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SHANK1 — SH3 and Multiple Ankyrin Repeat Domains 3
SHANK1 — SH3 and Multiple Ankyrin Repeat Domains 3
Introduction
<table class="infobox infobox-gene">
<tr>
<th class="infobox-header" colspan="2">SHANK1 — SH3 and Multiple Ankyrin Repeat Domains 3</th>
</tr>
<tr>
<td class="label">Symbol</td>
<td>SHANK1</td>
</tr>
<tr>
<td class="label">Full Name</td>
<td>SH3 and Multiple Ankyrin Repeat Domains 3</td>
</tr>
<tr>
<td class="label">Chromosomal Location</td>
<td>19q13.33</td>
</tr>
<tr>
<td class="label">NCBI Gene ID</td>
<td>50856</td>
</tr>
<tr>
<td class="label">OMIM ID</td>
<td>603384</td>
</tr>
<tr>
<td class="label">Ensembl ID</td>
<td>ENSG00000161681</td>
</tr>
<tr>
<td class="label">UniProt ID</td>
<td>Q9Y3I0</td>
</tr>
<tr>
<td class="label">Strategy</td>
<td>Drug/Approach</td>
</tr>
<tr>
<td class="label">Gene therapy</td>
<td>AAV-Shank1/2/3</td>
</tr>
<tr>
<td class="label">Small molecule</td>
<td>Spine plasticity enhancers</td>
</tr>
<tr>
<td class="label">Peptide</td>
<td>PSD scaffolds</td>
</tr>
<tr>
<td class="label">KG Connections</td>
<td><a href="/atlas" style="color:#4fc3f7">1 edges</a></td>
</tr>
</table>
Shank1 — Sh3 And Multiple Ankyrin Repeat Domains 3 is an important component in the neurobiology of neurodegenerative diseases. This page provides detailed information about its structure, function, and role in disease processes.
Overview
...SHANK1 — SH3 and Multiple Ankyrin Repeat Domains 3
Introduction
<table class="infobox infobox-gene">
<tr>
<th class="infobox-header" colspan="2">SHANK1 — SH3 and Multiple Ankyrin Repeat Domains 3</th>
</tr>
<tr>
<td class="label">Symbol</td>
<td>SHANK1</td>
</tr>
<tr>
<td class="label">Full Name</td>
<td>SH3 and Multiple Ankyrin Repeat Domains 3</td>
</tr>
<tr>
<td class="label">Chromosomal Location</td>
<td>19q13.33</td>
</tr>
<tr>
<td class="label">NCBI Gene ID</td>
<td>50856</td>
</tr>
<tr>
<td class="label">OMIM ID</td>
<td>603384</td>
</tr>
<tr>
<td class="label">Ensembl ID</td>
<td>ENSG00000161681</td>
</tr>
<tr>
<td class="label">UniProt ID</td>
<td>Q9Y3I0</td>
</tr>
<tr>
<td class="label">Strategy</td>
<td>Drug/Approach</td>
</tr>
<tr>
<td class="label">Gene therapy</td>
<td>AAV-Shank1/2/3</td>
</tr>
<tr>
<td class="label">Small molecule</td>
<td>Spine plasticity enhancers</td>
</tr>
<tr>
<td class="label">Peptide</td>
<td>PSD scaffolds</td>
</tr>
<tr>
<td class="label">KG Connections</td>
<td><a href="/atlas" style="color:#4fc3f7">1 edges</a></td>
</tr>
</table>
Shank1 — Sh3 And Multiple Ankyrin Repeat Domains 3 is an important component in the neurobiology of neurodegenerative diseases. This page provides detailed information about its structure, function, and role in disease processes.
