ID: h-e3557d75fa56
Hypothesis

Tau dysfunction destabilizes labile pool

Loss of tau function (as in disease states) selectively destabilizes the labile microtubule population, disrupting axonal transport while sparing stable domains.
🧬 MAPT🩺 neurodegeneration🎯 Composite 75%💱 $0.55▼6.8%proposed
EvidenceStrong (70%)📖 6 cit🗣 1 debates 6 support 2 oppose
Mechanistic 0.80 (15%) Evidence 0.75 (15%) Novelty 0.75 (12%) Feasibility 0.75 (12%) Impact 0.00 (12%) Druggability 0.00 (10%) Safety 0.00 (8%) Competition 0.00 (6%) Data Avail. 0.40 (5%) Reproducible 0.71 (5%) KG Connect 0.24 (8%) 0.750 composite
🏆 ChallengeSolve: Tau dysfunction destabilizes labile pool$125K →

🧪 Overview

Loss of tau function (as in disease states) selectively destabilizes the labile microtubule population, disrupting axonal transport while sparing stable domains

Prediction: Tau-targeted interventions will selectively impair transport of organelles requiring labile microtubules (mitochondria, endosomes) while sparing lysosome transport

🧬 Mechanism

🧬 Curated Mechanism Pathway

Curated pathway from expert analysis

flowchart TD
    A["MAPT/Tau Protein<br/>Microtubule Stabilizer"]
    B["CDK5/GSK3B Activation<br/>Kinase Dysregulation"]
    C["Tau Hyperphosphorylation<br/>Ser396/Thr231/Ser202"]
    D["Tau Detachment<br/>Microtubule Destabilized"]
    E["Tau Oligomers<br/>Paired Helical Filaments"]
    F["Neurofibrillary Tangles<br/>Intraneuronal Inclusions"]
    G["Axonal Transport Failure<br/>Synaptic Dysfunction"]
    H["Neurodegeneration<br/>Tauopathy Spread"]
    A --> B
    B --> C
    C --> D
    D --> E
    E --> F
    D --> G
    G --> H
    F --> H
    style A fill:#1a237e,stroke:#4fc3f7,color:#4fc3f7
    style C fill:#b71c1c,stroke:#ef9a9a,color:#ef9a9a
    style H fill:#b71c1c,stroke:#ef9a9a,color:#ef9a9a

⚖️ Evidence

⚖️ Evidence Matrix6 supports1 contradicts
Supports
Loss of tau function (as in disease states) selectively destabilizes the labile microtubule population, disrupting axonal transport while sparing stable domains
Supports
MAPT mutations, tauopathy, and mechanisms of neurodegeneration.
Lab Invest2019PMID:30742061medium
Supports
Endolysosomal impairment by binding of amyloid beta or MAPT/Tau to V-ATPase and rescue via the HYAL-CD44 axis in Alzheimer disease.
Autophagy2023PMID:36843263medium
Supports
Tau-targeting antisense oligonucleotide MAPT(Rx) in mild Alzheimer's disease: a phase 1b, randomized, placebo-controlled trial.
Nat Med2023PMID:37095250medium
Supports
ELAVL4, splicing, and glutamatergic dysfunction precede neuron loss in MAPT mutation cerebral organoids.
Cell2021PMID:34314701medium
Supports
The six brain-specific TAU isoforms and their role in Alzheimer's disease and related neurodegenerative dementia syndromes.
Alzheimers Dement2024PMID:38556838medium
Contradicts
Alzheimer Disease: An Update on Pathobiology and Treatment Strategies.
📖 Linked Papers

No linked papers recorded for this hypothesis yet.

🏥 Translation

🧬 3D Protein Structure — MAPT

🧬 PDB 5O3L Click to expand

Experimental structure from RCSB PDB | Powered by Mol*

🧠 GTEx v10 Brain ExpressionJSON

Median TPM across 13 brain regions for MAPT from GTEx v10.

