entity

FE

Entity Detail — Knowledge Graph Node

Understanding Entity Pages

This page aggregates everything SciDEX knows about FE: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.

2Connections
30Hypotheses
8Analyses
2Outgoing
0Incoming
5Experiments
8Debates

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Wiki Pages (20)

Knowledge base pages for this entity

FEEMSA Study: Laryngopharyngeal Function in Neurodegenerative Diseases (NCT04706234)

clinical · 4197 words

Metabolic-Energetic Restoration: GLP-1 + TFEB Activator Combination

idea · 2925 words

Section 244: Advanced Autophagy Induction and TFEB Activation in CBS/PSP

therapeutic · 2683 words

Mitophagy Gate Therapy: PINK1/Parkin + TFEB Priming

idea · 2505 words

TFEB Autophagy Pathway

mechanism · 2374 words

Outgoing (2)

TargetRelationTypeStr
Phospholipid Peroxidationcausesprocess0.95
Substantia Nigraassociated_withbrain_region0.90

Incoming (0)

SourceRelationTypeStr
No incoming edges

Targeting Hypotheses (30)

Hypotheses where this entity is a therapeutic target

HypothesisScoreDiseaseAnalysis
ACSL4-Driven Ferroptotic Priming in Disease-Associated Micro 0.891 alzheimers Cell type vulnerability in Alzheimers Di
hnRNP A2/B1 Staufen2-Mediated Axonal RNA Granule Transport F 0.851 als -
miR-155/Interferon-gamma Feedback Loop as a Reversible Molec 0.843 neurodegeneration How do different microglial subtypes (DA
HSP90-cochaperone complexes preferentially stabilize interme 0.840 protein-biochemistry Do chaperones selectively recognize path
Sequential Iron Chelation (Deferoxamine) and GPX4 Restoratio 0.838 neurodegeneration Can ferroptosis inhibitors prevent BBB d
CREB-Dependent Differential Complement Regulator Positioning 0.833 synaptic-biology What determines the selectivity of compl
Differential Complement Regulator Expression on Synaptic Mem 0.833 synaptic-biology What determines the selectivity of compl
Gamma entrainment repairs cross-regional phase-amplitude cou 0.826 alzheimers Gamma entrainment therapy to restore hip
SIRT1 Activation Couples Mitochondrial Biogenesis to Ferropt 0.824 neurodegeneration Can ferroptosis inhibitors prevent BBB d
GLE1-Mediated mRNA Export Defect Creates Translation-Compete 0.823 als -
SLC7A11 System Activation Restores Cystine Uptake and GSH Sy 0.812 neurodegeneration Can ferroptosis inhibitors prevent BBB d
Thalamocortical Feedforward Inhibition Imposes Rhythm on Gly 0.808 neuroscience GluN2B-Mediated Thalamocortical Control
Targeting the Mechanistic Link Between AQP4 Dysfunction and 0.803 neurodegeneration Can ferroptosis inhibitors prevent BBB d
MATR3 Nuclear Body Disruption Impairs RNA Processing Hubs an 0.801 als -
ACSL4-Ferroptotic Priming in Stressed Oligodendrocytes Drive 0.801 alzheimers Cell type vulnerability in Alzheimers Di
40 Hz Gamma Entrainment Gates ACSL4-Mediated Ferroptotic Pri 0.801 alzheimers Cell type vulnerability in Alzheimers Di
pH-Sensitive Bispecific Antibody Targeting Transferrin Recep 0.800 neurodegeneration Blood-brain barrier antibody transport m
Hypothesis 1: MANF/CDNF Signaling as Primary Neuroprotective 0.798 neurodegeneration Which specific factors in conditioned me
Closed-loop transcranial focused ultrasound targeting CA1 PV 0.797 alzheimers Circuit-level neural dynamics in neurode
Targeting SASP-Complement Amplification Through HIF-1α Downs 0.793 neurodegeneration What molecular mechanism causes VCP muta
LAMP2A Liquid-Liquid Phase Separation Defects in Dopaminergi 0.783 neurodegeneration -
TFEB Nuclear Translocation to Reset Lysosomal-Hypoxia Axis 0.779 neurodegeneration What molecular mechanism causes VCP muta
ACSL4-Driven Ferroptotic Priming in Disease-Associated Oligo 0.779 alzheimers Cell type vulnerability in Alzheimers Di
LPCAT3-Mediated Lands Cycle Remodeling as the Primary Ferrop 0.777 alzheimers Cell type vulnerability in Alzheimers Di
LPCAT3-Mediated Lands Cycle Amplification of Ferroptotic Sub 0.776 alzheimers Cell type vulnerability in Alzheimers Di
ALOX15-Driven Enzymatic Ferroptosis in AD Oligodendrocytes v 0.772 alzheimers Cell type vulnerability in Alzheimers Di
LPCAT3-Mediated Lands Cycle Amplification of Ferroptotic Vul 0.764 alzheimers Cell type vulnerability in Alzheimers Di
Iron-driven lipid peroxidation and GPX4 failure create a fer 0.750 neurodegeneration What mechanisms drive the self-amplifyin
LAMP1 Overexpression to Enhance Lysosomal Capacity Independe 0.000 proteomics Quantitative proteomics of the aging syn
Cell-Type-Specific TFEB Modulation Combined with Trehalose f 0.000 proteomics Quantitative proteomics of the aging syn

