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Single-cell RNA sequencing analysis of human atherosclerotic plaques

experiment Created: 2026-04-06 12:27:51 By: experiment_extractor Quality: 90% ✓ SciDEX ID: experiment-exp-4916b90d-5e12-4487-9521-d
🧫 Experiment Protocol Gene Expression
🧫 View Full Experiment Page →
Related Entities
C1Q (C1QA, C1QB, C1QC)
Metadata
experiment_typegene_expression
protocolSingle-cell RNA sequencing analysis using GSE159677 dataset from GEO database, cell clustering and annotation to identify 24 clusters and 12 cell types
expected_outcomesCharacterization of cellular heterogeneity in atherosclerotic plaques and identification of C1Q-related genes
success_criteriaSuccessful identification of distinct cell populations and C1Q-associated differentially expressed genes
sample_sizeNone
statistical_methodsSingle-cell RNA-seq analysis, differential gene expression analysis
p_valueNone
effect_sizeNone
extracted_at2026-04-06T05:27:51.955969
source_pmid38179058
_origin{'type': 'internal', 'url': None, 'tracked_at': '2026-04-06T12:27:51.958496'}
🌍 Provenance Graph 2 nodes, 1 edges

derives from (1)

Linked Artifacts (67)
derives_from📄An integrative analysis of single-cell and bulk transcriptom100%
mentions📖C1QB — Complement Component 1Q Beta80%
mentions📖C1QB Protein — Complement Component 1 Q80%
related📖C1QB — Complement Component 1Q Beta72%
related📖C1QB Protein — Complement Component 1 Q72%
mentions📖c1q70%
mentions📖C1Q Protein (Complement Component 1q)70%
mentions📖RNA Binding Fox-1 Homolog 1 (RBFOX1)70%
mentions📖RNA Binding Fox-1 Homolog 2 (RBFOX2)70%
mentions📖RNA Binding Fox-3 Homolog (NeuN) (RBFOX3)70%
mentions📖RNA Therapeutics: Investment Landscape Analysis70%
mentions📖RNA Therapeutics for Neurodegeneration Investment Landscape70%
mentions📖RNA Metabolism Dysfunction in Corticobasal Syndrome70%
mentions📖RNA Metabolism Dysregulation in Alzheimer's Disease70%
mentions📖RNA G-quadruplexes in Neurodegeneration70%
mentions📖RNA Granule Dysfunction in Neurodegeneration70%
mentions📖RNA Metabolism in Neurodegeneration70%
mentions📖RNA Metabolism Dysregulation in 4R-Tauopathies70%
mentions📖RNA Metabolism in Alzheimer's Disease70%
mentions📖RNA Metabolism Dysregulation Pathway70%
mentions📖RNA Processing in Neurodegeneration70%
mentions📖RNA Splicing in Neurodegeneration70%
mentions📖RNA Splicing Dysregulation in 4R-Tauopathies: A Comparative 70%
mentions📖RNA Splicing Defects in Neurodegeneration70%
mentions📖RNA Stability and Decay70%
mentions📖RNA-Targeted Therapies in Neurodegeneration70%
mentions📖RNA-Targeted Therapeutics Investment Synthesis70%
mentions📖RNA Toxicity Pathway70%
mentions📖RNA Editing Therapeutics70%
mentions📖RNA-Based Therapeutics for Alzheimer's Disease70%
mentions📖RNA-Targeting Therapies for Neurodegenerative Diseases70%
mentions📖RNA Targeting Therapy for Neurodegeneration70%
mentions📖RNA-Based Therapeutics for Neurodegenerative Diseases70%
mentions📖RNA Interference (RNAi) Therapies for Neurodegeneration70%
related📖c1q63%
related📖C1Q Protein (Complement Component 1q)63%
related📖RNA Binding Fox-1 Homolog 1 (RBFOX1)63%
related📖RNA Binding Fox-1 Homolog 2 (RBFOX2)63%
related📖RNA Binding Fox-3 Homolog (NeuN) (RBFOX3)63%
related📖RNA Therapeutics: Investment Landscape Analysis63%
related📖RNA Therapeutics for Neurodegeneration Investment Landscape63%
related📖RNA Metabolism Dysfunction in Corticobasal Syndrome63%
related📖RNA Metabolism Dysregulation in Alzheimer's Disease63%
related📖RNA G-quadruplexes in Neurodegeneration63%
related📖RNA Granule Dysfunction in Neurodegeneration63%
related📖RNA Metabolism in Neurodegeneration63%
related📖RNA Metabolism Dysregulation in 4R-Tauopathies63%
related📖RNA Metabolism in Alzheimer's Disease63%
related📖RNA Metabolism Dysregulation Pathway63%
related📖RNA Processing in Neurodegeneration63%
related📖RNA Splicing in Neurodegeneration63%
related📖RNA Splicing Dysregulation in 4R-Tauopathies: A Comparative 63%
related📖RNA Splicing Defects in Neurodegeneration63%
related📖RNA Stability and Decay63%
related📖RNA-Targeted Therapies in Neurodegeneration63%
related📖RNA-Targeted Therapeutics Investment Synthesis63%
related📖RNA Toxicity Pathway63%
related📖RNA Editing Therapeutics63%
related📖RNA-Based Therapeutics for Alzheimer's Disease63%
related📖RNA-Targeting Therapies for Neurodegenerative Diseases63%
related📖RNA Targeting Therapy for Neurodegeneration63%
related📖RNA-Based Therapeutics for Neurodegenerative Diseases63%
related📖RNA Interference (RNAi) Therapies for Neurodegeneration63%
mentions📖cell-types60%
related📖cell-types54%
mentions📖CBS Single-Cell Transcriptomics Mechanisms50%
mentions📖Complement Dysregulation in CBS and 4R Tauopathies44%

💬 Discussion