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Single-nucleus RNA-seq integration analysis

experiment Created: 2026-04-11 00:50:30 By: experiment_extractor Quality: 85% ✓ SciDEX ID: experiment-exp-bf864e40-c3cf-4450-94ad-9
🧫 Experiment Protocol Gene Expression
🧫 View Full Experiment Page →
Related Entities
DACT1, DAAM1, KCNJ3, KLHDC4, SLC10A7, PPP4R2
Metadata
experiment_typegene_expression
protocolSingle-nucleus RNA sequencing, integration with GWAS results, cell type annotation, differential expression analysis
expected_outcomesCell type-specific annotation of GWAS loci, identification of regulatory mechanisms in relevant brain cell types
success_criteriasignificant association between genetic variants and cell type-specific gene expression
sample_sizeNone
statistical_methodsdifferential gene expression analysis, GWAS-expression integration
p_valueNone
effect_sizeNone
extracted_at2026-04-10T17:50:30.815002
source_pmid41804841
_origin{'type': 'internal', 'url': None, 'tracked_at': '2026-04-11T00:50:30.945584'}
🌍 Provenance Graph 1 nodes, 0 edges

No provenance edges found

Linked Artifacts (98)
mentions📖KCNJ3 Gene80%
mentions📖KCNJ3 Protein80%
related📖KCNJ3 Gene72%
related📖KCNJ3 Protein72%
mentions📖GWAS Findings Hub70%
mentions📖GWAS Findings Hub: Alzheimer's and Parkinson's Dis70%
mentions📖RNA Binding Fox-1 Homolog 1 (RBFOX1)70%
mentions📖RNA Binding Fox-1 Homolog 2 (RBFOX2)70%
mentions📖RNA Binding Fox-3 Homolog (NeuN) (RBFOX3)70%
mentions📖RNA Therapeutics: Investment Landscape Analysis70%
mentions📖RNA Therapeutics for Neurodegeneration Investment Landscape70%
mentions📖RNA Metabolism Dysfunction in Corticobasal Syndrome70%
mentions📖RNA Metabolism Dysregulation in Alzheimer's Disease70%
mentions📖RNA G-quadruplexes in Neurodegeneration70%
mentions📖RNA Granule Dysfunction in Neurodegeneration70%
mentions📖RNA Metabolism in Neurodegeneration70%
mentions📖RNA Metabolism Dysregulation in 4R-Tauopathies70%
mentions📖RNA Metabolism in Alzheimer's Disease70%
mentions📖RNA Metabolism Dysregulation Pathway70%
mentions📖RNA Processing in Neurodegeneration70%
mentions📖RNA Splicing in Neurodegeneration70%
mentions📖RNA Splicing Dysregulation in 4R-Tauopathies: A Comparative 70%
mentions📖RNA Splicing Defects in Neurodegeneration70%
mentions📖RNA Stability and Decay70%
mentions📖RNA-Targeted Therapies in Neurodegeneration70%
mentions📖RNA-Targeted Therapeutics Investment Synthesis70%
mentions📖RNA Toxicity Pathway70%
mentions📖RNA Editing Therapeutics70%
mentions📖RNA-Based Therapeutics for Alzheimer's Disease70%
mentions📖RNA-Targeting Therapies for Neurodegenerative Diseases70%
mentions📖RNA Targeting Therapy for Neurodegeneration70%
mentions📖RNA-Based Therapeutics for Neurodegenerative Diseases70%
mentions📖RNA Interference (RNAi) Therapies for Neurodegeneration70%
related📖GWAS Findings Hub63%
related📖GWAS Findings Hub: Alzheimer's and Parkinson's Dis63%
related📖RNA Binding Fox-1 Homolog 1 (RBFOX1)63%
related📖RNA Binding Fox-1 Homolog 2 (RBFOX2)63%
related📖RNA Binding Fox-3 Homolog (NeuN) (RBFOX3)63%
related📖RNA Therapeutics: Investment Landscape Analysis63%
related📖RNA Therapeutics for Neurodegeneration Investment Landscape63%
related📖RNA Metabolism Dysfunction in Corticobasal Syndrome63%
related📖RNA Metabolism Dysregulation in Alzheimer's Disease63%
related📖RNA G-quadruplexes in Neurodegeneration63%
related📖RNA Granule Dysfunction in Neurodegeneration63%
related📖RNA Metabolism in Neurodegeneration63%
related📖RNA Metabolism Dysregulation in 4R-Tauopathies63%
related📖RNA Metabolism in Alzheimer's Disease63%
related📖RNA Metabolism Dysregulation Pathway63%
related📖RNA Processing in Neurodegeneration63%
related📖RNA Splicing in Neurodegeneration63%
related📖RNA Splicing Dysregulation in 4R-Tauopathies: A Comparative 63%
related📖RNA Splicing Defects in Neurodegeneration63%
related📖RNA Stability and Decay63%
related📖RNA-Targeted Therapies in Neurodegeneration63%
related📖RNA-Targeted Therapeutics Investment Synthesis63%
related📖RNA Toxicity Pathway63%
related📖RNA Editing Therapeutics63%
related📖RNA-Based Therapeutics for Alzheimer's Disease63%
related📖RNA-Targeting Therapies for Neurodegenerative Diseases63%
related📖RNA Targeting Therapy for Neurodegeneration63%
related📖RNA-Based Therapeutics for Neurodegenerative Diseases63%
related📖RNA Interference (RNAi) Therapies for Neurodegeneration63%
mentions📖Agitation in Alzheimer's Disease60%
mentions📖Alzheimer's Disease60%
mentions📖Alzheimer's Disease Genetic Variants60%
mentions📖Alzheimer's Disease vs Parkinson's Disease Compari60%
mentions📖APP Mutations in Alzheimer's Disease60%
mentions📖DLB, Parkinson's Disease, and Alzheimer's Disease:60%
mentions📖Early-Onset Alzheimer's Disease (EOAD)60%
mentions📖Investment Landscape: Alzheimer's Disease60%
mentions📖Preclinical Alzheimer's Disease60%
mentions📖Prodromal Alzheimer's Disease60%
mentions📖PSEN1 Mutations in Alzheimer's Disease60%
mentions📖PSEN2 Mutations in Alzheimer's Disease60%
mentions📖Sporadic vs Familial Alzheimer's Disease: Comprehensive60%
mentions📖TREM2 Variants in Alzheimer's Disease60%
mentions📖cell-types60%
mentions📖Oligodendrocytes60%
mentions📖entities-oligodendrocytes60%
related📖Alzheimer's Disease60%
related📖Agitation in Alzheimer's Disease54%
related📖Alzheimer's Disease54%
related📖Alzheimer's Disease Genetic Variants54%
related📖Alzheimer's Disease vs Parkinson's Disease Compari54%
related📖APP Mutations in Alzheimer's Disease54%
related📖DLB, Parkinson's Disease, and Alzheimer's Disease:54%
related📖Early-Onset Alzheimer's Disease (EOAD)54%
related📖Investment Landscape: Alzheimer's Disease54%
related📖Preclinical Alzheimer's Disease54%
related📖Prodromal Alzheimer's Disease54%
related📖PSEN1 Mutations in Alzheimer's Disease54%
related📖PSEN2 Mutations in Alzheimer's Disease54%
related📖Sporadic vs Familial Alzheimer's Disease: Comprehensive54%
related📖TREM2 Variants in Alzheimer's Disease54%
related📖cell-types54%
related📖Oligodendrocytes54%
related📖entities-oligodendrocytes54%
related🧫Summary-based Mendelian randomization analysis37%