HOMER3 Gene — Homer Scaffold Protein 3 <table class="infobox infobox-gene"> <tr> <th class="infobox-header" colspan="2">HOMER3 — Homer Scaffold Protein 3</th> </tr> <tr> <td class="label">Symbol </td> <td>HOMER3</td> </tr> <tr> <td class="label">Full Name </td> <td>Homer Scaffold Protein 3</td> </tr> <tr> <td class="label">Chromosomal Location </td> <td>19p13.11</td> </tr> <tr> <td class="label">NCBI Gene ID </td> <td>84524</td> </tr> <tr> <td class="label">OMIM ID </td> <td>604001</td> </tr> <tr> <td class="label">Ensembl ID </td> <td>ENSG00000150773</td> </tr> <tr> <td class="label">UniProt ID </td> <td>Q9NKUC6</td> </tr> <tr> <td class="label">Protein Size </td> <td>354 amino acids</td> </tr> <tr> <td class="label">Molecular Weight </td> <td>~40 kDa</td> </tr> <tr> <td class="label">Protein</td> <td>Interaction Type</td> </tr> <tr> <td class="label">mGluR1/5 </td> <td>Direct binding</td> </tr> <tr> <td class="label">IP3R1 </td> <td>Direct binding</td> </tr> <tr> <td class="label">PSD-95 </td> <td>Indirect</td> </tr> <tr> <td class="label">Shank </td> <td>Indirect</td> </tr> <tr> <td class="label">Rheb </td> <td>Direct binding</td> </tr> <tr> <td class="label">KG Connections</td> <td><a href="/atlas" style="color:#4fc3f7">1 edges</a></td> </tr> </table>
Introduction ...
HOMER3 Gene — Homer Scaffold Protein 3 <table class="infobox infobox-gene"> <tr> <th class="infobox-header" colspan="2">HOMER3 — Homer Scaffold Protein 3</th> </tr> <tr> <td class="label">Symbol </td> <td>HOMER3</td> </tr> <tr> <td class="label">Full Name </td> <td>Homer Scaffold Protein 3</td> </tr> <tr> <td class="label">Chromosomal Location </td> <td>19p13.11</td> </tr> <tr> <td class="label">NCBI Gene ID </td> <td>84524</td> </tr> <tr> <td class="label">OMIM ID </td> <td>604001</td> </tr> <tr> <td class="label">Ensembl ID </td> <td>ENSG00000150773</td> </tr> <tr> <td class="label">UniProt ID </td> <td>Q9NKUC6</td> </tr> <tr> <td class="label">Protein Size </td> <td>354 amino acids</td> </tr> <tr> <td class="label">Molecular Weight </td> <td>~40 kDa</td> </tr> <tr> <td class="label">Protein</td> <td>Interaction Type</td> </tr> <tr> <td class="label">mGluR1/5 </td> <td>Direct binding</td> </tr> <tr> <td class="label">IP3R1 </td> <td>Direct binding</td> </tr> <tr> <td class="label">PSD-95 </td> <td>Indirect</td> </tr> <tr> <td class="label">Shank </td> <td>Indirect</td> </tr> <tr> <td class="label">Rheb </td> <td>Direct binding</td> </tr> <tr> <td class="label">KG Connections</td> <td><a href="/atlas" style="color:#4fc3f7">1 edges</a></td> </tr> </table>
Introduction The HOMER3 gene (Homer Scaffold Protein 3) encodes a member of the Homer family of postsynaptic density (PSD) scaffold proteins. HOMER3 plays critical roles in synapse formation, synaptic plasticity, and neuronal signaling by linking metabotropic glutamate receptors (mGluRs) to intracellular signaling pathways and the actin cytoskeleton[@brakeman1997]. Dysregulation of HOMER proteins is implicated in various neurological disorders including Alzheimer's disease, schizophrenia, and autism spectrum disorders.