Mentioning Analyses (8)

Scientific analyses that reference this entity

Why does iron chelation therapy worsen outcomes in H63D HFE variant carriers des

neurodegeneration | 2026-04-15 | 2 hypotheses Top: 0.586

What validated biomarkers can determine optimal TFEB activity windows during dis

neurodegeneration | 2026-04-11 | 0 hypotheses

Does TFEB activation directly restore mutant GBA enzyme activity or only enhance

molecular biology | 2026-04-11 | 0 hypotheses

Does TFEB dysfunction causally drive neurodegeneration or represent compensatory

molecular biology | 2026-04-10 | 0 hypotheses

Why do structurally diverse sugars (trehalose, melibiose, lactulose) produce ide

neurodegeneration | 2026-04-08 | 3 hypotheses Top: 0.470

Experiments (5)

Experimental studies targeting or related to this entity

ExperimentTypeDiseaseScoreFeasibilityModelStatusEst. Cost
SAHA@LIPO-ANG2 therapeutic efficacy in 5xFAD mice validation Alzheimer's disease 0.900 0.00 5xFAD transgenic mice proposed N/A
Transcriptomic profiling and differential expression analysis exploratory Alzheimer's disease 0.900 0.00 1-month-old APP/PS1 mice cereb proposed N/A
Irisin effects on osteogenic differentiation in mesenchymal stem cells exploratory bone fracture 0.900 0.00 mouse bone mesenchymal stem ce proposed N/A
Anti-miR-155 LNA Oligonucleotide Shifts Microglia to Homeostatic State in_vivo neurodegeneration 0.774 0.65 C57BL/6J LPS model (chronic i. proposed $58,000
Sequential DFO + Sulforaphane Prevents Iron-Ferroptosis Cascade in Rat in_vivo post-cardiac-arrest neurodegen 0.768 0.72 Sprague-Dawley rat asphyxial c abandoned $48,000

Related Papers (20)

