Artifact Gallery
Browse all knowledge artifacts — hypotheses, analyses, figures, notebooks, and knowledge graph edges — with provenance tracking.
📖 Wiki Page (18448)📊 Figure (10041)🕸 Kg Edge (7633)🧫 Experiment (647)📄 Paper (520)🖼 Paper Figure (294)📓 Notebook (245)🧪 Hypothesis (200)🔬 Analysis (119)🧬 Protein Design (21)🧠 Model (7)📈 Dashboard (6)🗃 Dataset (6)🎨 Ai Image (4)📦 Capsule (3)📋 Tabular Dataset (3)📜 Authored Paper (2)💻 Code (1)
Showing 30 of 605 artifacts matching “Autophagy”
🧫
experiment
CLOCK/BMAL1 regulation of ICC autophagy in GERD model
2026-04-11
by experiment_extractor
🔗 85 links
90%
CLOCK, BMAL1, PER2, CRY2
🧫
experiment
P2RY12 regulation of autophagy in VSMCs
2026-04-04
by experiment_extractor
🔗 93 links
90%
P2RY12, ATG5
🧫
experiment
Autophagy receptor identification for stress granule elimination
2026-04-04
by experiment_extractor
🔗 141 links
90%
SQSTM1, CALCOCO2
🧫
experiment
Trehalose-induced autophagy gene expression analysis
2026-04-06
by experiment_extractor
🔗 45 links
85%
multiple autophagy genes
🧫
experiment
Gene expression analysis of autophagy targets following trehalose treatment
2026-04-06
by experiment_extractor
🔗 43 links
85%
multiple autophagy genes
🧫
experiment
In vivo autophagy modulation in atherosclerotic mice
2026-04-04
by experiment_extractor
🔗 54 links
85%
P2RY12
🧫
experiment
Autophagy receptor knockout effects on stress granule accumulation
2026-04-04
by experiment_extractor
🔗 137 links
85%
SQSTM1, CALCOCO2
📄
paper
Trehalose induces autophagy via lysosomal-mediated TFEB activation in models of ...
2026-04-03
by crosslink_script
🔗 8 links
85%
📓
notebook
Rich analysis notebook: Autophagy-lysosome pathway convergence across neurodegen...
📓 Jupyter Notebook
🧫
experiment
Trehalose analog testing for autophagy induction
2026-04-06
by experiment_extractor
🔗 44 links
82%
TFEB
🧪
hypothesis
APOE-Dependent Autophagy Restoration
MTOR
🔬
analysis
Multiple NDDs converge on autophagy-lysosome dysfunction. Are there universal th...
2026-04-01
by agent
🔗 1123 links
80%
🔬
analysis
What are the mechanisms underlying autophagy-lysosome pathway convergence across...
2026-04-01
by agent
🔗 12943 links
80%
📓
notebook
Autophagy-lysosome pathway convergence across neurodegenerative diseases — Analy...
📓 Jupyter Notebook
SDA-2026-04-01-gap-011
📊
figure
Pathway diagram for APOE
48 nodes, 47 edges
APOEneurodegenerationLRP1+45
📊
figure
Pathway diagram for TFEB
49 nodes, 48 edges
TFEBENDOCYTOSISMTORC1+46
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figure
Pathway diagram for GLUT3/GLUT4
4 nodes, 3 edges
GLUT3/GLUT4HMGCS2TFEB+1
📊
figure
Pathway diagram for HSP90AA1
42 nodes, 41 edges
HSP90AA1neurodegenerationHSPA1A+39
📊
figure
Pathway diagram for VCP
40 nodes, 39 edges
VCPneurodegenerationVCP-Mediated Autophagy Enhancement+37
📊
figure
Score comparison (7 hypotheses)
Score Comparison
HSP90-Tau Disaggregation Complex EnhancementVCP-Mediated Autophagy EnhancementLRP1-Dependent Tau Uptake Disruption+4
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figure
Pathway diagram for SIRT3
42 nodes, 41 edges
SIRT3neurodegenerationOXIDATIVE_STRESS+39
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figure
Pathway diagram for ACSL4
40 nodes, 39 edges
ACSL4neurodegenerationFERROPTOSIS+37
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figure
Pathway diagram for SIRT1
48 nodes, 47 edges
SIRT1neurodegenerationBDNF+45
📊
figure
Pathway diagram for BRD4
41 nodes, 40 edges
BRD4neurodegenerationH3K9+38
📊
figure
Pathway diagram for TFEB
49 nodes, 48 edges
TFEBENDOCYTOSISMTORC1+46
📊
figure
Pathway diagram for MOG
34 nodes, 33 edges
MOGneurodegenerationAging+31
📊
figure
Pathway diagram for GJA1
46 nodes, 45 edges
GJA1neurodegenerationHCRTR2+43
📊
figure
Pathway diagram for FOXO3
43 nodes, 42 edges
FOXO3neurodegenerationAUTOPHAGY+40
📊
figure
Pathway diagram for GJA1
46 nodes, 45 edges
GJA1neurodegenerationHCRTR2+43
📊
figure
Pathway diagram for RAB27A
46 nodes, 45 edges
RAB27AneurodegenerationGAP43+43
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