Entity Detail — Knowledge Graph Node
This page aggregates everything SciDEX knows about XBP1: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.
XBP1 is a gene implicated in neurodegeneration research. Key relationships include: activates, regulates, therapeutic target. Associated with ALS, Aging, Als. Connected to 162 entities in the SciDEX knowledge graph.
| Gene Symbol | XBP1 |
| Full Name | X-Box Binding Protein 1 |
| Aliases | Page for XBP1 |
| Chromosome | 22q12.1 |
| Protein Type | Transcription Factor |
| Function | ER Expansion and Biogenesis: Increases ER membrane synthesis and volume |
| Primary Expression | Brain, Liver, Pancreas, Immune cells |
| Molecular Weight | 29 kDa |
| Amino Acids | 261 aa |
| Pathways | Autophagy, Er Stress, Glycolysis, Mitophagy, Unfolded Protein Response |
| UniProt ID | P17861 |
| NCBI Gene ID | 7499 |
| Ensembl ID | ENSG00000143419 |
| GeneCards | XBP1 |
| Human Protein Atlas | XBP1 |
| Associated Diseases | Tumor |
| Interactions | DDIT3, HSPA5, ATF3, TOMM20, PTEN, USP30 |
| KG Connections | 261 knowledge graph edges |
| Databases | GeneCardsHPASTRING |
Knowledge base pages for this entity
flowchart TD
XBP1["XBP1<br/>ER Stress<br/>Response Factor"]
ER_Stress["ER Stress<br/>Pathway"]
HSPA5["HSPA5<br/>(BiP/GRP78)<br/>ER Chaperone"]
DDIT3["DDIT3<br/>(CHOP)<br/>Pro-apoptotic"]
ATF3["ATF3<br/>Stress Response<br/>Transcription Factor"]
BBB["Blood-Brain<br/>Barrier<br/>Integrity"]
CLDN5["CLDN5<br/>Claudin-5<br/>Tight Junction"]
OCLN["OCLN<br/>Occludin<br/>Tight Junction"]
Neuroinflammation["Neuroinflammation<br/>Process"]
CXCL1["CXCL1<br/>Chemokine<br/>Signaling"]
IL23A["IL23A<br/>Interleukin-23<br/>Inflammatory"]
ALS["Amyotrophic<br/>Lateral Sclerosis<br/>(ALS)"]
MS["Multiple<br/>Sclerosis<br/>(MS)"]
Dementia["Dementia<br/>Cognitive Decline"]
Mitochondria["TOMM20<br/>Mitochondrial<br/>Import"]
XBP1 --|"activates"|--> ER_Stress
XBP1 --|"activates"|--> HSPA5
XBP1 --|"activates"|--> DDIT3
XBP1 --|"activates"|--> ATF3
XBP1 --|"activates"|--> Mitochondria
XBP1 --|"therapeutic_target"|--> BBB
XBP1 --|"therapeutic_target"|--> CLDN5
XBP1 --|"therapeutic_target"|--> OCLN
XBP1 --|"therapeutic_target"|--> CXCL1
XBP1 --|"therapeutic_target"|--> IL23A
CXCL1 --|"promotes"|--> Neuroinflammation
IL23A --|"promotes"|--> Neuroinflammation
ER_Stress --|"contributes"|--> ALS
ER_Stress --|"contributes"|--> MS
ER_Stress --|"contributes"|--> Dementia
DDIT3 --|"promotes"|--> ALS
Neuroinflammation --|"contributes"|--> MS
BBB --|"dysfunction"|--> Dementia
style XBP1 fill:#006494
style HSPA5 fill:#1b5e20
style BBB fill:#1b5e20
style CLDN5 fill:#1b5e20
style OCLN fill:#1b5e20
style ER_Stress fill:#ef5350
style DDIT3 fill:#ef5350
style Neuroinflammation fill:#ef5350
style ATF3 fill:#4a1a6b
style CXCL1 fill:#4a1a6b
style IL23A fill:#4a1a6b
style Mitochondria fill:#4a1a6b
style ALS fill:#5d4400
style MS fill:#5d4400
style Dementia fill:#5d4400| Target | Relation | Type | Str |
|---|---|---|---|
| SESTRIN2 | upregulates | gene | 0.92 |
| Als | activates | disease | 0.75 |
| STING | activates | gene | 0.70 |
| Er Stress | activates | pathway | 0.70 |
| Mitophagy | activates | pathway | 0.70 |
| MITOPHAGY | activates | gene | 0.70 |
| oxidative stress response | participates_in | pathway | 0.70 |
| Ms | therapeutic_target | disease | 0.65 |
| Als | therapeutic_target | disease | 0.65 |
| Aging | activates | disease | 0.65 |
| Cardiovascular | activates | disease | 0.65 |
| Obesity | activates | disease | 0.65 |
| Obesity | interacts_with | disease | 0.65 |
| Glioblastoma | regulates | disease | 0.65 |
| Cancer | regulates | disease | 0.65 |
| Tumor | associated_with | disease | 0.65 |
| Inflammation | activates | disease | 0.65 |
