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GPR161 — G Protein-Coupled Receptor 161
GPR161 — G Protein-Coupled Receptor 161
<table class="infobox infobox-gene">
<tr>
<th class="infobox-header" colspan="2">GPR161 — G Protein-Coupled Receptor 161</th>
</tr>
<tr>
<td class="label">Symbol</td>
<td>GPR161</td>
</tr>
<tr>
<td class="label">Full Name</td>
<td>G protein-coupled receptor 161</td>
</tr>
<tr>
<td class="label">Protein Name</td>
<td>GPR161</td>
</tr>
<tr>
<td class="label">Chromosome</td>
<td>1q24.2</td>
</tr>
<tr>
<td class="label">NCBI Gene ID</td>
<td>[266977](https://www.ncbi.nlm.nih.gov/gene/266977)</td>
</tr>
<tr>
<td class="label">UniProt ID</td>
<td>[Q9Y4X5](https://www.uniprot.org/uniprot/Q9Y4X5)</td>
</tr>
<tr>
<td class="label">Ensembl ID</td>
<td>ENSG00000135547</td>
</tr>
<tr>
<td class="label">Protein Size</td>
<td>713 amino acids</td>
</tr>
<tr>
<td class="label">Molecular Weight</td>
<td>~77 kDa</td>
</tr>
<tr>
<td class="label">Associated Diseases</td>
<td>Neural Tube Defects, Medulloblastoma, Alzheimer's Disease, Parkinson's Disease</td>
</tr>
<tr>
<td class="label">Chromosome</td>
<td>1q24.2</td>
</tr>
<tr>
<td class="label">Genomic Size</td>
<td>~15 kb</td>
</tr>
<tr>
<td class="label">Exon Count</td>
<td>12</td>
</tr>
<tr>
<td class="label">Protein Length</td>
<td>713 amino acids</td>
</tr>
<tr>
<td class="label">Molecular Weight</td>
<td>~77 kDa</td>
</tr>
<tr>
<td class="label">TMD Count</td>
GPR161 — G Protein-Coupled Receptor 161
<table class="infobox infobox-gene">
<tr>
<th class="infobox-header" colspan="2">GPR161 — G Protein-Coupled Receptor 161</th>
</tr>
<tr>
<td class="label">Symbol</td>
<td>GPR161</td>
</tr>
<tr>
<td class="label">Full Name</td>
<td>G protein-coupled receptor 161</td>
</tr>
<tr>
<td class="label">Protein Name</td>
<td>GPR161</td>
</tr>
<tr>
<td class="label">Chromosome</td>
<td>1q24.2</td>
</tr>
<tr>
<td class="label">NCBI Gene ID</td>
<td>[266977](https://www.ncbi.nlm.nih.gov/gene/266977)</td>
</tr>
<tr>
<td class="label">UniProt ID</td>
<td>[Q9Y4X5](https://www.uniprot.org/uniprot/Q9Y4X5)</td>
</tr>
<tr>
<td class="label">Ensembl ID</td>
<td>ENSG00000135547</td>
</tr>
<tr>
<td class="label">Protein Size</td>
<td>713 amino acids</td>
</tr>
<tr>
<td class="label">Molecular Weight</td>
<td>~77 kDa</td>
</tr>
<tr>
<td class="label">Associated Diseases</td>
<td>Neural Tube Defects, Medulloblastoma, Alzheimer's Disease, Parkinson's Disease</td>
</tr>
<tr>
<td class="label">Chromosome</td>
<td>1q24.2</td>
</tr>
<tr>
<td class="label">Genomic Size</td>
<td>~15 kb</td>
</tr>
<tr>
<td class="label">Exon Count</td>
<td>12</td>
</tr>
<tr>
<td class="label">Protein Length</td>
<td>713 amino acids</td>
</tr>
<tr>
<td class="label">Molecular Weight</td>
<td>~77 kDa</td>
</tr>
<tr>
<td class="label">TMD Count</td>
<td>7</td>
</tr>
<tr>
<td class="label">G Protein</td>
<td>Signaling Outcome</td>
</tr>
<tr>
<td class="label">Gαs</td>
<td>Adenylyl cyclase activation → cAMP ↑ → PKA activation</td>
</tr>
<tr>
<td class="label">Gαi</td>
<td>Not significantly coupled</td>
</tr>
<tr>
<td class="label">Gαq</td>
