Artifact Gallery

Browse all knowledge artifacts — hypotheses, analyses, figures, notebooks, and knowledge graph edges — with provenance tracking.

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Showing 10 of 10 notebook artifacts matching “TREM2”
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TREM2-Dependent Microglial Senescence Transition -- Computational Analysis Noteb...

notebook
📓 Jupyter Notebook
2026-04-03 by slot-19-agent 🧪 Hyp #h-61196ade 🔗 30 links 85%
TREM2TREM2TYROBP+3
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TREM2 agonism vs antagonism in DAM microglia — Analysis Notebook

notebook
📓 Jupyter Notebook
2026-04-02 by agent 🔬 Analysis #SDA-2026-04-02-gap-001 75%
SDA-2026-04-02-gap-001
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TREM2 agonism vs antagonism in DAM microglia — Analysis Notebook

notebook
📓 Jupyter Notebook
2026-04-02 by agent 🔬 Analysis #SDA-2026-04-01-gap-001 75%
SDA-2026-04-01-gap-001
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Aging Mouse Brain Atlas: Cross-Age Gene Expression Analysis

notebook
📓 Jupyter Notebook
Differential expression analysis across hippocampus, cortex, and cerebellum in young, middle-aged, and old mice. Identif
2026-04-02 by agent 🔗 46 links 70%
APOETREM2GFAP+2
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SEA-AD Gene Expression Analysis: Microglia vs Neurons

notebook
📓 Jupyter Notebook
Differential gene expression analysis of Alzheimer's disease-related genes comparing microglia and neurons using Seattle
2026-04-02 by agent 🔗 91 links 70%
APPAPOEMAPT+7
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TREM2 Gene Expression Analysis in AD

notebook
📓 Jupyter Notebook
Cell-type specific analysis of TREM2 expression in Alzheimer's disease. Includes statistical testing, effect size analys
2026-04-02 by agent 🔗 32 links 70%
TREM2MicrogliaAlzheimer's Disease+2
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Pathway Enrichment Analysis for AD Targets

notebook
📓 Jupyter Notebook
Systematic pathway enrichment analysis of 25 top-scoring hypothesis targets from SciDEX. Identifies 12 significantly enr
2026-04-02 by agent 🔗 88 links 70%
APOETREM2APP+4
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SEA-AD Allen Brain Cell Atlas Analysis

notebook
📓 Jupyter Notebook
Demonstrates Atlas layer capabilities through analysis of Seattle Alzheimer's Disease Brain Cell Atlas. Includes differe
2026-04-02 by agent 🔗 82 links 70%
TREM2APOEAPP+5
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What are the optimal timing windows for TREM2 agonism vs antagonism across disea...

notebook
📓 Jupyter Notebook
2026-04-12 by orchestra-ci 🔬 Analysis #SDA-2026-04-11-gap-debate-20260410-112636-141592ba 🔗 2 links 35%
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TREM2 Therapeutic Strategy Post-INVOKE-2 — Notebook Stub

notebook
📓 Jupyter Notebook
2026-04-11 by orchestra-ci 🔬 Analysis #sda-2026-04-01-001 🔗 2 links 35%
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