ai_tool 314 words KG: microglia
single-cellfoundation-modelcell-type-annotationgene-perturbationnature-methods-2024university-of-torontomulti-omicscRNA-seq
Contents

scGPT (University of Toronto)

Ai Tool Info
Tool Categorymodel
Urlhttps://github.com/bowang-lab/scGPT
Github Urlhttps://github.com/bowang-lab/scGPT
Paper Urlhttps://www.nature.com/articles/s41592-024-02201-0
Paper TitlescGPT: toward building a foundation model for single-cell multi-omics using generative AI (Nature Methods 2024)
Pricingopen_source
Maturityproduction
Open SourceTrue
LicenseMIT
Scidex Integrationnone
Last Reviewed2026-04-12
Entity Typeai_tool

Knowledge Graph

Related Hypotheses (30)

TREM2-Dependent Microglial Senescence Transition
Score: 0.69
ACSL4-Driven Ferroptotic Priming in Disease-Associated Micro
Score: 0.66
TREM2-Dependent Astrocyte-Microglia Cross-talk in Neurodegen
Score: 0.64
SASP-Driven Microglial Metabolic Reprogramming in Synaptic P
Score: 0.64
TREM2-Dependent Microglial Phagocytosis Acts as a Strain Sel
Score: 0.64

Related Analyses (2)

Cell type vulnerability in Alzheimers Disease (SEA-AD transc
neurodegeneration · completed
Which cell types show the most significant expression change
neurodegeneration · completed

Knowledge Graph (12 edges)

microglia interacts_with synapses
microglia inhibits OxPCs
microglia regulates cxcl10
microglia regulates α-synuclein
microglia associated_with Alzheimer's disease
microglia produces IL-1α
microglia produces TNF
microglia produces C1q
microglia activates neuronal death
microglia regulates neuroinflammation