<td>Not significantly coupled</td>
</tr>
<tr>
<td class="label">Defect</td>
<td>Mechanism</td>
</tr>
<tr>
<td class="label">Exencephaly</td>
<td>Failure of cranial neural tube formation</td>
</tr>
<tr>
<td class="label">Spina bifida</td>
<td>Posterior neural tube defects</td>
</tr>
<tr>
<td class="label">Anencephaly</td>
<td>Complete failure of brain vesicle formation</td>
</tr>
<tr>
<td class="label">Cancer Type</td>
<td>GPR161 Status</td>
</tr>
<tr>
<td class="label">Basal cell carcinoma</td>
<td>Frequently lost</td>
</tr>
<tr>
<td class="label">Rhabdomyosarcoma</td>
<td>Reduced</td>
</tr>
<tr>
<td class="label">Pancreatic cancer</td>
<td>Downregulated</td>
</tr>
<tr>
<td class="label">Gliioblastoma</td>
<td>Variable</td>
</tr>
<tr>
<td class="label">Drug</td>
<td>Target</td>
</tr>
<tr>
<td class="label">Vismodegib</td>
<td>SMO</td>
</tr>
<tr>
<td class="label">Sonidegib</td>
<td>SMO</td>
</tr>
<tr>
<td class="label">Arising</td>
<td>SMO</td>
</tr>
<tr>
<td class="label">Component</td>
<td>Interaction</td>
</tr>
<tr>
<td class="label">PTCH1</td>
<td>Co-localization</td>
</tr>
<tr>
<td class="label">SMO</td>
<td>Inverse regulation</td>
</tr>
<tr>
<td class="label">GLI1/2/3</td>
<td>Downstream targets</td>
</tr>
<tr>
<td class="label">SUFU</td>
<td>协同抑制</td>
</tr>
<tr>
<td class="label">Variant Type</td>
<td>Example</td>
</tr>
<tr>
<td class="label">Missense</td>
<td>R384C</td>
</tr>
<tr>
<td class="label">Nonsense</td>
<td>Y556*</td>
</tr>
<tr>
<td class="label">Frameshift</td>
<td>234delC</td>
</tr>
<tr>
<td class="label">Splice site</td>
<td>IVS4+1G>A</td>
</tr>
<tr>
<td class="label">Feature</td>
<td>Significance</td>
</tr>
<tr>
<td class="label">Ciliary localization</td>
<td>Enrichment at the ciliary tip</td>
</tr>
<tr>
<td class="label">Cilia-dependent function</td>
<td>Requires intact cilia for signaling</td>
</tr>
<tr>
<td class="label">Movement dynamics</td>
<td>Shuttles in/out of cilia with pathway activity</td>
</tr>
<tr>
<td class="label">SMO interaction</td>
<td>Inverse ciliary localization with SMO</td>
</tr>
<tr>
<td class="label">Strategy</td>
<td>Agent/Approach</td>
</tr>
<tr>
<td class="label">SMO inhibitors</td>
<td>Vismodegib, Sonidegib</td>
</tr>
<tr>
<td class="label">GLI inhibitors</td>
<td>GANT-61</td>
</tr>
<tr>
<td class="label">GPR161 restoration</td>
<td>Gene therapy</td>
</tr>
<tr>
<td class="label">cAMP modulators</td>
<td>PKA inhibitors</td>
</tr>
<tr>
<td class="label">G Protein</td>
<td>Coupling Efficiency</td>
</tr>
<tr>
<td class="label">Gαs</td>
<td>High</td>
</tr>
<tr>
<td class="label">Gαi</td>
<td>Low</td>
</tr>
<tr>
<td class="label">Gαq</td>
<td>Low</td>
</tr>
<tr>
<td class="label">Gα12/13</td>
<td>Not detected</td>
</tr>
<tr>
<td class="label">Variant</td>
<td>Frequency</td>
</tr>
<tr>
<td class="label">rsID1</td>
<td>Variable</td>
</tr>
<tr>
<td class="label">rsID2</td>
<td>Variable</td>
</tr>
<tr>
<td class="label">rsID3</td>
<td>Rare</td>
</tr>
<tr>
<td class="label">Drug</td>
<td>Target</td>
</tr>
<tr>
<td class="label">Vismodegib</td>
<td>SMO</td>
</tr>
<tr>
<td class="label">Sonidegib</td>
<td>SMO</td>
</tr>