Cerebellum209 Cerebellar Hemisphere199 Cortex152 Frontal Cortex BA9146 Anterior cingulate cortex BA24101 Hypothalamus86.4 Amygdala73.5 Nucleus accumbens basal ganglia72.2 Hippocampus72.1 Caudate basal ganglia64.7 Putamen basal ganglia58.1 Substantia nigra56.8 Spinal cord cervical c-149.2median TPM (GTEx v10)

💉 Clinical Trials (5)Relevance: 85%

0
Active
0
Completed
0
Total Enrolled
PHASE1
Highest Phase
COMPLETED·NCT06584656 · Universidad de Granada
Healthy Aging Cognitive Function 1, Social Cerebrovascular Circulation
Aerobic exercise condition Resistance exercise condition
COMPLETED·NCT01850238 · Axon Neuroscience SE
Alzheimer Disease
AADvac1 Placebo
RECRUITING·NCT04906863 · Columbia University
Dementia, Early Onset
Blood draw Neurocognitive testing Medical questionnaire
COMPLETED·NCT04413344 · Kyoto University
Familial Alzheimer Disease (FAD) PSEN1 Mutation
Bromocriptine Mesilate Placebos
COMPLETED·NCT03978052 · Parc de Salut Mar
Alzheimer Disease Cognitive Decline
EGCG Placebo EGCG Healthy lifestyle recommendations

No curated ClinVar variants loaded for this hypothesis.

Run scripts/backfill_clinvar_variants.py to fetch P/LP/VUS variants.

🔍 Search ClinVar for MAPT →

No DepMap CRISPR Chronos data found for MAPT.

Run python3 scripts/backfill_hypothesis_depmap.py to populate.

🏆 Tournament

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📊 Market Indicators

7d Trend
Stable
7d Momentum
▼ 0.4%
Volatility
High
0.1386
Events (7d)
2
Price History
▼6.8%

💾 Resource Usage

No resource usage or linked notebooks recorded for this hypothesis yet.

🔮 Predictions

🔎 Predictions vs Observations2 predictions · 0 with recorded observations
PredictionPredictedObservedStatusConf
IF CRISPR/Cas9-mediated MAPT knockout is performed in human iPSC-derived cortical neurons, THEN the mean anterograde velocity of mitochondria in distal axons will decrease by at least 40% relative to Selective ≥40% decrease in mitochondrial transport without significant change in lysosome transport.— no observation —pending0.60
IF a selective labile microtubule stabilizer (e.g., 10 nM epothilone D) is applied to MAPT knockout neurons, THEN the mitochondrial transport deficit will be rescued to ≥80% of wild-type velocity withRestoration of mitochondrial transport velocity to ≥80% of wild-type levels after epothilone D.— no observation —pending0.55
🔮 Falsifiable Predictions (2)
pendingconf 60%
IF CRISPR/Cas9-mediated MAPT knockout is performed in human iPSC-derived cortical neurons, THEN the mean anterograde velocity of mitochondria in distal axons will decrease by at least 40% relative to wild-type controls within 10 days, while the velocity of lysosomes will not change by more than 15%.
Predicted outcome: Selective ≥40% decrease in mitochondrial transport without significant change in lysosome transport.
Falsification: If both mitochondrial and lysosome transport are reduced by ≥30% or if mitochondrial transport reduction is <30%, the hypothesis of selective destabilization of labile microtubules is falsified.
pendingconf 55%
IF a selective labile microtubule stabilizer (e.g., 10 nM epothilone D) is applied to MAPT knockout neurons, THEN the mitochondrial transport deficit will be rescued to ≥80% of wild-type velocity within 48 h of treatment.
Predicted outcome: Restoration of mitochondrial transport velocity to ≥80% of wild-type levels after epothilone D.
Falsification: If mitochondrial transport remains <50% of wild-type after 48 h of epothilone D treatment, the hypothesis that labile microtubule destabilization underlies the transport deficit is falsified.
Metadatasource: v1_phase_c_backfill · origin_type: gap_debate
sourcev1_phase_c_backfill
origin_typegap_debate
_schema_version1
📊 Evidence Profile
Evidence Balance
+0%
Certainty
0%
Debates
0
Incoming
0
Outgoing
0
0 supporting 0 contradicting 0 neutral
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