PER3 Protein
Introduction Per3 Protein is an important component in the neurobiology of neurodegenerative diseases. This page provides detailed information about its structure, function, and role in disease processes.
<div class="infobox infox-protein"> [@neurotrophic] <table> [@cntf] <tr><th colspan="2" style="background:#f0f0f0;">PER3 — Period Circadian Regulator 3 Protein</th></tr> [@trophic] <tr><td><strong>Protein Name</strong></td><td>Period Circadian Regulator 3</td></tr> [@neurodegeneration] <tr><td><strong>Gene</strong></td><td>[PER3](/proteins/per3-protein)</td></tr> <tr><td><strong>UniProt ID</strong></td><td>Q8WY51</td></tr> <tr><td><strong>PDB Structure</strong></td><td>6CKP, 6M8O</td></tr> <tr><td><strong>Molecular Weight</strong></td><td>121 kDa</td></tr> <tr><td><strong>Subcellular Localization</strong></td><td>Nucleus, Cytoplasm</td></tr> <tr><td><strong>Protein Family</strong></td><td>PER family</td></tr> <tr> <td class="label">Associated Diseases</td> <td><a href="/wiki/cancer" style="color:#ef9a9a">Cancer</a>, <a href="/wiki/carcinoma" style="color:#ef9a9a">Carcinoma</a>, <a href="/wiki/tumor" style="color:#ef9a9a">Tumor</a></td> </tr> <tr> <td class="label">KG Connections</td> <td><a href="/atlas" style="color:#4fc3f7">22 edges</a></td> </tr> </table> </div>
Overview ...
PER3 Protein
Introduction Per3 Protein is an important component in the neurobiology of neurodegenerative diseases. This page provides detailed information about its structure, function, and role in disease processes.
<div class="infobox infox-protein"> [@neurotrophic] <table> [@cntf] <tr><th colspan="2" style="background:#f0f0f0;">PER3 — Period Circadian Regulator 3 Protein</th></tr> [@trophic] <tr><td><strong>Protein Name</strong></td><td>Period Circadian Regulator 3</td></tr> [@neurodegeneration] <tr><td><strong>Gene</strong></td><td>[PER3](/proteins/per3-protein)</td></tr> <tr><td><strong>UniProt ID</strong></td><td>Q8WY51</td></tr> <tr><td><strong>PDB Structure</strong></td><td>6CKP, 6M8O</td></tr> <tr><td><strong>Molecular Weight</strong></td><td>121 kDa</td></tr> <tr><td><strong>Subcellular Localization</strong></td><td>Nucleus, Cytoplasm</td></tr> <tr><td><strong>Protein Family</strong></td><td>PER family</td></tr> <tr> <td class="label">Associated Diseases</td> <td><a href="/wiki/cancer" style="color:#ef9a9a">Cancer</a>, <a href="/wiki/carcinoma" style="color:#ef9a9a">Carcinoma</a>, <a href="/wiki/tumor" style="color:#ef9a9a">Tumor</a></td> </tr> <tr> <td class="label">KG Connections</td> <td><a href="/atlas" style="color:#4fc3f7">22 edges</a></td> </tr> </table> </div>
Overview PER3 (Period Circadian Regulator 3) is a core component of the circadian clock, forming part of the negative feedback loop with CLOCK and BMAL1. PER3 regulates circadian rhythms in response to light and is involved in sleep-wake cycle regulation. It interacts with other clock proteins to modulate gene expression.
In neurodegenerative diseases, circadian disruption is a common feature. PER3 polymorphisms are associated with sleep disorders and have been studied in relation to AD and PD. The gene is located on chromosome 1p36.23.