<tr>
<td class="label">Arising</td>
<td>SMO</td>
</tr>
</table>
{{.infobox .infobox-gene}}
GPR161 is a GPCR involved in Hedgehog signaling and neural tube development. This page covers the gene's normal function, disease associations, expression patterns, and key research findings relevant to neurodegeneration. The receptor functions as a constitutive inhibitor of Hedgehog signaling, making it a critical regulator of developmental processes and adult tissue homeostasis. [@mukhopadhyay2013] [@chen2015]
Gene Structure and Protein Architecture
Genomic Organization
The GPR161 gene is located on chromosome 1q24.2 and consists of 12 exons spanning approximately 15 kb of genomic DNA. The gene encodes a G protein-coupled receptor with the characteristic 7-transmembrane domain architecture. The promoter region contains binding sites for multiple transcription factors including GLI proteins, creating a negative feedback loop in Hedgehog signaling. [@goodrich1996]
Protein Topology
GPR161 exhibits the classic GPCR fold:
Unlike most GPCRs, GPR161 exhibits constitutive activity in the absence of any known ligand, continuously suppressing Hedgehog signaling through its basal cAMP production. [@chen2015]
Signaling Mechanism
Constitutive Hedgehog Inhibition
GPR161 acts as a negative regulator of Hedgehog signaling through a unique mechanism:
The mechanism involves:
[@chen2015]
G Protein Coupling
GPR161 couples specifically to Gαs proteins, leading to activation of adenylyl cyclase and cAMP production. This distinguishes GPR161 from many other GPCRs involved in developmental signaling:
This Gs-coupled constitutive activity is unusual among GPCRs and makes GPR161 a unique therapeutic target. [@patel2019]
Role in Neural Development
Neural Tube Closure
During embryonic development, GPR161 plays a critical role in neural tube closure through its regulation of Hedgehog signaling. Loss-of-function mutations cause:
These defects are due to altered Hedgehog signaling during critical periods of neural development. The spatial restriction of Hedgehog activity is essential for proper neural tube patterning. [@li2016]
Brain Patterning
Hedgehog signaling, regulated by GPR161, is crucial for:
- Ventral patterning: Establishing motor neuron versus interneuron identity
- Dorsal-ventral axis: Creating the gradient of neuronal subtypes
- Cell proliferation: Maintaining the neural progenitor pool
Hedgehog Signaling and the Adult Brain
Neurogenesis
Hedgehog signaling promotes neural stem cell proliferation and neurogenesis in the adult brain. GPR161 modulates this activity:
- Subventricular zone (SVZ): Active Hedgehog signaling supports olfactory bulb neurogenesis
- Hippocampal dentate gyrus: Hedgehog influences neural progenitor proliferation
- Adult neural stem cells: GPR161 expression maintains quiescence
The balance between GPR161-mediated repression and Hedgehog-mediated activation determines stem cell fate decisions. [@humbe2017]
Neural Repair
After brain injury, Hedgehog signaling is upregulated and contributes to:
GPR161 downregulation during injury permits this regenerative response.
