Gene Rankings
Overview
flowchart TD
RANKINGS["RANKINGS"] -->|"interacts with"| Aging["Aging"]
RANKINGS["RANKINGS"] -->|"interacts with"| Als["Als"]
RANKINGS["RANKINGS"] -->|"interacts with"| Cancer["Cancer"]
RANKINGS["RANKINGS"] -->|"associated with"| Lymphoma["Lymphoma"]
RANKINGS["RANKINGS"] -->|"interacts with"| Tumor["Tumor"]
RANKINGS["RANKINGS"] -->|"interacts with"| RAC1["RAC1"]
RANKINGS["RANKINGS"] -->|"associated with"| MAPK1["MAPK1"]
RANKINGS["RANKINGS"] -->|"interacts with"| PI3K["PI3K"]
RANKINGS["RANKINGS"] -->|"associated with"| CBL["CBL"]
RANKINGS["RANKINGS"] -->|"interacts with"| AKT["AKT"]
RANKINGS["RANKINGS"] -->|"interacts with"| RHOA["RHOA"]
RANKINGS["RANKINGS"] -->|"interacts with"| TRAF2["TRAF2"]
RANKINGS["RANKINGS"] -->|"interacts with"| TRAF6["TRAF6"]
RANKINGS["RANKINGS"] -->|"interacts with"| TGFBR1["TGFBR1"]
style RANKINGS fill:#4fc3f7,stroke:#333,color:#000
...
Gene Rankings
Overview
Mermaid diagram (expand to render)
<table class="infobox infobox-gene"> <tr> <th class="infobox-header" colspan="2">Gene Rankings</th> </tr> <tr> <td class="label">Rank</td> <td>Gene</td> </tr> <tr> <td class="label">1</td> <td>APP</td> </tr> <tr> <td class="label">2</td> <td>[APOE](/proteins/apoe)</td> </tr> <tr> <td class="label">3</td> <td>[PSEN1](/entities/psen1)</td> </tr> <tr> <td class="label">4</td> <td>[PSEN2](/entities/psen2)</td> </tr> <tr> <td class="label">5</td> <td>MAPT</td> </tr> <tr> <td class="label">6</td> <td>[TREM2](/proteins/trem2)</td> </tr> <tr> <td class="label">7</td> <td>CLU</td> </tr> <tr> <td class="label">8</td> <td>ABCA7</td> </tr> <tr> <td class="label">9</td> <td>SORL1</td> </tr> <tr> <td class="label">10</td> <td>PLD3</td> </tr> <tr> <td class="label">Rank</td> <td>Gene</td> </tr> <tr> <td class="label">1</td> <td>[SNCA](/genes/snca)</td> </tr> <tr> <td class="label">2</td> <td>[LRRK2](/genes/lrrk2)</td> </tr> <tr> <td class="label">3</td> <td>[GBA](/genes/gba)</td> </tr> <tr> <td class="label">4</td> <td>[PARK2](/genes/park2) (Parkin)</td> </tr> <tr> <td class="label">5</td> <td>[PINK1](/genes/pink1)</td> </tr> <tr> <td class="label">6</td> <td>[DJ-1](/genes/park7)</td> </tr> <tr> <td class="label">7</td> <td>[VPS35](/genes/vps35)</td> </tr> <tr> <td class="label">8</td> <td>DNAJC13</td> </tr> <tr> <td class="label">9</td> <td>[UCHL1](/genes/uchl1)</td> </tr> <tr> <td class="label">10</td> <td>GIGYF2</td> </tr> <tr> <td class="label">Rank</td> <td>Gene</td> </tr> <tr> <td class="label">1</td> <td>[C9orf72](/genes/c9orf72)</td> </tr> <tr> <td class="label">2</td> <td>[SOD1](/genes/sod1)</td> </tr> <tr> <td class="label">3</td> <td>TARDBP (TDP-43)</td> </tr> <tr> <td class="label">4</td> <td>[FUS](/genes/fus)</td> </tr> <tr> <td class="label">5</td> <td>[ANG](/genes/ang)</td> </tr> <tr> <td class="label">6</td> <td>[UBQLN2](/genes/ubqln2)</td> </tr> <tr> <td class="label">7</td> <td>[OPTN](/genes/optn)</td> </tr> <tr> <td class="label">8</td> <td>[TBK1](/genes/tbk1)</td> </tr> <tr> <td class="label">9</td> <td>[VCP](/genes/vcp)</td> </tr> <tr> <td class="label">10</td> <td>HNRNPA1</td> </tr> <tr> <td class="label">Rank</td> <td>Gene</td> </tr> <tr> <td class="label">1</td> <td>APP/Abeta</td> </tr> <tr> <td class="label">2</td> <td>MAPT/Tau</td> </tr> <tr> <td class="label">3</td> <td>SNCA</td> </tr> <tr> <td