ID: h-6358a464ac
Hypothesis

αvβ3 Integrin-FAK-SYK-CARD9/NF-κB Pathway

**Molecular Mechanism and Rationale**.
🧬 ITGAV/ITGB3 (αvβ3 heterodimer), PTK2 (FAK), SYK, CARD9🩺 neuroinflammation🎯 Composite 58%💱 $0.55▼5.6%proposed
EvidencePending (0%)📖 0 cit🗣 1 debates 3 support 3 oppose
✓ All Quality Gates Passed
Mechanistic 0.60 (15%) Evidence 0.68 (15%) Novelty 0.55 (12%) Feasibility 0.58 (12%) Impact 0.62 (12%) Druggability 0.52 (10%) Safety 0.40 (8%) Competition 0.60 (6%) Data Avail. 0.65 (5%) Reproducible 0.62 (5%) KG Connect 0.50 (8%) 0.580 composite

🧪 Overview

Molecular Mechanism and Rationale

The αvβ3 integrin-FAK-SYK-CARD9/NF-κB pathway represents a novel mechanistic framework linking extracellular matrix recognition to microglial activation and neuroinflammatory responses. This pathway initiates when secreted phosphoprotein 1 (SPP1, also known as osteopontin) binds to the αvβ3 integrin heterodimer through its arginine-glycine-aspartate (RGD) motif. The αvβ3 integrin, composed of ITGAV (αv subunit) and ITGB3 (β3 subunit), serves as a critical mechanosensor that transduces extracellular signals into intracellular cascades. Upon SPP1 binding, conformational changes in the integrin heterodimer expose the cytoplasmic tail of the β3 subunit, creating a platform for focal adhesion kinase (FAK/PTK2) recruitment and activation.

...

🧬 Mechanism

🧬 Curated Mechanism Pathway

Curated pathway from expert analysis

flowchart TD
    A["TREM2-TYROBP<br/>ITAM Phosphorylation"]
    B["SYK Docking<br/>SH2 Domain Binding"]
    C["SYK Autophosphorylation<br/>Full Activation"]
    D["PLCG2<br/>Calcium Signaling"]
    E["PI3K-AKT<br/>Survival Pathway"]
    F["NF-kB Activation<br/>Inflammatory Genes"]
    G["Phagocytosis<br/>Plaque Compaction"]
    A --> B
    B --> C
    C --> D
    C --> E
    C --> F
    D --> G
    E --> G
    style A fill:#1a237e,stroke:#4fc3f7,color:#4fc3f7
    style G fill:#1b5e20,stroke:#81c784,color:#81c784

⚖️ Evidence

⚖️ Evidence Matrix3 supports3 contradicts
Supports
SPP1 RGD motif essential for integrin binding in macrophages
Supports
FAK activation in microglia during neuroinflammation
Supports
NF-κB regulates DAM signature genes
Contradicts
SYK canonically associates with DAP12/TYROBP, not integrins
Contradicts
C1q primarily originates from astrocytes, not microglia
Contradicts
FAK inhibitors have poor CNS penetration
📖 Linked Papers

No linked papers recorded for this hypothesis yet.

🏥 Translation

🧬 3D Protein Structure — ITGAV

No curated PDB or AlphaFold mapping for ITGAV yet. Search RCSB →

🧠 GTEx v10 Brain ExpressionJSON

Median TPM across 13 brain regions for ITGAV/ITGB3 (αvβ3 heterodimer), PTK2 (FAK), SYK, CARD9 from GTEx v10.

Spinal cord cervical c-145.0 Cerebellar Hemisphere31.5 Cerebellum30.4 Substantia nigra23.4 Nucleus accumbens basal ganglia21.4 Caudate basal ganglia20.2 Anterior cingulate cortex BA2418.4 Frontal Cortex BA918.2 Cortex17.9 Amygdala17.3 Putamen basal ganglia17.2 Hippocampus15.3 Hypothalamus14.1median TPM (GTEx v10)

💉 Clinical Trials

No clinical trials data linked to this hypothesis yet.

No curated ClinVar variants loaded for this hypothesis.

Run scripts/backfill_clinvar_variants.py to fetch P/LP/VUS variants.

🔍 Search ClinVar for ITGAV →

No DepMap CRISPR Chronos data found for ITGAV.

Run python3 scripts/backfill_hypothesis_depmap.py to populate.

💰 Estimated Development
Cost
$0
Timeline

🏆 Tournament

🏆 Arenas / Elo

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📊 Market Indicators

7d Trend
Stable
7d Momentum
▼ 0.6%
Volatility
Low
0.0031
Events (7d)
3
Price History
▼5.6%

💾 Resource Usage

LLM Tokens
23,074
$0.0692
Total Cost
$0.0692

🔮 Predictions

🔎 Predictions vs Observations2 predictions · 0 with recorded observations
PredictionPredictedObservedStatusConf
IF adult 5xFAD mice are treated with the selective SYK inhibitor entospletinib (30 mg/kg, twice daily, oral gavage) for 4 weeks starting at 3 months of age, THEN nuclear NF-κB p65 DNA-binding activitySignificant reduction in microglial nuclear NF-κB p65 DNA-binding activity (≥40% decrease) and corresponding downregulation of NF-κB target genes CTSK, CSF1R, a— no observation —pending0.65
IF Cx3cr1-CreER;Itgav flox/flox mice are crossed to 5xFAD background and ITGAV is conditionally deleted in microglia after tamoxifen administration at 2 months of age, THEN microglial CARD9 tyrosine pSignificant reduction in p-CARD9 (Tyr residues) and decreased co-immunoprecipitation of CARD9 with BCL10 and MALT1 in microglia from Itgav-deficient 5xFAD mice,— no observation —pending0.55
🔮 Falsifiable Predictions (2)
pendingconf 65%
IF adult 5xFAD mice are treated with the selective SYK inhibitor entospletinib (30 mg/kg, twice daily, oral gavage) for 4 weeks starting at 3 months of age, THEN nuclear NF-κB p65 DNA-binding activity in isolated microglia will decrease by at least 40% compared to vehicle-treated 5xFAD controls, as
Predicted outcome: Significant reduction in microglial nuclear NF-κB p65 DNA-binding activity (≥40% decrease) and corresponding downregulation of NF-κB target genes CTSK
Falsification: No significant difference in microglial nuclear NF-κB p65 levels between entospletinib-treated and vehicle-treated 5xFAD mice (p > 0.05), indicating SYK is not required for NF-κB activation in this co
pendingconf 55%
IF Cx3cr1-CreER;Itgav flox/flox mice are crossed to 5xFAD background and ITGAV is conditionally deleted in microglia after tamoxifen administration at 2 months of age, THEN microglial CARD9 tyrosine phosphorylation will decrease by at least 50% and CBM complex (CARD9-BCL10-MALT1) association will be
Predicted outcome: Significant reduction in p-CARD9 (Tyr residues) and decreased co-immunoprecipitation of CARD9 with BCL10 and MALT1 in microglia from Itgav-deficient 5
Falsification: CARD9 phosphorylation levels remain unchanged (p > 0.05) or increase following microglial ITGAV deletion, indicating αvβ3 integrin is not upstream of CARD9; preserved CBM complex formation would indic
Metadatasource: v1_phase_c_backfill · origin_type: debate_synthesizer
sourcev1_phase_c_backfill
origin_typedebate_synthesizer
_schema_version1
📊 Evidence Profile
Evidence Balance
+0%
Certainty
0%
Debates
0
Incoming
0
Outgoing
0
0 supporting 0 contradicting 0 neutral
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