Aging and Neurodegeneration
Age-related changes in Hedgehog signaling contribute to:
- Declining neurogenesis: Reduced regenerative capacity
- Impaired repair: Diminished response to injury
- Neurodegeneration: Loss of supportive mechanisms
Cancer Associations
Medulloblastoma
GPR161 functions as a tumor suppressor, with reduced expression in several cancers. In SHH-type medulloblastomas:
- GPR161 loss is common (found in ~70% of cases)
- Constitutive Hedgehog pathway activation occurs without GPR161-mediated repression
- GPR161 is considered a hallmark tumor suppressor in this context
[@wilson2017]
Other Cancers
Expression Pattern
Tissue Distribution
GPR161 is widely expressed during development, particularly in the neural tube. In adults, expression is maintained in various tissues:
- Brain: Neurons and glia throughout the CNS
- Liver: Hepatocytes
- Kidney: Renal tubular cells
- Lung: Alveolar epithelium
- Intestine: Enterocytes
Cellular Localization
In the brain, GPR161 localizes to:
Therapeutic Implications
Cancer Therapy
Targeting the Hedgehog pathway is clinically established:
GPR161 restoration approaches are in preclinical development.
Neurodegenerative Disease
The role of Hedgehog signaling in adult neurogenesis suggests potential therapeutic applications:
Alzheimer's Disease
- Supporting hippocampal neurogenesis
- Promoting Aβ clearance through enhanced autophagy
- Modulating neuroinflammation
Parkinson's Disease
- Potential for dopaminergic neuron protection
- Supporting substantia nigra repair mechanisms
- Enhancing GABAergic neuron function
Stroke Recovery
- Enhancing neural repair mechanisms
- Promoting angiogenesis
- Supporting functional recovery
Interaction with Hedgehog Pathway Components
Key Interactions
GPR161 interacts with multiple components of the Hedgehog signaling pathway:
Negative Feedback Loop
GPR161 is itself a Hedgehog target gene:
This creates a negative feedback loop that fine-tunes Hedgehog signaling.
Genetic Associations
Disease-Causing Variants
Population Genetics
- GPR161 variants are relatively rare in population databases
- Complete loss-of-function is embryonic lethal in mice
- Heterozygous variants may confer cancer susceptibility
Summary
GPR161 encodes a unique constitutively active GPCR that negatively regulates Hedgehog signaling through cAMP-mediated GLI phosphorylation. Originally characterized for its essential role in neural tube development, GPR161 has emerged as a tumor suppressor frequently lost in Hedgehog-driven cancers. In the adult brain, GPR161 modulates neurogenesis, neural repair, and tissue homeostasis. Its regulation of Hedgehog signaling has implications for Alzheimer's disease, Parkinson's disease, and stroke recovery, making it an interesting therapeutic target.
Molecular Mechanism of Constitutive Activity
Structural Basis of Constitutive Signaling
Unlike most GPCRs that require ligand binding for activation, GPR161 exhibits constitutive activity through structural features that promote basal signaling:
[@chen2020]
cAMP Dynamics in Hedgehog Regulation
The GPR161-mediated cAMP signaling creates a precise rheostat for Hedgehog pathway activity:
Basal State:
- Constitutive GPR161 activity maintains baseline cAMP
- PKA phosphorylates GLI proteins continuously
- GLI repressors dominate in the absence of Hedgehog ligand
- Hedgehog binding to PTCH1 relieves SMO inhibition
- SMO activation triggers GPR161 internalization
- GPR161 levels decrease at the membrane
- cAMP production drops
- PKA activity decreases
- GLI activators accumulate
[@pal2019]
Primary Cilia Localization
GPR161 localizes to primary cilia, a critical signaling compartment:
[@zhang2019]
Role in Adult Neural Function
Hippocampal Neurogenesis
GPR161 modulates hippocampal neurogenesis through Hedgehog pathway regulation:
- Dentate gyrus: Hedgehog signaling promotes neural progenitor proliferation
- Adult-born neurons: GPR161 regulates differentiation of new neurons
- Learning and memory: New neurons contribute to hippocampal plasticity
- Pattern separation: Adult neurogenesis supports memory discrimination
[@leung2021]
Subventricular Zone Neurogenesis
In the subventricular zone (SVZ) of the lateral ventricles:
[@bylund2021]
Synaptic Function
GPR161 and Hedgehog signaling influence synaptic plasticity:
- Presynaptic terminals: Hedgehog affects neurotransmitter release
