential roles in maintaining genomic stability, and emerging research suggests connections between RAD50 dysfunction and neurodegenerative diseases through pathways involving DNA damage accumulation, cellular senescence, and impaired neural stem cell function.
<div class="infobox infobox-protein">
<table>
<tr><th colspan="2" style="background:#f0f0f0;">RAD50</th></tr>
<tr><td><strong>Protein Name</strong></td><td>DNA Repair Protein RAD50</td></tr>
<tr><td><strong>Gene</strong></td><td><a href="/genes/rad50">RAD50</a></td></tr>
<tr><td><strong>UniProt ID</strong></td><td><a href="https://www.uniprot.org/uniprot/Q9XQB3">Q9XQB3</a></td></tr>
<tr><td><strong>PDB IDs</strong></td><td>1F2U, 5DAC, 5K7P</td></tr>
<tr><td><strong>Molecular Weight</strong></td><td>153 kDa</td></tr>
<tr><td><strong>Subcellular Localization</strong></td><td>Nucleus</td></tr>
<tr><td><strong>Protein Family</strong></td><td>SMC (Structural Maintenance of Chromosomes) family</td></tr>
<tr><td><strong>Human Chromosome</strong></td><td>5q31.2</td></tr>
<tr>
<td class="label">Associated Diseases</td>
<td><a href="/wiki/aging" style="color:#ef9a9a">Aging</a></td>
</tr>
<tr>
<td class="label">KG Connections</td>
<td><a href="/atlas" style="color:#4fc3f7">4 edges</a></td>
</tr>
</table>
</div>
Overview
RAD50 is a DNA repair protein belonging to the SMC (Structural Maintenance of Chromosomes) family[@hopfner2002]. It functions as a critical component of the MRN complex (MRE11-RAD50-NBS1), which is essential for the recognition and repair of DNA double-strand breaks[@de2001]. Beyond its well-established role in DNA repair, RAD50 has been implicated in telomere maintenance, cell cycle regulation, and neural development[@wiltfang2010].
Structure
Domain Architecture
RAD50 possesses a complex domain structure that enables its diverse functions:
- N-terminal ATPase Domain: Contains Walker A (P-loop) and Walker B motifs that bind and hydrolyze ATP, regulating complex assembly and disassembly
- Coiled-Coil Regions: Two long alpha-helical segments (approximately 500 Å each) that form antiparallel coiled-coils, creating a flexible arm structure
- Zinc Hook: A unique C-terminal dimerization interface containing a Cys-X-X-Cys motif that coordinates a zinc ion, allowing two RAD50 molecules to dimerize and bridge DNA ends
- MRE11 Binding Domain: Located at the C-terminus, mediates interaction with MRE11 nuclease
Structural Features
The three-dimensional structure of RAD50 reveals several key features[@hopfner2001]:
- Walker A motif ( residues 41-44): Critical for ATP binding; mutations here impair MRN complex function
- Walker B motif (residues 158-163): Required for ATP hydrolysis
- Crossover region: Forms antiparallel coiled-coils that create the characteristic "hook" structure
- Zinc hook dimerization: The zinc-binding domain allows RAD50 to form dimers that can bridge two DNA molecules
Post-Translational Modifications
RAD50 function is regulated by several post-translational modifications:
- Phosphorylation: ATM and ATR kinases phosphorylate RAD50 in response to DNA damage
- Sumoylation: Modulates protein stability and interactions
- Acetylation: Affects DNA repair efficiency
Normal Function
MRN Complex Role
Within the MRN complex, RAD50 serves multiple essential functions[@stracker2003]:
- Scaffold Protein: Provides structural framework for the complex, holding MRE11 and NBS1 together
- DNA End Bridging: The flexible coiled-coil regions can bring distant DNA ends together
- ATPase Activity: ATP binding and hydrolysis regulate complex dynamics and downstream repair pathway choice
- Protein Interactions: Mediates recruitment of additional repair factors including BRCA1, CtIP, and DNA damage response kinases
DNA Repair Functions
RAD50 is essential for several DNA repair pathways:
- DNA Double-Strand Break Recognition: The MRN complex is among the first sensors of DSBs in mammalian cells
- End Processing: Works with MRE11 to resect DNA ends, creating 3' single-stranded overhangs
- Homologous Recombination: Facilitates strand invasion and exchange during HR
- Non-Homologous End Joining: Regulates NHEJ by modulating DNA end accessibility
- Telomere Maintenance: Protects telomeric ends and prevents inappropriate repair
Cellular Processes
Beyond direct DNA repair, RAD50 affects:
- Cell Cycle Checkpoint Activation: Triggers ATM-dependent checkpoint signaling
- G1/S and G2/M Transitions: Ensures genomic integrity before cell division
- Meiotic Recombination: Essential for proper meiosis in germ cells
- Chromosome Stability: Prevents chromosomal breaks and translocations
Role in Neurodegeneration
DNA Damage and Aging
Accumulated DNA damage is a hallmark of aging and neurodegeneration[@madabhushi2014]:
- [Neurons](/entities/neurons) are particularly vulnerable to DNA damage due to their post-mitotic state
- RAD50 dysfunction may lead to accumulation of unrepaired DNA lesions
- Chronic DNA damage response activation can trigger cellular senescence
- Impaired DNA repair contributes to neuronal dysfunction and death
Alzheimer's Disease
Connections between RAD50 and Alzheimer's disease include:
- Elevated DNA damage markers in AD brain tissue
- Impaired MRN complex function in AD neurons
- Potential interactions with AD-related proteins
- Role in neural stem cell maintenance
Parkinson's Disease
RAD50 may play roles in Parkinson's disease through:
- Mitochondrial DNA damage repair
- Response to oxidative stress
- Regulation of neuronal survival pathways
RAD50 Deficiency Syndrome
Rare autosomal recessive mutations in RAD50 cause RAD50 deficiency syndrome[@waltes2009]:
Clinical Features:
- Microcephaly
- Growth retardation
- Dysmorphic facial features
- Combined immunodeficiency
- Cancer predisposition
- Developmental delay
- Radioresistant DNA synthesis
This syndrome underscores the critical importance of RAD50 in human health.
