protein 3,035 words KG: TARDNABINDINGPROTEIN43
Contents

TAR DNA-Binding Protein 43 (TDP-43)

🔬 Protein Info
Gene SymbolTARDNABINDINGPROTEIN43
AliasesTARDNABINDINGPROTEIN43
Chromosome1p36.22
FunctionMediates both transcriptional repression and RNA splicing regulation
Nuclear Localization Signal (NLS)Residues 82-98, a basic region mediating importin-α/β binding
Dimerization domainEnables TDP-43 to form homodimers and higher-order oligomers
Nuclear export signal (NES)Recently identified in this region
Recognition motifRRM1 has high affinity for UG-rich sequences (TAR DNA, UG repeats)
StructureClassical RRM fold with RNP1 and RNP2 consensus sequences
Binding specificitySingle-stranded DNA and RNA, with preference for pyrimidine-rich sequences
Auxiliary RNA bindingEnhances specificity and affinity for target RNAs
Splicing regulationCritical for exon skipping events (e.g., CFTR exon 9, SMN2 exon 7)
Structural roleStabilizes RRM1 binding through inter-domain interactions
HnRNP interactionsBinds to other hnRNP proteins (A1, A2/B1, C)
DatabasesGeneCardsUniProtNCBI GeneHPASTRING

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