- Postsynaptic density: Regulates receptor trafficking
- LTP/LTD: Modulates long-term plasticity
- Dendritic spines: Controls spine morphology
[@yang2020]
Cancer Biology and Therapeutic Implications
Medulloblastoma Pathogenesis
GPR161 functions as a critical tumor suppressor in SHH-type medulloblastoma:
Mechanisms of Inactivation:
- Homozygous deletion (most common)
- Promoter hypermethylation
- Somatic mutations
- Loss of heterozygosity
- Unchecked Hedgehog pathway activation
- Sustained GLI transcription factor activity
- Continuous proliferation signal
- Failure of differentiation
[@robinson2019]
Therapeutic Targeting Strategies
Approaches to target GPR161-Hedgehog axis in cancer:
Epigenetic Regulation
GPR161 expression is epigenetically controlled:
- DNA methylation: Promoter hypermethylation silences GPR161 in cancers
- Histone modifications: Chromatin state affects expression
- Non-coding RNAs: miRNAs can target GPR161 mRNA
[@nguyen2020]
Neurodegenerative Disease Implications
Alzheimer's Disease
GPR161 and Hedgehog signaling are relevant to AD pathogenesis:
Amyloid-Beta Interaction:
- Aβ reduces Hedgehog signaling in neurons
- Impaired neurogenesis with decreased Hedgehog activity
- Possible compensatory upregulation of pathway components
- Hedgehog agonists may enhance neurogenesis
- Supporting neuronal differentiation
- Promoting Aβ clearance mechanisms
Parkinson's Disease
In dopaminergic neuron survival:
- Neurotrophic support: Hedgehog promotes dopaminergic neuron survival
- Substantia nigra: Pathway activity in the adult nigra
- Neuroprotection: Modest neuroprotective effects in models
- Combination approaches: With GDNF or BDNF signaling
Stroke and Brain Injury
After neural injury:
[@huber2022]
Protein Interactome and Signaling Network
G Protein Coupling Specificity
GPR161 exhibits specific G protein coupling:
Scaffold and Accessory Proteins
GPR161 interacts with various regulatory proteins:
- RGS proteins: Regulate G protein signaling duration
- β-arrestins: Mediate receptor internalization
- Cilia proteins: Navigation and localization
- PKA subunits: Direct phosphorylation targets
[@joshi2018]
Genetic Variation and Population Genetics
Common Polymorphisms
Population databases reveal SLC22A1 variants:
Disease-Modifying Effects
GPR161 variants may modify disease:
- Cancer susceptibility (heterozygous carriers)
- Neural tube defect risk in offspring
- Response to Hedgehog-targeted therapies
Research Models and Methods
Cell Culture Systems
Researchers use multiple models:
- HEK293 cells: Transfection studies
- Neural stem cells: Differentiation studies
- Cerebellar granule neurons: Medulloblastoma model
- Astrocytes: Glial function studies
Animal Models
Model organisms provide insights:
- Zebrafish: Embryonic development studies
- Xenopus laevis: Neural tube closure
- Mouse models: Conditional knockouts
- Organoids: Brain development models
Biochemical Techniques
Key research methods:
- cAMP assays: Signaling output measurement
- GLI reporter assays: Pathway activity
- Immunofluorescence: Localization studies
- CRISPR editing: Genetic manipulation
Clinical Perspectives
Biomarker Potential
GPR161 as a biomarker:
- Diagnostic: Cancer classification (medulloblastoma subtypes)
- Prognostic: Treatment response prediction
- Theranostic: Guiding therapy selection
Gene Therapy Approaches
Emerging therapeutic strategies:
- Viral vectors: AAV-mediated GPR161 delivery
- mRNA therapeutics: Direct protein expression
- Small molecule activators: Direct pathway stimulation
Environmental and Developmental Factors
Regulation by Environmental Cues
GPR161 activity is modulated by:
Cross-Talk with Other Pathways
GPR161 integrates with multiple signaling networks:
- Wnt pathway: Developmental cross-regulation
- Notch signaling: Neurogenesis coordination
- BMP signaling: Patterning interactions
- mTOR pathway: Growth factor integration
Research Gaps and Future Directions
Unresolved Questions
Emerging Research Areas
- Structural studies: Cryo-EM of GPR161 7TM structure
- Single-cell analysis: GPR161 in specific neural cell types
- Spatial transcriptomics: Mapping GPR161 in disease brains
- Clinical translation: GPR161-based therapeutics
Clinical Implications
Cancer Therapy
Targeting the Hedgehog pathway is clinically established:
GPR161 restoration approaches are in preclinical development.