| Hepatitis | activates | disease | 0.65 |
| Dementia | activates | disease | 0.65 |
| Amyotrophic Lateral Sclerosis | activates | disease | 0.65 |
| Ms | activates | disease | 0.65 |
| Fibrosis | activates | disease | 0.65 |
| Als | expressed_in | disease | 0.65 |
| Ms | expressed_in | disease | 0.65 |
| Glioblastoma | expressed_in | disease | 0.65 |
| Ms | interacts_with | disease | 0.65 |
| Carcinoma | interacts_with | disease | 0.65 |
| Cancer | activates | disease | 0.65 |
| Tumor | regulates | disease | 0.65 |
| ALS | activates | disease | 0.65 |
| Aging | interacts_with | disease | 0.65 |
| Tumor | activates | disease | 0.65 |
| Carcinoma | activates | disease | 0.65 |
| Ms | regulates | disease | 0.65 |
| Parkinson | regulates | disease | 0.65 |
| CXCL1 | therapeutic_target | gene | 0.60 |
| DDIT3 | activates | gene | 0.60 |
| CLDN5 | therapeutic_target | gene | 0.60 |
| HSPA5 | activates | gene | 0.60 |
| OCLN | therapeutic_target | gene | 0.60 |
| IL23A | therapeutic_target | gene | 0.60 |
| ATF3 | activates | gene | 0.60 |
| TOMM20 | activates | gene | 0.60 |
| PTEN | activates | gene | 0.60 |
| USP30 | activates | gene | 0.60 |
| FOXO3 | activates | gene | 0.60 |
| HSPD1 | activates | gene | 0.60 |
| COX4I1 | activates | gene | 0.60 |
| GRIA2 | activates | gene | 0.60 |
| PRKN | activates | gene | 0.60 |
| Source | Relation | Type | Str |
|---|---|---|---|
| DTG | upregulates | drug | 0.85 |
| NLRP3 | activates | gene | 0.70 |
| APOE4 | inhibits | protein | 0.70 |
| CXCL2 | therapeutic_target | gene | 0.60 |
| IL6 | therapeutic_target | gene | 0.60 |
| ATF4 | activates | gene | 0.60 |
| PPP1R15A | activates | gene | 0.60 |
| IL12B | therapeutic_target | gene | 0.60 |
| MYO7A | activates | gene | 0.60 |
| MAP1LC3B | activates | gene | 0.60 |
| OPTN | activates | gene | 0.60 |
| PARKIN | activates | gene | 0.60 |
| PINK1 | activates | gene | 0.60 |
| DDIT3 | activates | gene | 0.60 |
| CLDN5 | therapeutic_target | gene | 0.60 |
| IL23A | therapeutic_target | gene | 0.60 |
| OCLN | therapeutic_target | gene | 0.60 |
| CXCL1 | therapeutic_target | gene | 0.60 |
| PTEN | activates | gene | 0.60 |
| USP30 | activates | gene | 0.60 |
| FOXO3 | activates | gene | 0.60 |
| ATF3 | activates | gene | 0.60 |
| TOMM20 | activates | gene | 0.60 |
| GRIA2 | activates | gene | 0.60 |
| PRKN | activates | gene | 0.60 |
| MBP | activates | gene | 0.60 |
| SOX9 | activates | gene | 0.60 |
| ERN1 | activates | gene | 0.60 |
| TREM2 | activates | gene | 0.60 |
| ATF6 | activates | gene | 0.60 |
| GADD34 | activates | gene | 0.60 |
| RICTOR | activates | gene | 0.60 |
| C9ORF72 | activates | gene | 0.60 |
| VCP | activates | gene | 0.60 |
| AKT | activates | gene | 0.60 |
| BNIP3 | regulates | gene | 0.60 |
| PBX3 | expressed_in | gene | 0.60 |
| PECAM1 | protects_against | gene | 0.60 |
| FOS | protects_against | gene | 0.60 |
| FGF1 | protects_against | gene | 0.60 |
| FGF5 | protects_against | gene | 0.60 |
| IL1A | interacts_with | gene | 0.60 |
| CD44 | inhibits | gene | 0.60 |
| IL12B | activates | gene | 0.60 |
| HSPA5 | activates | gene | 0.60 |
| CXCL2 | activates | gene | 0.60 |
| HSPD1 | activates | gene | 0.60 |
| TFEB | regulates | gene | 0.60 |
| PINK1 | expressed_in | gene | 0.60 |
| GSDMD | activates | gene | 0.60 |
Hypotheses where this entity is a therapeutic target
| Hypothesis | Score | Disease | Analysis |
|---|---|---|---|
| No targeting hypotheses | |||
Scientific analyses that reference this entity
No analyses mention this entity
Scientific publications cited in analyses involving this entity
| Title & PMID | Authors | Journal | Year | Citations |
|---|---|---|---|---|
| No papers found | ||||