Key Points:
Gene: PER3 (chromosome 1p36.23)
Protein Class: Circadian clock protein
Primary Localization: Nucleus
Disease Associations: Sleep disorders, Alzheimer's disease, Parkinson's disease
Therapeutic Relevance: Target for circadian modulation in neurodegeneration
Structure The PER3 protein is a large (~121 kDa) circadian clock protein consisting of multiple functional domains:
Domain Architecture
PAS-A Domain : Protein-protein interactions
PAS-B Domain : Dimerization with PER proteins
PAS-C Domain : CRY binding
FLD (Frontloading Domain) : Transcriptional regulation
Nuclear Localization Signals (NLS) : Nuclear import
Structural Studies
Crystal structures of PER domains have been solved
The PAS domains form characteristic antiparallel dimer structures
CRY-binding interface mapped through structural studies
Normal Function
Circadian Clock Role PER3 is a core component of the negative feedback loop in the mammalian circadian clock:
Transcriptional Activation : CLOCK/BMAL1 activates PER3 transcription
Cytoplasmic Accumulation : PER3 protein accumulates during the day
Complex Formation : PER3 forms heterodimers with PER1/PER2 and CRY1/CRY2
Nuclear Import : PER/CRY complexes translocate to the nucleus
Transcriptional Repression : Inhibits CLOCK/BMAL1 activity
Degradation : PER3 is targeted for proteasomal degradation
Physiological Functions
Sleep-wake regulation : PER3 VNTR influences sleep propensity
Cognitive performance : PER3 affects cognitive function during circadian misalignment
Metabolic rhythms : PER3 regulates peripheral metabolic gene expression
Role in Disease
Sleep Disorders
Advanced Sleep Phase Disorder : PER3 polymorphisms associated
Delayed Sleep Phase Disorder : PER3 VNTR influences chronotype
Shift Work Disorder : PER3 affects adaptation to shift work
Neurodegeneration
Alzheimer's Disease
PER3 expression is reduced in AD brain
Circadian PER3 rhythm disrupted in AD
May influence amyloid pathology
Parkinson's Disease
PER3 dysregulation in PD peripheral tissues
Contributes to REM sleep behavior disorder
Circadian dysfunction in PD involves PER3
Psychiatric Disorders
Bipolar disorder : PER3 variants associated with rapid cycling
Major depression : Circadian disruption involves PER3
Therapeutic Targeting
Chronobiotics
ROR agonists/antagonists : Modulate PER3 expression
REV-ERB agonists : Affect PER3 transcription
[HDAC](/entities/hdac-enzymes) inhibitors : May normalize PER3 rhythms
Sleep Disorders
Light therapy : Can entrain PER3 rhythms
Melatonin : Modulates PER3 function
Sleep hygiene : Supports circadian PER3 function
Key Publications
Archer SN, et al. (2003). "A length polymorphism in the circadian clock gene PER3." Sleep . PMID: 14551378 (https://pubmed.ncbi.nlm.nih.gov/14551378/)
Viola AU, et al. (2007). "PER3 polymorphism predicts sleep structure." Curr Biol . PMID: 17240337 (https://pubmed.ncbi.nlm.nih.gov/17240337/)
Zhang L, et al. (2016). "PER3 polymorphism influences sleep in the elderly." Neurobiol Aging . PMID: 26675767 (https://pubmed.ncbi.nlm.nih.gov/26675767/)
Wang X, et al. (2022). "PER3 promotes AD pathogenesis." Mol Psychiatry . PMID: 35654979 (https://pubmed.ncbi.nlm.nih.gov/35654979/)
See Also
[PER3 Gene](/proteins/per3-protein)
[PER2 Protein](/proteins/per2-protein)
[CRY1 Protein](/proteins/cry1-protein)
[BMAL1 Protein](/proteins/bmal1-protein)
[Circadian Rhythm Pathway](/mechanisms/circadian-rhythm-disruption)
External Links
[UniProt: PER3 (Q8WY51)](https://www.uniprot.org/uniprot/Q8WY51)
[PDB: PER3 Structures](https://www.rcsb.org/structure/6CKP)
[NCBI Protein: PER3](https://www.ncbi.nlm.nih.gov/protein/Q8WY51)
Background The study of Per3 Protein has evolved significantly over the past decades. Research in this area has revealed important insights into the underlying mechanisms of neurodegeneration and continues to drive therapeutic development.
Historical context and key discoveries in this field have shaped our current understanding and will continue to guide future research directions.
References
[Circa-- [Sleep-Wake Cycle](/sleep-wake-cycle)
Exte- [PER3 Protein - UniProt](https://www.
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