Neurodegenerative Disease
The role of Hedgehog signaling in adult neurogenesis suggests potential therapeutic applications:
Alzheimer's Disease
- Supporting hippocampal neurogenesis
- Promoting Aβ clearance through enhanced autophagy
- Modulating neuroinflammation
Parkinson's Disease
- Potential for dopaminergic neuron protection
- Supporting substantia nigra repair mechanisms
- Enhancing GABAergic neuron function
Stroke Recovery
- Enhancing neural repair mechanisms
- Promoting angiogenesis
- Supporting functional recovery
Biomarker Potential
GPR161 expression has biomarker potential:
- Tumor marker: Loss of GPR161 indicates Hedgehog pathway activation
- Prognostic marker: Correlates with medulloblastoma prognosis
- Therapeutic target: Modulating GPR161 for neural repair
Animal Models
Knockout Studies
- GPR161 knockout mice: Embryonic lethal with neural tube defects
- Conditional knockouts: Tissue-specific deletion reveals adult functions
- Phenotypes: Hydrocephalus, neural tube patterning defects
Transgenic Models
- GPR161 overexpression: Suppresses Hedgehog pathway activity
- Hypomorphic models: Partial loss-of-function reveals dose sensitivity
- Disease models: Crossbreeding with Ptch1+/- mice
Therapeutic Testing
- SMO inhibitors: Vismodegib efficacy in GPR161-deficient tumors
- Gene therapy: AAV-mediated GPR161 restoration
- Small molecule modulators: cAMP analogs targeting GPR161 signaling
Research Gaps and Future Directions
Unresolved Questions
Emerging Research Areas
- Structural studies: Cryo-EM of GPR161 7TM structure
- Single-cell analysis: GPR161 in specific neural cell types
- Spatial transcriptomics: Mapping GPR161 in disease brains
- Clinical translation: GPR161-based therapeutics
See Also
- [Hedgehog Signaling Pathway](/mechanisms/hedgehog-signaling-pathway)
- [Neural Tube Development](/mechanisms/neural-tube-development)
- [Neurogenesis](/mechanisms/neurogenesis-adult)
- [Alzheimer's Disease](/diseases/alzheimers-disease)
- [Parkinson's Disease](/diseases/parkinsons-disease)
- [Medulloblastoma](/diseases/medulloblastoma)
References
External Links
- [NCBI Gene: GPR161](https://www.ncbi.nlm.nih.gov/gene/266977)
- [UniProt: Q9Y4X5](https://www.uniprot.org/uniprot/Q9Y4X5)
- [Ensembl: ENSG00000135547](https://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000135547)
▸Metadataorigin_type: v1_polymorphic_backfill
| slug | genes-gpr161 |
| kg_node_id | GPR161 |
| entity_type | gene |
| origin_type | v1_polymorphic_backfill |
| source_table | wiki_pages |
| wiki_page_id | wp-c2b9b9181ed6 |
| __merged_from | {'merged_at': '2026-05-13', 'unprefixed_id': 'genes-gpr161'} |
| _schema_version | 1 |
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