SciDEX — Dataset Registry

UK Biobank AD GWAS

Registered via Biomni parity pipeline. URL: https://www.ukbiobank.ac.uk/ | Version: 2024-12 | Institution: UK Biobank

neurodegeneration 📖 0 citations ★ N/A

ID: ukb-ad-gwas · Created: 2026-04-24

IGAP GWAS Summary Statistics

Registered via Biomni parity pipeline. URL: https://www.niagads.org/node/42221 | Version: 2024-06 | Institution: NIAGADS

neurodegeneration 📖 0 citations ★ N/A

ID: gwas-ad-igap · Created: 2026-04-24

CellChatDB Ligand-Receptor Database

Registered via Biomni parity pipeline. URL: https://github.com/sqjin/CellChat | Version: 2024-06 | Institution: CUHK

neurodegeneration 📖 0 citations ★ N/A

ID: cellchatdb · Created: 2026-04-24

Alzheimer's Clinical Trial Tracker

Registered via Biomni parity pipeline. URL: https://www.alz.org/alzheimers-dementia/treatments/treatments-in-development | Version: 2026-04 | Institution: Alzheimer's Association

neurodegeneration 📖 0 citations ★ N/A

ID: ad-trial-tracker · Created: 2026-04-24

ClinicalTrials.gov AD Trials

Registered via Biomni parity pipeline. URL: https://clinicaltrials.gov/api/query/study_fields | Version: 2026-04 | Institution: NIH/NLM

neurodegeneration 📖 0 citations ★ N/A

ID: clinicaltrials-gov-ad · Created: 2026-04-24

WRAP Biomarker Cohort

Registered via Biomni parity pipeline. URL: https://wrap.wisc.edu/ | Version: 2024-06 | Institution: UW-Madison

neurodegeneration 📖 0 citations ★ N/A

ID: wrap-biomarker · Created: 2026-04-24

ADNI Biomarker Dataset

Registered via Biomni parity pipeline. URL: http://adni.loni.usc.edu/data-samples/adni-data/ | Version: 2024-12 | Institution: UCSF/Loni UCLA

neurodegeneration 📖 0 citations ★ N/A

ID: adni-biomarker · Created: 2026-04-24

NACC Uniform Data Set

Registered via Biomni parity pipeline. URL: https://naccdata.org/data-access/uniform-data-set | Version: 2024-06 | Institution: NACC/UW

neurodegeneration 📖 0 citations ★ N/A

ID: nacc-uniform · Created: 2026-04-24

ADNI Longitudinal Clinical Data

Registered via Biomni parity pipeline. URL: http://adni.loni.usc.edu/data-samples/adni-data/ | Version: 2024-12 | Institution: UCSF/Loni UCLA

neurodegeneration 📖 0 citations ★ N/A

ID: adni-longitudinal · Created: 2026-04-24

OpenTargets AD Genetic Associations

Registered via Biomni parity pipeline. URL: https://platform.opentargets.org/disease/MONDO_0004975/associations | Version: 2026-04 | Institution: OpenTargets

neurodegeneration 📖 0 citations ★ N/A

ID: opentargets-ad · Created: 2026-04-24

GWAS Catalog AD Associations

Registered via Biomni parity pipeline. URL: https://www.ebi.ac.uk/gwas/efotraits/EFO_0000249 | Version: 2026-04 | Institution: NHGRI-EBI

neurodegeneration 📖 0 citations ★ N/A

ID: gwas-catalog-ad · Created: 2026-04-24

ROSMAP Proteomics

Registered via Biomni parity pipeline. URL: https://www.synapse.org/#!Synapse:syn3606086 | Version: 2024-06 | Institution: Rush University

neurodegeneration 📖 0 citations ★ N/A

ID: rosmap-proteomics · Created: 2026-04-24

AMP-AD Targeted Proteomics

Registered via Biomni parity pipeline. URL: https://www.synapse.org/#!Synapse:syn21587433 | Version: 2024-03 | Institution: Banner/Army MRT

neurodegeneration 📖 0 citations ★ N/A

ID: amp-ad-proteomics · Created: 2026-04-24

AMP-AD Mayo RNA-seq

Registered via Biomni parity pipeline. URL: https://www.synapse.org/#!Synapse:syn3157744 | Version: 2024-03 | Institution: Mayo Clinic

neurodegeneration 📖 0 citations ★ N/A

ID: amp-ad-mayo · Created: 2026-04-24

AMP-AD MSBB RNA-seq

Registered via Biomni parity pipeline. URL: https://www.synapse.org/#!Synapse:syn3157743 | Version: 2024-03 | Institution: Mount Sinai