class="label">4</td> <td>TREM2</td> </tr> <tr> <td class="label">5</td> <td>LRRK2</td> </tr> <tr> <td class="label">6</td> <td>GBA</td> </tr> <tr> <td class="label">7</td> <td>SOD1</td> </tr> <tr> <td class="label">8</td> <td>C9orf72</td> </tr> <tr> <td class="label">Associated Diseases</td> <td><a href="/wiki/aging" style="color:#ef9a9a">Aging</a>, <a href="/wiki/als" style="color:#ef9a9a">Als</a>, <a href="/wiki/cancer" style="color:#ef9a9a">Cancer</a>, <a href="/wiki/lymphoma" style="color:#ef9a9a">Lymphoma</a>, <a href="/wiki/tumor" style="color:#ef9a9a">Tumor</a></td> </tr> <tr> <td class="label">KG Connections</td> <td><a href="/atlas" style="color:#4fc3f7">24 edges</a></td> </tr> </table>
This page ranks genes associated with neurodegenerative diseases by various criteria including disease relevance, research activity, therapeutic target validation, and knowledge base coverage in NeuroWiki. [@app2013]
Rankings by Alzheimer's Disease Relevance
Rankings by Parkinson's Disease Relevance
Rankings by ALS/FTD Relevance
Rankings by Therapeutic Target Validation Genes with strong evidence for therapeutic targeting:
Gene Categories
Alzheimer's Disease Genes
Amyloid pathway : [APP](/genes/app), [APOE](/genes/apoe), [PSEN1](/genes/psen1), [PSEN2](/genes/psen2), [BACE1](/genes/bace1)
Tau pathway : [MAPT](/genes/mapt), [GSK3B](/genes/gsk3b), [CDK5](/genes/cdk5)
Neuroinflammation : [TREM2](/genes/trem2), [CLU](/genes/clu), [ABCA7](/genes/abca7)
Parkinson's Disease Genes
Synucleinopathy : [SNCA](/genes/snca), [GBA](/genes/gba), [LRRK2](/genes/lrrk2)
Mitochondrial quality control : [PARK2](/genes/park2), [PINK1](/genes/pink1), [DJ-1](/genes/dj-1)
Protein clearance : [ATP13A2](/genes/atp13a2), [DNAJC13](/genes/dnajc13)
ALS/FTD Genes
RNA metabolism : [C9orf72](/genes/c9orf72), [TARDBP](/genes/tardbp), [FUS](/genes/fus)
Protein homeostasis : [SOD1](/genes/sod1), [UBQLN2](/genes/ubqln2), [VCP](/genes/vcp)
Autophagy : [OPTN](/genes/optn), [TBK1](/genes/tbk1), [SQSTM1](/genes/sqstm1)
See Also
[Alzheimer's Disease](/diseases/alzheimers-disease)
[Parkinson's Disease](/diseases/parkinsons-disease)
External Links
[NCBI Gene: APP](https://www.ncbi.nlm.nih.gov/gene/?term=APP)
[GeneCards: APP](https://www.genecards.org/cgi-bin/carddisp.pl?gene=APP)
[OMIM: APP](https://omim.org/search?search=APP)
[Ensembl: APP](https://www.ensembl.org/Homo_sapiens/Gene/Summary?g=APP)
[Allen Brain Atlas: APP](https://human.brain-map.org/microarray/search/show?search_term=APP)
Coverage Gaps
Top Entries with Thin Coverage These ranked items have limited content and would benefit from expansion:
[DNAJC13 — 2,858 characters](/genes/ar)
[CLU — 5,963 characters](/genes/ar)
[CDK5 — 6,542 characters](/genes/ar)
[GSK3B — 6,553 characters](/companies/gsk)
[DJ-1 — 6,659 characters](/genes/ar)
[ABCA7 — 7,173 characters](/genes/ar)
[BACE1 — 8,112 characters](/genes/ar)
[PARK2 — 9,135 characters](/genes/ar)
[PSEN1 — 9,211 characters](/genes/ar)
[UBQLN2 — 9,451 characters](/genes/ar)
References
[Unknown, APP and Alzheimer's disease (2013)](https://pubmed.ncbi.nlm.nih.gov/23550210/)
[Unknown, SNCA and Parkinson's disease (2019)](https://pubmed.ncbi.nlm.nih.gov/31479456/)
[Unknown, C9orf72 ALS/FTD genetics (2011)](https://pubmed.ncbi.nlm.nih.gov/22003155/)
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