NPM1 knockout tumor progression study in syngeneic mice

Validation Score: 0.900 Price: $0.50 cancer syngeneic mice with subcutaneous tumor xenografts Status: proposed

What This Experiment Tests

Validation experiment designed to validate causal mechanisms targeting NPM1 in syngeneic mice with subcutaneous tumor xenografts. Primary outcome: tumor progression and survival rates

Description

Subcutaneous inoculation of Npm1-deficient tumor cells into syngeneic mice to examine the roles of NPM1 in tumor progression and tumor microenvironment reprogramming. The study evaluated tumor growth kinetics, survival of tumor-bearing mice, immune cell infiltration patterns, and activation states using comprehensive flow cytometry, CyTOF, immunohistochemistry staining, and RNA-seq analysis. Loss of NPM1 was shown to inhibit tumor progression and enhance survival, with increased CD8+ T cell infiltration and activation alongside reduced presence of immunosuppressive cells.

TARGET GENE
MODEL SYSTEM
syngeneic mice with subcutaneous tumor xenografts
ESTIMATED COST
$0
TIMELINE
0 months
PATHWAY
antigen presentation pathway, MHC-I and MHC-II presentation
SOURCE
extracted_from_pmid_39402629
PRIMARY OUTCOME
tumor progression and survival rates

Scoring Dimensions

Info Gain 0.00 (25%) Feasibility 0.00 (20%) Hyp Coverage 0.00 (20%) Cost Effect. 0.00 (15%) Novelty 0.00 (10%) Ethical Safety 0.00 (10%) 0.900 composite

📖 Wiki Pages

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Protocol

Subcutaneous inoculation of Npm1-deficient tumor cells followed by monitoring tumor growth, survival analysis, and comprehensive immune profiling using CyTOF, flow cytometry, immunohistochemistry, and RNA-seq

Expected Outcomes

NPM1 deficiency would affect tumor progression and immune microenvironment

Success Criteria

Significant changes in tumor growth, survival, and immune cell populations

Related Hypotheses (1)

Nucleolar Stress Response Normalization0.378

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