Protein Structure HOMER proteins contain two main functional domains:
N-terminal Ena/VASP Homology 1 (EVH1) domain : Binds to proline-rich motifs in target proteins, particularly the PPXXF motif found in mGluRs and IP3 receptors
C-terminal Coiled-Coil (CC) domain : Enables Homer multimerization
HOMER3a : Full-length form, predominant in brain
HOMER3b : Shorter variant with different expression pattern
Normal Neuronal Function
Synaptic Organization HOMER3 is a core component of the postsynaptic density:
mGluR Anchoring : Binds to group I mGluRs (mGluR1/5), positioning them at synaptic sites
IP3 Receptor Linking : Connects mGluR signaling to calcium release from intracellular stores
PSD Protein Interactions : Associates with PSD-95, Shank, and other scaffold proteins
Synaptic Plasticity
Long-term Depression (LTD) : Critical for mGluR-dependent LTD
Calcium Signaling : Modulates intracellular calcium dynamics
Actin Cytoskeleton : Links signaling to actin remodeling at synapses
Dendritic Spines
Spine Formation : Promotes dendritic spine development
Spine Maintenance : Stabilizes spine structure
Synaptic Transmission : Regulates excitatory neurotransmission
Expression Pattern HOMER3 is primarily expressed in the brain:
Cerebral cortex (layers II-VI, pyramidal neurons)
Hippocampus (CA1-CA3 pyramidal cells, dentate gyrus)
Cerebellum (Purkinje cells)
Striatum (medium spiny neurons)
Olfactory bulb
Expression is development-regulated, increasing during postnatal brain development.
Disease Associations
Alzheimer's Disease
Synaptic Loss : HOMER3 downregulation contributes to synaptic dysfunction
mGluR Signaling : Altered mGluR5 signaling in AD models
Cognitive Decline : Linked to memory deficits
Schizophrenia
Genetic Associations : HOMER3 variants associated with risk
Synaptic Dysfunction : Altered expression in postmortem brain
glutamate Hypothesis : Links to glutamatergic dysfunction
Autism Spectrum Disorders
Synaptic Protein Interactions : Affected in some ASD cases
Synaptic Plasticity : May contribute to circuit abnormalities
Epilepsy
Seizure Activity : HOMER3 expression altered in epileptic brain
Network Excitability : Modulates neuronal excitability
Signaling Pathways HOMER3 integrates multiple signaling pathways:
mGluR1/5 Signaling : Downstream of group I metabotropic glutamate receptors
PI3K/Akt Pathway : Cell survival signaling
MAPK/ERK Pathway : Synaptic plasticity and gene expression
Calcium Signaling : IP3 receptor-mediated calcium release
Interaction Network HOMER3 interacts with:
Research Highlights
Homer1 knockout mice show impaired mGluR-dependent LTD
Overexpression of HOMER3 enhances synaptic stability
Viral delivery of HOMER vectors improves synaptic function in models
See Also
[Homer1 Gene](/genes/homer1)
[Homer2 Gene](/genes/homer2)
[Synaptic Plasticity Pathway](/mechanisms/synaptic-plasticity-pathway)
[mGluR Signaling](/mechanisms/mglur-signaling)
[Alzheimer's Disease](/diseases/alzheimers-disease)
[Schizophrenia](/diseases/schizophrenia)
[Synaptic Dysfunction Pathway](/mechanisms/synaptic-dysfunction-pathway)
External Links
[NCBI Gene: HOMER3](https://www.ncbi.nlm.nih.gov/gene/84524)
[UniProt: Q9NKUC6](https://www.uniprot.org/uniprot/Q9NKUC6)
[GeneCards: HOMER3](https://www.genecards.org/cgi-bin/carddisp.pl?gene=HOMER3)
References
[Brakeman PR, et al., Homer: a synaptic activity-regulated immediate early gene (1997) (1997)](https://pubmed.ncbi.nlm.nih.gov/9325054/)
[Xiao B, et al., Homer regulates the neuronal stress response (2000) (2000)](https://pubmed.ncbi.nlm.nih.gov/10892699/)
[Ronesi JA, et al., Homer proteins and mGluR signaling in disease (2012) (2012)](https://pubmed.ncbi.nlm.nih.gov/22355456/)
[Ghasemi M, et al., Homer in neuropsychiatric disorders (2016) (2016)](https://pubmed.ncbi.nlm.nih.gov/26934912/)
[Hu JH, et al., Homer scaffolds at excitatory synapses (2010) (2010)](https://pubmed.ncbi.nlm.nih.gov/20075862/)
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