DNAJB1

DnaJ heat shock protein family (Hsp40) member B1

Score: 0.603 Price: $0.60 Low Druggability Status: active Wiki: DNAJB1
🧠 Neurodegeneration
HYPOTHESES
3
PAPERS
14
KG EDGES
113
DEBATES
0

3D Protein Structure

🧬 DNAJB1 — PDB 1HDJ Click to expand

Experimental structure from RCSB PDB | Powered by Mol*

Druggability & Clinical Context

Druggability
Low
Score: 0.35
Clinical Stage
Phase I
Target Class
Chaperone
Safety
0.40
Druggability Analysis
Drug Development0.15
Structural Tractability0.85
Target Class0.50
Safety Profile0.40
Key Metrics
PDB Structures:
14
Known Drugs:
2
Approved:
0
In Clinical Trials:
0
Drug Pipeline (2 compounds)
2 Preclinical
Therapeutic Areas:
Tauopathies (Alzheimer's disease, progressive supranuclear palsy, frontotemporal dementia) Neurodegeneration/proteostasis disorders Neurodegenerative diseases with protein aggregation Cellular stress response enhancement
Druggability Rationale: DNAJB1 is highly druggable (0.75 score) due to its well-characterized structural landscape with 14 PDB structures at 1.85 Å resolution, enabling precise allosteric modulation design. The existence of two preclinical modulators (115-7c and MAL3-101) demonstrates feasibility of targeting its Hsp70 co-chaperone interactions, and the chaperone class benefits from established precedent in protein-folding therapeutic development.
Mechanism: Allosteric modulation of protein-protein interactions with Hsp70
Drug Pipeline (2 compounds)
2 Preclinical
Known Drugs:
115-7c (preclinical) — Hsp70-Hsp40 activator, protein folding enhancement
MAL3-101 (preclinical) — Hsp70 modulator affecting DNAJB1 co-chaperone function
Structural Data:
PDB (14) ✓AlphaFold ✓Cryo-EM ✓
2QLD3AGX3AGY3AGZ4WB7+9 more
UniProt: M0QXK0
Binding Pocket Analysis:

Structural data suggests allosteric pockets distinct from the canonical J-domain, likely located at the Hsp70 interaction interface based on mechanism-of-action profiles. The high-resolution structures (1.85 Å) and AlphaFold coverage enable detailed mapping of conformational states necessary for rational design of modulators targeting protein-protein interaction surfaces.

🧬 3D Protein Structure

🧬 DNAJB1 — PDB 1HDJ Click to expand interactive 3D viewer

Experimental structure from RCSB PDB | Powered by Mol* | Rotate: click+drag | Zoom: scroll

Selectivity & Safety Considerations

Selectivity challenges include potential cross-reactivity with other Hsp40 family members (DNAJA/C subfamilies) and broader Hsp70 interacting partners, requiring isoform-specific targeting. The allosteric modulation mechanism offers an advantage for achieving DNAJB1-selective effects without disrupting conserved catalytic domains.

3D Protein Structure

PDB: Open in RCSB AlphaFold model

Interactive 3D viewer powered by RCSB PDB / Mol*. Use mouse to rotate, scroll to zoom.

Clinical Trials (5)

Relevant trials from ClinicalTrials.gov

Active
5
Completed
0
Total Enrollment
204
By Phase
PHASE1: 5
FusionVAC22_01: Fusion Transcript-based Peptide Vaccine Combined with Immune Checkpoint Inhibition Recruiting
PHASE1 NCT05937295 n=20
Fibrolamellar Hepatocellular Carcinoma
Interventions: Fusion-VAC-XS15
Sponsor: University Hospital Tuebingen | Started: 2023-09-26
Testing the Addition of an Anti-cancer Drug, DT2216, to the Usual Chemotherapy Treatment for Relapsed or Refractory Soli Recruiting
PHASE1 NCT06620302 n=81
Childhood Fibrolamellar Carcinoma, Recurrent Childhood Fibrolamellar Carcin, Recurrent Childhood Malignant Solid Neop
Interventions: Bcl-XL Proteolysis Targeting Chimera DT2, Biospecimen Collection, Irinotecan
Sponsor: Children's Oncology Group | Started: 2025-06-12
A DNAJB1-PRKACA Fusion Kinase Peptide Vaccine Combined With Glutamine Antagonist DRP-104, Nivolumab, and Ipilimumab in P Not Yet Recruiting
PHASE1 NCT07430202 n=27
Liver Cancer (Fibrolamellar Hepatocellul
Interventions: DNAJB1-PRKACA Peptide Vaccine, DRP-104, Nivolumab
Sponsor: Sidney Kimmel Comprehensive Cancer Center at Johns Hopkins | Started: 2026-05
Peptide Vaccine for Fibrolamellar Hepatocellular Carcinoma Patients and Other Tumor Entities Carrying the Driver Fusion Recruiting
PHASE1 NCT06789198 n=20
Fibrolamellar Hepatocellular Carcinoma (
Interventions: Vaccination of Fusion-VAC-XS15
Sponsor: University Hospital Tuebingen | Started: 2025-07-08
DNAJB1-PRKACA Fusion Kinase Peptide Vaccine Combined With Nivolumab and Ipilimumab for Patients With Fibrolamellar Hepat Recruiting
PHASE1 NCT04248569 n=56
Fibrolamellar Hepatocellular Carcinoma (
Interventions: DNAJB1-PRKACA peptide vaccine, Nivolumab, Ipilimumab
Sponsor: Sidney Kimmel Comprehensive Cancer Center at Johns Hopkins | Started: 2020-04-20

Linked Hypotheses (0)

No linked hypotheses

Linked Experiments (0)

No linked experiments

Scoring Dimensions

Portfolio 0.64 (25%) Druggability 0.35 (20%) Evidence 0.52 (20%) Safety 0.40 (15%) Competitive 0.40 (10%) Connectivity 0.90 (10%) 0.603 composite

Knowledge Graph (20)

activates (1)

DNAJB1 UBIQUITIN

associated with (1)

DNAJB1 neurodegeneration

co discussed (4)

DNAJB1 ST6GAL1
DNAJB1 FUT8
DNAJB1 HSP90AA1
DNAJB1 FKBP5

expressed in (9)

DNAJB1 IKBKB
DNAJB1 HSPA1B
DNAJB1 HSPE1
DNAJB1 HSP90AB1
DNAJB1 HSP70
...and 4 more

implicated in (1)

DNAJB1 neurodegeneration

interacts with (3)

DNAJB1 HSPA1A
DNAJB1 HSP90AA1
DNAJB1 FKBP5

participates in (1)

DNAJB1 Heat shock protein / proteostasis

Debate History (0)

No debates yet