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SCFA-Mediated Neuroinflammation in Alzheimer's Disease
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experiment
Created: 2026-04-02T10:01:41
By: crosslink-v2
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ID: experiment-exp-wiki-experiments-scfa-neu
🧫 Experiment Protocol
Clinicalproposed
SUMMARY
# SCFA-Mediated Neuroinflammation in Alzheimer's Disease
## Background and Rationale
Short-chain fatty acids (SCFAs), primarily acetate, propionate, and butyrate, are microbial metabolites that serve as critical mediators of the gut-brain axis and have emerged as potential therapeutic targets in Alzheimer's disease (AD). These metabolites, produced through bacterial fermentation of dietary fiber, possess anti-inflammatory properties and can cross the blood-brain barrier to modulate neuroinflamma
METHODOLOGY NOTES
Phase 1 (Months 1-6): Recruit 120 participants (60 mild-to-moderate AD patients, 60 age-matched controls) through memory clinics. Inclusion criteria: AD patients with MMSE 15-24, controls with MMSE >27. Exclude participants with inflammatory conditions, recent antibiotic use, or significant comorbidities. Phase 2 (Months 3-18): Conduct comprehensive baseline assessments including neuropsychological testing (ADAS-Cog, CDR, MMSE), lumbar puncture for CSF collection, and fasting blood draw. Collect stool samples using standardized protocols with immediate freezing at -80°C. Perform brain MRI and [18F]DPA-714 PET imaging for microglial activation assessment. Phase 3 (Months 6-24): Analyze biological samples using gas chromatography-mass spectrometry for SCFA quantification (acetate, propionate, butyrate) in plasma and feces. Measure CSF inflammatory markers (IL-1β, TNF-α, IL-6, GFAP, YKL-40) using ELISA and Luminex multiplex assays. Quantify neuroimaging biomarkers including microglial bin
▸Metadatasource: {'type': 'manual', 'source_name': 'wiki'
| source | {'type': 'manual', 'source_name': 'wiki', 'extracted_by': 'backfill_v1', 'extraction_date': '2026-04-16T01:00:16.900538Z'} |
| summary | # SCFA-Mediated Neuroinflammation in Alzheimer's Disease ## Background and Rationale Short-chain fatty acids (SCFAs), primarily acetate, propionate, and butyrate, are microbial metabolites that serve |
| entities | {'genes': ['SCFA'], 'diseases': ["Alzheimer's Disease"]} |
| model_system | human |
| _schema_version | 1 |
| experiment_type | clinical |
| primary_outcome | Validate SCFA-Mediated Neuroinflammation in Alzheimer's Disease |
| methodology_notes | Phase 1 (Months 1-6): Recruit 120 participants (60 mild-to-moderate AD patients, 60 age-matched controls) through memory clinics. Inclusion criteria: AD patients with MMSE 15-24, controls with MMSE >2 |
| replication_status | single_study |
| extraction_metadata | {'backfill_at': '2026-04-16T01:00:16.900548', 'needs_review': True, 'extraction_notes': 'Backfilled from wiki source (no PMID available)', 'extraction_confidence': 0.4} |
📊 Evidence Profile
Foundational
Evidence Balance
+0%
Certainty
100%
Debates
0
Incoming
549
Outgoing
475
0 supporting
0 contradicting
0 neutral
🌍 Provenance Graph
8 nodes, 30 edges
derives from (16)
experiment-exp-wiki-experiment→hypothesis-h-ee1df336hypothesis-h-ee1df336→analysis-SDA-2026-04-01-gap-20analysis-SDA-2026-04-01-gap-20→hypothesis-h-e7e1f943analysis-SDA-2026-04-01-gap-20→hypothesis-h-ee1df336analysis-SDA-2026-04-01-gap-20→hypothesis-h-6c83282d
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analysis-SDA-2026-04-01-gap-20→hypothesis-h-2e7eb2eaanalysis-SDA-2026-04-01-gap-20→hypothesis-h-f9c6fa3fexperiment-exp-wiki-experiment→hypothesis-h-f9c6fa3fhypothesis-h-f9c6fa3f→analysis-SDA-2026-04-01-gap-20experiment-exp-wiki-experiment→hypothesis-h-e7e1f943hypothesis-h-e7e1f943→analysis-SDA-2026-04-01-gap-20experiment-exp-wiki-experiment→hypothesis-h-6c83282dhypothesis-h-6c83282d→analysis-SDA-2026-04-01-gap-20experiment-exp-wiki-experiment→hypothesis-h-2e7eb2eahypothesis-h-2e7eb2ea→analysis-SDA-2026-04-01-gap-20experiment-exp-wiki-experiment→wiki-experiments-scfa-neuroinf
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