Scientific publications cited in analyses involving this entity

Title & PMIDAuthorsJournalYearCitations
Transcriptomic cytoarchitecture reveals principles of human neocortex organizati [PMID:37824655] Jorstad NL, Close J, Johansen N, Yanny A Science 2023 186
FAK/SRC-JNK axis promotes ferroptosis via upregulating ACSL4 expression. [PMID:41862445] Qin J, Ma S, Wang J, Huang S, Luan J, He Cell death & disease 2026 0
Quercetin attenuates ox-LDL-induced endothelial injury by regulating ferroptosis [PMID:41902795] Gao C, Liu B, Zhang R, Tian J, Xin H Toxicology mechanisms and meth 2026 0
Changes in Circulating Levels of miR-30b During Minipuberty and Puberty in Girls [PMID:40899010] Albrechtsen HM, Saritas G, Winge SB, Mai J Clin Endocrinol Metab 2026 0
Epigenetics in chronic rhinosinusitis. [PMID:41442742] Kumar N, Brar T, Lal D Curr Opin Otolaryngol Head Nec 2026 0
NEDD8 promotes the ferritinophagy and ferroptosis of neurons in ischemic stroke [PMID:41662890] Rao W, Huang Y, Li J, Chen Q, Sun J et a J Stroke Cerebrovasc Dis 2026 0
Inhibition of Ferroptosis in Prostatitis Model by Low Intensity Extracorporeal S [PMID:41714892] Lin D, Li K, Kuang W, Chen Z, Zhang M World J Mens Health 2026 0
Deciphering sorafenib resistance in hepatocellular carcinoma via ferroptotic mec [PMID:41763496] Che L, Zhu L, Zhou L, Zhou Y Biochim Biophys Acta Rev Cance 2026 0
Extracellular vesicles in type 2 diabetes exhibit elevated miR-155 cargo and Ann [PMID:41786286] Jackson G, Islam H, de Souza Teixeira AA Life Sci 2026 0
B4GALT1 deficiency attenuates steatohepatitis by regulating the PPARγ/ACSL4 axis [PMID:41860570] Chien Y, Xia R, Zhou D, Ai Y, Wu L et al Hepatol Commun 2026 0
Decoding microRNA-Protein Interaction Networks in Alzheimer's Disease: Molecular [PMID:41918207] Mishra R, Gupta JK Curr Alzheimer Res 2026 0
Di-2-ethylhexylphthalate-induced miR155-5P promotes placental ferroptosis. [PMID:41937013] Gu X, Sun F, Li Y, Yang S, Li Y Int J Biol Macromol 2026 0
Extracellular Vesicles in Obesity: From Pathophysiological Mediators to Therapeu [PMID:41977323] Pavlović N, Todorović P, Maglica M, Kopi Int J Mol Sci 2026 0
Unraveling the impact of risk factors on the ferroptosis-Alzheimer's disease lin [PMID:41498558] Singh P, Rath SL Journal of Alzheimer's disease 2026 0
Resveratrol Alleviates Intervertebral Disc Degeneration by Targeting NCOA4-Media [PMID:41873334] Song C, Wu X, Chen C, Shen B, He Y, Liu Drug design, development and t 2026 0
Pan-PPAR agonist bezafibrate alleviates psoriasis by suppressing LCN2-dependent [PMID:41662914] ["Xin R", "Zhang J", "Zhang Y", "Dai M", Free radical biology & medicin 2026 0
Acteoside alleviates sepsis-induced acute lung injury by activating the Nrf2 pat [PMID:41895086] Wang Y, Zhang W, Zhang M, Zhu Y, Wang W, Tissue & cell 2026 0
Decoding microRNA-Protein Interaction Networks in Alzheimer's Disease: Molecular [PMID:41918207] Mishra R, Gupta JK Current Alzheimer research 2026 0
Ferroptosis and microglial polarization in retinal vein occlusion: pathological [PMID:41924362] Xu J, Sun M, Wang C, Ju P, Guan XD, Xie International journal of ophth 2026 0
Enhancing TREM2 expression activates microglia and modestly mitigates tau pathol [PMID:40122810] ["Chen Kai", "Li Fuyao", "Zhang Shuwen", Journal of neuroinflammation 2025 0

Debates (8)

