% Bibliography for hypothesis h-5e68b4ad
% Title: Autophagosome Maturation Checkpoint Control
% Generated: 2026-06-08T13:47:17Z

@article{pmid41378763,
  title = {NK cell-derived GZMB (granzyme B) suppresses glioblastoma radioresistance by blocking SDC1-mediated autophagosome maturation.},
  author = {Yan J, Feng R, Qin Q, Shen G, Tian M, Ling S, Zhou S, Li F, Xia X, Cao Y, Zeng L, Shao C, Sun X, Zheng W},
  journal = {Autophagy},
  year = {2026},
  pmid = {41378763},
  doi = {10.1080/15548627.2025.2601856},
  url = {https://pubmed.ncbi.nlm.nih.gov/41378763/},
}

@article{pmid41593027,
  title = {SNX16 functions as a nutrient-sensitive regulator of autophagosomal components recycling.},
  author = {Que H, Rong Y},
  journal = {Autophagy},
  year = {2026},
  pmid = {41593027},
  doi = {10.1080/15548627.2026.2622466},
  url = {https://pubmed.ncbi.nlm.nih.gov/41593027/},
}

@article{pmid41630123,
  title = {Downhill Running Blocks the Mitophagic Flux and Autophagosome-Lysosome Fusion in Rat Soleus Muscle.},
  author = {Deng H, Zheng S, Li M, Zhang D, Yang T, Ma R, Xia Z, Shang H},
  journal = {Medicine and science in sports and exercise},
  year = {2026},
  pmid = {41630123},
  doi = {10.1249/MSS.0000000000003955},
  url = {https://pubmed.ncbi.nlm.nih.gov/41630123/},
}

@article{pmid41676542,
  title = {Rapid optogenetic manipulation of autophagy reveals that the nuclear pore complex is a robust autophagy substrate.},
  author = {Mondal P, Cyril A, Parham L, Mamriev D, Wierzbicki I, Shen C, Gonzalez DJ, D'Angelo MA, Towers CG},
  journal = {bioRxiv : the preprint server for biology},
  year = {2026},
  pmid = {41676542},
  doi = {10.64898/2026.02.03.703609},
  url = {https://pubmed.ncbi.nlm.nih.gov/41676542/},
}

@article{pmid40327696,
  title = {Unconventional secretion of PARK7 requires lysosomal delivery via chaperone-mediated autophagy and specialized SNARE complex.},
  author = {["Dash B", "Urano Y", "Mita Y", "Ashida Y", "Hirose R", "Noguchi N"]},
  journal = {Proceedings of the National Academy of Sciences of the United States of America},
  year = {2025},
  pmid = {40327696},
  doi = {10.1073/pnas.2414790122},
}

@article{pmid40533746,
  title = {Exosomes as nanocarriers for brain-targeted delivery of therapeutic nucleic acids: advances and challenges.},
  author = {["Sanadgol N", "Abedi M", "Hashemzaei M", "Kamran Z", "Khalseh R", "Beyer C", "Voelz C"]},
  journal = {Journal of nanobiotechnology},
  year = {2025},
  pmid = {40533746},
  doi = {10.1186/s12951-025-03528-2},
}

@article{pmid40868276,
  title = {Systemic Neurodegeneration and Brain Aging: Multi-Omics Disintegration, Proteostatic Collapse, and Network Failure Across the CNS.},
  author = {Voicu V, Toader C, Șerban M, Covache-Busuioc RA, Ciurea AV},
  journal = {Biomedicines},
  year = {2025},
  pmid = {40868276},
  doi = {10.3390/biomedicines13082025},
  url = {https://pubmed.ncbi.nlm.nih.gov/40868276},
}

@article{pmid41413248,
  title = {CD147 promotes NSCLC metastasis by inducing secretory autophagy-dependent exosome secretion via TRIM56-mediated ubiquitination and degradation of GCN2.},
  author = {Yang J, Liao C, Liang X, Ke Y, Sun Y, Huang M, Qian M, Yang X, Cui H, Bian H, Chen Z, Kong L},
  journal = {Cell death and differentiation},
  year = {2025},
  pmid = {41413248},
  doi = {10.1038/s41418-025-01636-y},
  url = {https://pubmed.ncbi.nlm.nih.gov/41413248/},
}

@article{pmid35435793,
  title = {Acetylation in the regulation of autophagy.},
  author = {Xu Y, Wan W},
  journal = {Autophagy},
  year = {2023},
  pmid = {35435793},
  doi = {10.1080/15548627.2022.2062112},
  url = {https://pubmed.ncbi.nlm.nih.gov/35435793},
}

@article{pmid32924745,
  title = {New insights regarding SNARE proteins in autophagosome-lysosome fusion.},
  author = {Tian X, Teng J, Chen J},
  journal = {Autophagy},
  year = {2021},
  pmid = {32924745},
  doi = {10.1080/15548627.2020.1823124},
  url = {https://pubmed.ncbi.nlm.nih.gov/32924745},
}

@article{pmid33632058,
  title = {C9orf72 ALS-FTD: recent evidence for dysregulation of the autophagy-lysosome pathway at multiple levels.},
  author = {["Beckers J", "Tharkeshwar A", "Van Damme P"]},
  journal = {Autophagy},
  year = {2021},
  pmid = {33632058},
  doi = {10.1080/15548627.2021.1872189},
}

@article{pmid28119433,
  title = {Automated Software System to Promote Anticoagulation and Reduce Stroke Risk: Cluster-Randomized Controlled Trial.},
  author = {["Holt T", "Dalton A", "Marshall T", "Fay M", "Qureshi N", "Kirkpatrick S", "Hislop J", "Lasserson D", "Kearley K", "Mollison J"]},
  journal = {Stroke},
  year = {2017},
  pmid = {28119433},
  doi = {10.1161/STROKEAHA.116.015468},
}

@article{pmid23455425,
  title = {Autophagosomes form at ER-mitochondria contact sites.},
  author = {Hamasaki M, Furuta N, Matsuda A, Nezu A, Yamamoto A, Fujita N, Oomori H, Noda T, Haraguchi T, Hiraoka Y},
  journal = {Nature},
  year = {2013},
  pmid = {23455425},
  doi = {10.1038/nature11910},
  url = {https://pubmed.ncbi.nlm.nih.gov/23455425},
}

@article{pmid23791177,
  title = {Eukaryotic stress granules are cleared by autophagy and Cdc48/VCP function.},
  author = {["Buchan J", "Kolaitis R", "Taylor J", "Parker R"]},
  journal = {Cell},
  year = {2013},
  pmid = {23791177},
  doi = {10.1016/j.cell.2013.05.037},
}

@article{pmid24113031,
  title = {Evolutionarily conserved role and physiological relevance of a STX17/Syx17 (syntaxin 17)-containing SNARE complex in autophagosome fusion with endosomes and lysosomes.},
  author = {["Heged\u0171s K", "Tak\u00e1ts S", "Kov\u00e1cs A", "Juh\u00e1sz G"]},
  journal = {Autophagy},
  year = {2013},
  pmid = {24113031},
  doi = {10.4161/auto.25684},
}

@article{pmid25386247,
  title = {Actinic lichen nitidus.},
  author = {["Blalock T", "Kannan S", "Davis L"]},
  journal = {Dermatology reports},
  year = {2010},
  pmid = {25386247},
  doi = {10.4081/dr.2010.e10},
}