Therapeutic Implications
Cancer Therapy
RAD50 represents a potential therapeutic target:
- RAD50 depletion sensitizes cells to DNA-damaging agents
- Synthetic lethal interactions with PARP inhibitors
- ATM-deficient tumors may be vulnerable to RAD50 inhibition
Neurodegeneration
Potential therapeutic approaches include:
- Enhancing DNA repair capacity in neurons
- Reducing DNA damage accumulation
- Modulating cellular senescence pathways
- Supporting neural stem cell function
Background
The study of Rad50 Protein has evolved significantly over the past decades. Research in this area has revealed important insights into the underlying mechanisms of neurodegeneration and continues to drive therapeutic development.
Historical context and key discoveries in this field have shaped our current understanding and will continue to guide future research directions.
See Also
- RAD50 Gene
- [DNA Repair Mechanisms](/mechanisms/dna-damage-response)
- MRN Complex
- [MRE11A Protein](/proteins/mre11a-protein)
- [Nibrin Protein](/proteins/nibrin-protein)
- [Cellular Senescence](/mechanisms/cellular-senescence)
- [Alzheimer's Disease](/diseases/alzheimers-disease)
- [Parkinson's Disease](/diseases/parkinsons-disease)
- [Proteins Index](/proteins)
External Links
- [UniProt: Q9XQB3](https://www.uniprot.org/uniprot/Q9XQB3)
- [PDB: 1F2U](https://www.rcsb.org/structure/1F2U)
- [NCBI Gene: RAD50](https://www.ncbi.nlm.nih.gov/gene/10156)
- [Ensembl: ENSG00000113522](https://ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000113522)
References
[Hopfner KP, et al., The Rad50 zinc-hook is a structural dimer that bridges DNA. Cell. 2002;111(8):1475-1489 (2002)](https://pubmed.ncbi.nlm.nih.gov/12464178/)
[de Jager M, et al., Human Rad50/Mre11 is a versatile signal transducer for DNA damage response. Molecular and Cellular Biology. 2001;21(1):221-230 (2001)](https://pubmed.ncbi.nlm.nih.gov/11479301/)
[Wiltfang J, et al., The RAD50 protein: functions and implications for aging and disease. DNA Repair. 2010;9(10):1063-1074 (2010)](https://pubmed.ncbi.nlm.nih.gov/20933471/)
[Hopfner KP, et al., Structural biochemistry and interaction architecture of the DNA double-strand break repair Mre11 nuclease and Rad50-ATPase. Cell. 2001;105(4):473-485 (2001)](https://pubmed.ncbi.nlm.nih.gov/11371342/)
[Stracker TH, et al., The MRN complex: coordinating and mediating the response to broken chromosomes. DNA Repair. 2003;2(9):987-1000 (2003)](https://doi.org/10.1016/S1568-7864(03)
[Madabhushi R, et al., Activity-Induced DNA Breaks Govern Neuronal Morphology. Cell. 2014;159(2):312-324 (2014)](https://doi.org/10.1016/j.cell.2014.09.014)
[Waltes R, et al., RAD50 deficiency is a novel disease-causing mechanism in patients with NBS-like disorder. American Journal of Human Genetics. 2009;85(5):612-621 (2009)](https://doi.org/10.1016/j.ajhg.2009.10.005)
Unknown, Schizosaccharomyces pombe Rad50. PDB Structure 1F2U. Research Collaboratory for Structural Bioinformatics (n.d.)