neurodegeneration 📖 0 citations ★ N/A

ID: amp-ad-msbb · Created: 2026-04-24

CZ CellxGene AD Collections

Registered via Biomni parity pipeline. URL: https://cellxgene.cziscience.com/ | Version: 2025-01 | Institution: CZIS

neurodegeneration 📖 0 citations ★ N/A

ID: cellxgene-ad · Created: 2026-04-24

ABC Atlas Whole Brain Spatial

Registered via Biomni parity pipeline. URL: https://knowledge.brain-map.org/spatialdata | Version: 2025-01 | Institution: Allen Institute

neurodegeneration 📖 0 citations ★ N/A

ID: abc-atlas-spatial · Created: 2026-04-24

SEA-AD Spatial Transcriptomics

Registered via Biomni parity pipeline. URL: https://cellxgene.cziscience.com/collections/1ca90a40-d852-4f62-8ed2-68886a6a33d4 | Version: 2024-12 | Institution: University of Washington

neurodegeneration 📖 0 citations ★ N/A

ID: seaad-spatial · Created: 2026-04-24

RefSeq MAPT Transcripts

Registered via Biomni parity pipeline. URL: https://www.ncbi.nlm.nih.gov/gene/4137 | Version: 2024-06 | Institution: NCBI

neurodegeneration 📖 0 citations ★ N/A

ID: refseq-mapt · Created: 2026-04-24

Ensembl MAPT Gene and Transcript Annotations

Registered via Biomni parity pipeline. URL: https://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000186868 | Version: 112 | Institution: EBI/Sanger

neurodegeneration 📖 0 citations ★ N/A

ID: ensembl-mapt · Created: 2026-04-24

GMrepo Parkinson's Disease Collection

Registered via Biomni parity pipeline. URL: https://gmrepo.humangut.info/ | Version: 2024-01 | Institution: HKUST

neurodegeneration 📖 0 citations ★ N/A

ID: gmrepo-pd · Created: 2026-04-24

Gut Microbiome in PD Cohort

Registered via Biomni parity pipeline. URL: https://www.ebi.ac.uk/ena/browser/view/PRJNA385613 | Version: 2024-06 | Institution: Various

neurodegeneration 📖 0 citations ★ N/A

ID: gut-pd-cohort · Created: 2026-04-24

ROSMAP RNA-seq

Registered via Biomni parity pipeline. URL: https://www.synapse.org/#!Synapse:syn3388564 | Version: 2024-06 | Institution: Rush University

neurodegeneration 📖 0 citations ★ N/A

ID: rosmap-rnaseq · Created: 2026-04-24

SEA-AD snRNA-seq

Registered via Biomni parity pipeline. URL: https://cellxgene.cziscience.com/collections/1ca90a40-d852-4f62-8ed2-68886a6a33d4 | Version: 2024-12 | Institution: University of Washington

neurodegeneration 📖 0 citations ★ N/A

ID: seaad-snRNAseq · Created: 2026-04-24

PDB Alpha-Synuclein Fibril Structures

Registered via Biomni parity pipeline. URL: https://www.rcsb.org/structure/6CU7 | Version: 2024-06 | Institution: RCSB

neurodegeneration 📖 0 citations ★ N/A

ID: pdb-syn-fibril · Created: 2026-04-24

AlphaFold2 Alpha-Synuclein Fibril Structure

Registered via Biomni parity pipeline. URL: https://alphafold.ebi.ac.uk/entry/P37840 | Version: 2024-01 | Institution: DeepMind/EMBL-EBI

neurodegeneration 📖 0 citations ★ N/A

ID: alphafold-syn · Created: 2026-04-24

1000 Genomes EUR LD Reference

Registered via Biomni parity pipeline. URL: https://ftp.ncbi.nlm.nih.gov/1000genomes/ftp/release/20130502/ | Version: Phase 3 | Institution: NCBI/IGSR

neurodegeneration 📖 0 citations ★ N/A

ID: ldref-eur · Created: 2026-04-24

IGAP GWAS Fine-mapping Input

Registered via Biomni parity pipeline. URL: https://www.niagads.org/node/42221 | Version: 2024-06 | Institution: NIAGADS

neurodegeneration 📖 0 citations ★ N/A

ID: igap-finemapping · Created: 2026-04-24

OT-AD Target Ranking Benchmark Answer Key

Ground-truth answer key for the OT-AD Target Ranking benchmark (bench_ot_ad_target_ranking_v1). Each row is a gene symbol; is_top10pct indicates whether the gene falls in the top 10% of Open Targets P

neurodegeneration 📖 0 citations ★ 0.59

ID: ds-83b31ef18d49 · Created: 2026-04-11

Dataset Registry

All Datasets (29) (filtered: neurodegeneration)