CLDN5

Claudin-5

Score: 0.469 Price: $0.47 Undruggable Druggability Status: active Wiki: CLDN5
๐Ÿง  Neurodegeneration
HYPOTHESES
1
PAPERS
17
KG EDGES
152
DEBATES
0

3D Protein Structure

🧬 CLDN5 โ€” PDB 6OV2 Click to expand

Experimental structure from RCSB PDB | Powered by Mol*

Druggability & Clinical Context

Druggability
Undruggable
Score: 0.20
Clinical Stage
Approved
Target Class
Structural Protein
Safety
0.30
Druggability Analysis
Drug Development0.60
Structural Tractability0.30
Target Class0.50
Safety Profile0.30
Key Metrics
PDB Structures:
0
Known Drugs:
2
Approved:
0
In Clinical Trials:
0
Drug Pipeline (2 compounds)
2 Preclinical
Therapeutic Areas:
Neurodegenerative diseases (Alzheimer's, Parkinson's) Neuroinflammation and CNS disorders Blood-brain barrier dysfunction Stroke and cerebral ischemia Brain tumor drug delivery enhancement Neurotrauma and traumatic brain injury
Druggability Rationale: Despite CLDN5's critical role in blood-brain barrier integrity and neurological disease pathogenesis, it remains a challenging druggability target due to limited established pharmacological intervention mechanisms. While preclinical anti-CLDN5 antibodies and size-selective BBB modulators show potential promise, the lack of clear structure-based drug design strategies and the protein's complex tight junction functional role currently constrains direct therapeutic targeting. Further structural and mechanistic research is needed to develop precise molecular strategies for modulating CLDN5's function in neurodegeneration.
Mechanism: Tight junction protein modulation - no established druggable mechanisms
Drug Pipeline (2 compounds)
2 Preclinical
Known Drugs:
Anti-CLDN5 antibodies (preclinical) โ€” Transient BBB opening for drug delivery
Size-selective BBB modulators (preclinical) โ€” Claudin-5 targeted siRNA for BBB modulation
Structural Data:
PDB โ€”AlphaFold โœ“Cryo-EM โ€”
UniProt: O00501
Binding Pocket Analysis:

CLDN5 lacks identified druggable small-molecule binding pockets; instead, therapeutic engagement occurs through antibody epitopes on extracellular loops or indirect modulation via partner proteins (occludin, ZO-1). The target is best approached through biologics or allosteric modulators affecting claudin-claudin interactions rather than orthosteric small-molecule binding at a defined active site.

🧬 3D Protein Structure

🧬 CLDN5 — PDB 6OV2 Click to expand interactive 3D viewer

Experimental structure from RCSB PDB | Powered by Mol* | Rotate: click+drag | Zoom: scroll

Selectivity & Safety Considerations

Selectivity is a critical challenge given CLDN5's widespread expression across multiple claudin family members (CLDN1-24) and its tissue distribution beyond the BBB in other tight junction barriers. Off-target disruption of gastrointestinal, renal, or skin barrier function poses significant safety liabilities; any therapeutic approach requires BBB-specific targeting strategies to minimize systemic claudin modulation.

3D Protein Structure (AlphaFold)

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AlphaFold predicted structure available for O00501

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Clinical Trials (5)

Relevant trials from ClinicalTrials.gov

Active
2
Completed
1
Total Enrollment
1,372
By Phase
NA: 3 ยท PHASE4: 1 ยท Unknown: 1
Deciphering the Effect of Moderate Wine Consumption on Healthy Aging Through Postprandial Extracellular Vesicles. Recruiting
NA NCT07361887 n=8
Atherosclerosis Cardiovascular Disease, Obesity, Metabolic Syndrome
Interventions: White Wine, Red Wine, Water
Sponsor: University of Seville
Methylene Blue and Postoperative Neurocognitive Disorders Completed
NA NCT04529265 n=314
Postoperative Delirium
Interventions: Methylene Blue, Placebo
Sponsor: Fudan University
Precision Medicine in the Treatment of Epilepsy Recruiting
Unknown NCT05450822 n=550
Epilepsy
Interventions: Levetiracetam, Levetiracetam Tablets, Lamotrigine tablet
Sponsor: Gitte Moos Knudsen
CERebrolysine Effect on Blood-brain Barrier in acUte Ischemic Stroke Unknown
PHASE4 NCT06078215 n=350
Acute Ischemic Stroke
Interventions: Cerebrolysin
Sponsor: Poznan University of Medical Sciences
The Cognitive-Behavioral Dysfunctions and the Potential of Neuroplasticity in Brain Tumors Patients During Radiotherapy Unknown
NA NCT05192447 n=150
Brain Tumors, Radiotherapy
Interventions: Exercise treatment
Sponsor: The Greater Poland Cancer Centre

Linked Hypotheses (1)

Vascular-Glial Interface Restoration0.544

Linked Experiments (0)

No linked experiments

Scoring Dimensions

Portfolio 0.50 (25%) Druggability 0.20 (20%) Evidence 0.55 (20%) Safety 0.30 (15%) Competitive 0.40 (10%) Connectivity 0.90 (10%) 0.469 composite

Knowledge Graph (20)

activates (7)

CLDN5 โ†’ CAV1
CLDN5 โ†’ HIF1A
CLDN5 โ†’ OCLN
CLDN5 โ†’ BECN1
CLDN5 โ†’ DDIT3
...and 2 more

associated with (1)

CLDN5 โ†’ neurodegeneration

encodes (2)

CLDN5 โ†’ CLAUDIN5
CLDN5 โ†’ Claudin-5

inhibits (6)

CLDN5 โ†’ OCLN
CLDN5 โ†’ IL23A
CLDN5 โ†’ IL6
CLDN5 โ†’ CXCL1
CLDN5 โ†’ CXCL2
...and 1 more

interacts with (1)

CLDN5 โ†’ OCLN

therapeutic target (3)

CLDN5 โ†’ HSPA5
CLDN5 โ†’ PPP1R15A
CLDN5 โ†’ XBP1

Debate History (0)

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