Overview
SHANK1 encodes a scaffold protein that organizes the postsynaptic density of excitatory synapses. Shank proteins (SHANK1-3) are crucial for synaptic structure, function, and plasticity, linking glutamate receptors to the actin cytoskeleton. [@ref1999]
Gene Information
Normal Function
Shank1 is a postsynaptic scaffold protein that:
- Organizes PSD: Forms the core of the postsynaptic density
- Links receptors to cytoskeleton: Connects AMPA/NMDA receptors to actin
- Regulates spine morphology: Controls dendritic spine shape and size
- Synaptic plasticity: Essential for [LTP](/mechanisms/long-term-potentiation) and LTD
- Signaling pathways: Scaffold for various synaptic signaling molecules
Disease Associations
Alzheimer's Disease
- Role: Synaptic loss and dendritic spine dysfunction
- Mechanism: [Aβ](/proteins/amyloid-beta) oligomers disrupt Shank1 interactions
- Research: Reduced Shank1 in AD brain correlates with cognitive decline
Parkinson's Disease
- Role: Dysfunction in dopaminergic synapse structure
- Mechanism: May affect excitatory/inhibitory balance
Autism Spectrum Disorder
- Role: Synaptic dysfunction
- Mechanism: SHANK1 mutations associated with ASD
- Inheritance: Autosomal dominant and de novo
Schizophrenia
- Role: Synaptic pathology
- Mechanism: Altered Shank1 expression in schizophrenia brain
Expression Pattern
Brain-specific expression:
- [Cortex](/brain-regions/cortex) (layers II-III, V)
- [Hippocampus](/brain-regions/hippocampus) (CA1, CA3)
- Cerebellum (Purkinje cells)
- [Striatum](/brain-regions/striatum)
Therapeutic Targeting
Expression Pattern
The SHANK1 gene exhibits brain-specific expression with highest levels in the cerebral cortex, hippocampus, and olfactory bulb. Within [neurons](/entities/neurons), SHANK1 mRNA is localized to dendrites, where local translation occurs in response to synaptic activity. The protein is enriched in the postsynaptic density of excitatory synapses on dendritic spine heads. Expression is developmentally regulated, with low levels during embryogenesis and a sharp increase during the first three postnatal weeks in mice, coinciding with synaptogenesis and spine maturation. In human brain, SHANK1 is expressed in pyramidal neurons throughout the cortex, with particularly high levels in layer 5 projection neurons that undergo early degeneration in Alzheimer's disease.
Molecular Mechanisms
SHANK1 encodes a 2160-amino acid scaffold protein that serves as a mega-scaffold at excitatory synapses:
- ANK repeat domains (7 repeats): Bind to α-fodrin and other cytoskeletal proteins
- PDZ domain: Binds to PSD-95 and other MAGUK proteins
- Proline-rich region: Interacts with cortactin (actin dynamics) and Homer (metabotropic glutamate signaling)
- SAM domain (C-terminus): Mediates higher-order oligomerization
SHANK1 forms a bridge between synaptic receptors and the actin cytoskeleton. It binds to PSD-95 via its PDZ domain, to actin via cortactin in the proline-rich region, and to Homer proteins that link to metabotropic glutamate receptors (mGluR1/5). This creates a stable postsynaptic scaffold that maintains spine structure and synaptic signaling. Activity-dependent modifications include phosphorylation by CaMKII, which enhances SHANK1 stability at the synapse.
Research Directions
Current SHANK1 research focuses on:
- How [Aβ](/proteins/amyloid-beta) disrupts SHANK1-actin coupling in AD models
- SHANK1 haploinsufficiency in autism spectrum disorders
- AAV-mediated SHANK1 gene therapy for synaptic restoration
- Small molecules that enhance SHANK1 spine recruitment
- Post-translational modifications in disease states (phosphorylation, sumoylation)
- iPSC models from ASD patients with SHANK1 mutations
Background
The study of Shank1 — Sh3 And Multiple Ankyrin Repeat Domains 3 has evolved significantly over the past decades. Research in this area has revealed important insights into the underlying mechanisms of neurodegeneration and continues to drive therapeutic development.
Historical context and key discoveries in this field have shaped our current understanding and will continue to guide future research directions.
Key Publications
- PSD-95- Synaptic Dysfunction
- [Alzheimer's Disease](/diseases/alzheimers-disease)
- [Parkinson's Disease](/diseases/parkinsons-disease)
- Autism Spectrum Disorders
- SHANK3
External Links
- [NCBI Gene: SHAN- [UniProt: SHANK1](https://www.uniprot.org/uniprot/Q9Y3I0)
- [HGNC: SHANK1](https://www.genenames.org/data/gene-symbol-report/#!/hgnc_id/HGNC:29436)
References
▸Metadataorigin_type: v1_polymorphic_backfill
| slug | genes-shank1 |
| kg_node_id | SHANK1 |
| entity_type | gene |
| origin_type | v1_polymorphic_backfill |
| source_table | wiki_pages |
| wiki_page_id | wp-b5451b556488 |
| __merged_from | {'merged_at': '2026-05-13', 'unprefixed_id': 'genes-shank1'} |
| _schema_version | 1 |
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