Multi-agent debates referencing this entity

The study shows trehalose causes lysosomal membrane permeabilization (LMP) that

closed · Rounds: 4 · Score: 0.61 · 2026-04-21

While the study establishes that trehalose-induced lysosomal permeabilization ac

closed · Rounds: 4 · Score: 0.73 · 2026-04-21

The finding that trehalase-resistant analogs and other disaccharides mimic treha

closed · Rounds: 4 · Score: 0.60 · 2026-04-21

The debate identified this as a critical mechanistic gap - TFEB may increase lys

closed · Rounds: 4 · Score: 0.30 · 2026-04-21

The core causation versus correlation debate remains unresolved despite being ce

closed · Rounds: 4 · Score: 0.50 · 2026-04-20

The debate proposed temporal TFEB modulation but identified no validated biomark

closed · Rounds: 4 · Score: 1.00 · 2026-04-20

The study shows deferiprone rescues wild-type cells but exacerbates toxicity in

closed · Rounds: 4 · Score: 0.95 · 2026-04-15

The debate highlighted TFEB's role in mitochondrial-lysosomal coupling but could

closed · Rounds: 4 · Score: 0.95 · 2026-04-03

Related Research

Hypotheses and analyses mentioning FE in their description or question text

CREB-Dependent Differential Complement Regulator Positioning for Activity-Based

Score: 0.833 · synaptic-biology · 2026-04-28

This hypothesis proposes that the CREB-BDNF-TrkB activity-dependent signaling cascade directly controls the spatial posi

Differential Complement Regulator Expression on Synaptic Membranes (CD55/CD46)

Score: 0.833 · synaptic-biology · 2026-04-21

**Molecular Mechanism and Rationale** The differential expression of complement regulators CD55 (decay-accelerating fac

Gamma entrainment repairs cross-regional phase-amplitude coupling via CA1 Schaff

Score: 0.826 · alzheimers · 2026-04-28

Auditory 40 Hz entrainment applied during NREM sleep consolidates temporal coupling between hippocampal theta oscillatio

SIRT1 Activation Couples Mitochondrial Biogenesis to Ferroptosis Suppression via

Score: 0.824 · neurodegeneration · 2026-04-17

## Mechanistic Overview SIRT1 Activation Couples Mitochondrial Biogenesis to Ferroptosis Suppression via PGC1alpha-Depen

SLC7A11 System Activation Restores Cystine Uptake and GSH Synthesis to Prevent N

Score: 0.812 · neurodegeneration · 2026-04-17

## Mechanistic Overview SLC7A11 System Activation Restores Cystine Uptake and GSH Synthesis to Prevent Neuronal and Endo

Thalamocortical Feedforward Inhibition Imposes Rhythm on Glymphatic Waste Cleara

Score: 0.808 · neuroscience · 2026-04-28

Thalamic ventrobasal nucleus GluN2B-mediated burst firing entrains cortical slow-wave oscillations (0.5-1 Hz) during NRE

Targeting the Mechanistic Link Between AQP4 Dysfunction and Ferroptosis Prevents

Score: 0.803 · neurodegeneration · 2026-04-17

## Mechanistic Overview Targeting the Mechanistic Link Between AQP4 Dysfunction and Ferroptosis Prevents Both Cytotoxic

ACSL4-Ferroptotic Priming in Stressed Oligodendrocytes Drives White Matter Degen

Score: 0.801 · alzheimers · 2026-04-05

## Mechanistic Overview ACSL4-Ferroptotic Priming in Stressed Oligodendrocytes Drives White Matter Degeneration in Alzhe

40 Hz Gamma Entrainment Gates ACSL4-Mediated Ferroptotic Priming to Selectively

Score: 0.801 · alzheimers · 2026-04-05

## Mechanistic Overview 40 Hz Gamma Entrainment Gates ACSL4-Mediated Ferroptotic Priming to Selectively Eliminate Diseas

pH-Sensitive Bispecific Antibody Targeting Transferrin Receptor for CNS Delivery

Score: 0.800 · neurodegeneration · 2026-04-22

## Mechanistic Overview pH-Sensitive Bispecific Antibody Targeting Transferrin Receptor for CNS Delivery starts from the

Hypothesis 1: MANF/CDNF Signaling as Primary Neuroprotective Effector

Score: 0.798 · neurodegeneration · 2026-04-17

## Mechanistic Overview Hypothesis 1: MANF/CDNF Signaling as Primary Neuroprotective Effector starts from the claim that

Closed-loop transcranial focused ultrasound targeting CA1 PV interneurons with r

Score: 0.797 · alzheimers · 2026-04-07

## Mechanistic Overview Closed-loop transcranial focused ultrasound targeting CA1 PV interneurons with real-time gamma f

Targeting SASP-Complement Amplification Through HIF-1α Downstream Effectors

Score: 0.793 · neurodegeneration · 2026-04-14

## Mechanistic Overview Targeting SASP-Complement Amplification Through HIF-1α Downstream Effectors starts from the clai