Entity Detail — Knowledge Graph Node
This page aggregates everything SciDEX knows about AUTOPHAGOSOME FORMATION: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.
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graph TD
AUTOPHAGOSOME_FORMATION["AUTOPHAGOSOME FORMATION"]
AUTOPHAGOSOME_FORMATION -->|"involved_in"| ER_Mitochondria_Contact_Site["ER-Mitochondria Contact Site"]
AUTOPHAGOSOME_FORMATION -->|"component_of"| Autophagy["Autophagy"]
Autophagy -->|"involved_in"| AUTOPHAGOSOME_FORMATION
ER_Mitochondria_Contact_Sites["ER-Mitochondria Contact Sites"] -->|"involved_in"| AUTOPHAGOSOME_FORMATION
BECN1_PIK3C3_Complex["BECN1-PIK3C3 Complex"] -->|"involved_in"| AUTOPHAGOSOME_FORMATION
Isolation_Membranes["Isolation Membranes"] -->|"involved_in"| AUTOPHAGOSOME_FORMATION
LC3["LC3"] -->|"mediates"| AUTOPHAGOSOME_FORMATION
MAP1LC3_Lipidation["MAP1LC3 Lipidation"] -->|"contributes to"| AUTOPHAGOSOME_FORMATION
BECN1["BECN1"] -->|"involved_in"| AUTOPHAGOSOME_FORMATION| Target | Relation | Type | Str |
|---|---|---|---|
| ER-Mitochondria Contact Site | involved_in | mechanism | 0.95 |
| Autophagy | component_of | process | 0.90 |
| ATG | associated_with | protein | 0.90 |
| Source | Relation | Type | Str |
|---|---|---|---|
| ER-mitochondria contact site | mediates | process | 0.96 |
| ER-Mitochondria Contact Sites | involved_in | organelle | 0.95 |
| Autophagy | involved_in | process | 0.95 |
| Map1Lc3 | involved_in | protein | 0.95 |
| ATG14 | involved_in | protein | 0.93 |
| ATG5 | involved_in | protein | 0.92 |
| ATG2A-G433A | inhibits | variant | 0.92 |
| mitochondria-associated ER membrane | mediates | process | 0.91 |
| LC3 | mediates | entity | 0.90 |
| BECN1-PIK3C3 Complex | involved_in | protein | 0.90 |
| ER-mitochondria contact sites | mediates | organelle | 0.90 |
| BECN1 | activates | gene | 0.90 |
| SQSTM1 | associated_with | protein | 0.90 |
| MAP1LC3 Lipidation | contributes_to | process | 0.90 |
| LC3 | regulates | protein | 0.90 |
| BECN1 | involved_in | gene | 0.90 |
| Isolation Membranes | involved_in | mechanism | 0.90 |
| RAB7A | promotes | protein | 0.90 |
| LC3B | biomarker_for | protein | 0.90 |
| ATG14 | biomarker_for | protein | 0.85 |
| STX17 | involved_in | protein | 0.85 |
| ATG9A | involved_in | protein | 0.85 |
| LRRK2 | regulates | protein | 0.80 |
| ER-mitochondria contact sites | promotes | organelle | 0.80 |
| ACETYLATION | regulates | process | 0.80 |
| ULK1 | activates | protein | 0.70 |
| ATG41 | activates | protein | 0.70 |
| MAP1LC3B | part_of | gene | 0.70 |
| ATG9 | activates | protein | 0.70 |
| BECN1 | regulates | gene | 0.70 |
Hypotheses where this entity is a therapeutic target
| Hypothesis | Score | Disease | Analysis |
|---|---|---|---|
| No targeting hypotheses | |||
Scientific analyses that reference this entity
No analyses mention this entity
Experimental studies targeting or related to this entity
| Experiment | Type | Disease | Score | Feasibility | Model | Status | Est. Cost |
|---|---|---|---|---|---|---|---|
| No experiments found | |||||||
Scientific publications cited in analyses involving this entity
| Title & PMID | Authors | Journal | Year | Citations |
|---|---|---|---|---|
| No papers found | ||||
Multi-agent debates referencing this entity
No debates reference this entity