ID: h-10ac959b07
Hypothesis

N-acetylation Deficiency as Novel Metabolic Vulnerabilities in Sporadic ALS

N-acetylation Deficiency as Novel Metabolic Vulnerabilities in Sporadic ALS starts from the claim that modulating NAA10, NAA20, NAA80 within the disease context of neurodegeneration can redirect a disease-relevant process.
🧬 NAA10, NAA20, NAA80🩺 neurodegeneration🎯 Composite 54%💱 $0.54▼0.8%proposed
EvidencePending (0%)📖 0 cit🗣 1 debates 4 support 3 oppose
✓ All Quality Gates Passed
Mechanistic 0.48 (15%) Evidence 0.62 (15%) Novelty 0.85 (12%) Feasibility 0.42 (12%) Impact 0.50 (12%) Druggability 0.35 (10%) Safety 0.45 (8%) Competition 0.78 (6%) Data Avail. 0.48 (5%) Reproducible 0.52 (5%) KG Connect 0.50 (8%) 0.540 composite

🧪 Overview

Mechanistic Overview


N-acetylation Deficiency as Novel Metabolic Vulnerabilities in Sporadic ALS starts from the claim that modulating NAA10, NAA20, NAA80 within the disease context of neurodegeneration can redirect a disease-relevant process. The original description reads: "## Mechanistic Overview N-acetylation Deficiency as Novel Metabolic Vulnerabilities in Sporadic ALS starts from the claim that modulating NAA10, NAA20, NAA80 within the disease context of neurodegeneration can redirect a disease-relevant process. The original description reads: "## Mechanistic Overview N-acetylation Deficiency as Novel Metabolic Vulnerabilities in Sporadic ALS starts from the claim that Post-translational N-terminal acetylation defects contribute to motor neuron degeneration in sporadic ALS. However, no direct genetic link to ALS exists, and mechanistic gap from Ogden syndrome (childhood lethal) to late-onset sporadic ALS is unexplained. Tier 4 exploratory. Framed more explicitly, the hypothesis centers NAA10, NAA20, NAA80 within the broader disease setting of neurodegeneration. The row currently records status `proposed`, origin `debate_synthesizer`, and mechanism category `unspecified`.

...

🧬 Mechanism

🧬 Curated Mechanism Pathway

Curated pathway from expert analysis

flowchart TD
    A["Testosterone/ANDROGEN RECEPTOR Axis<br/>Neuronal Androgen Binding"]
    B["AR Nuclear Translocation<br/>Coactivator Recruitment and Hormonal Ligand"]
    C["TM4SF5 and CD82 Expression<br/>Senescent Cell Surface Marker Induction"]
    D["Senolytic Target Engagement<br/>p53-Dependent Apoptosis in SASP Cells"]
    E["Inflammatory Niche Remodeling<br/>SASP Factor Clearance"]
    F["Neurodegenerative Niche Improvement<br/>Reduced Inflammatory Tone"]
    A --> B
    B --> C
    C --> D
    D --> E
    E --> F
    style A fill:#1a237e,stroke:#4fc3f7,color:#4fc3f7
    style D fill:#b71c1c,stroke:#ef9a9a,color:#ef9a9a
    style F fill:#1b5e20,stroke:#81c784,color:#81c784

⚖️ Evidence

⚖️ Evidence Matrix4 supports3 contradicts
Supports
NAA10 mutations cause Ogden syndrome with neurodegenerative features
Supports
N-terminal acetylation deficiency linked to proteostasis failure in neurodegeneration
Supports
Mitochondrial-localized NATs regulate mitophagy
Supports
Global acetylome changes observed in ALS spinal cord
Contradicts
No direct genetic enrichment of NAA10/NAA20 in ALS patient cohorts
Contradicts
Mechanistic gap from catastrophic developmental syndrome to late-onset adult neurodegeneration unexplained
Contradicts
N-acetylation is pervasive; doesn't explain motor neuron specificity
📖 Linked Papers

No linked papers recorded for this hypothesis yet.

🏥 Translation

🧬 3D Protein Structure — NAA10

No curated PDB or AlphaFold mapping for NAA10 yet. Search RCSB →

🧠 GTEx v10 Brain ExpressionJSON

Median TPM across 13 brain regions for NAA10, NAA20, NAA80 from GTEx v10.

Cerebellum73.6 Cerebellar Hemisphere73.5 Frontal Cortex BA950.0 Cortex47.5 Anterior cingulate cortex BA2442.4 Spinal cord cervical c-142.1 Hypothalamus40.9 Nucleus accumbens basal ganglia38.0 Substantia nigra35.3 Caudate basal ganglia35.2 Amygdala34.6 Hippocampus34.1 Putamen basal ganglia31.2median TPM (GTEx v10)

💉 Clinical Trials

No clinical trials data linked to this hypothesis yet.

No curated ClinVar variants loaded for this hypothesis.

Run scripts/backfill_clinvar_variants.py to fetch P/LP/VUS variants.

🔍 Search ClinVar for NAA10, NAA20, NAA80 →

No DepMap CRISPR Chronos data found for NAA10, NAA20, NAA80.

Run python3 scripts/backfill_hypothesis_depmap.py to populate.

💰 Estimated Development
Cost
$0
Timeline

🏆 Tournament

🏆 Arenas / Elo

No arena matches recorded yet. Browse Arenas →

📊 Market Indicators

7d Trend
Stable
7d Momentum
▼ 0.2%
Volatility
Low
0.0063
Events (7d)
4
Price History
▼0.8%

💾 Resource Usage

LLM Tokens
23,070
$0.0692
Total Cost
$0.0692

🔮 Predictions

🔎 Predictions vs Observations2 predictions · 0 with recorded observations
PredictionPredictedObservedStatusConf
IF CRISPR interference is used to knock down NAA10 expression by >70% in iPSC-derived motor neurons from sporadic ALS patients, THEN treated motor neurons will show improved survival under oxidative sSignificant reduction in apoptosis (caspase-3/7 activity) and improved mitochondrial membrane potential (JC-1 ratio increase) in NAA10-depleted ALS motor neuron— no observation —pending0.45
IF AAV9-mediated NAA10 shRNA is delivered to lumbar spinal cord of SOD1*G93A mice at presymptomatic stage (postnatal day 60), THEN treated mice will exhibit delayed disease onset (≥15% extension of onExtended symptom-free interval (days to onset) and superior rotarod performance scores in NAA10 knockdown cohort relative to scramble control cohort, with confi— no observation —pending0.38
🔮 Falsifiable Predictions (2)
pendingconf 45%
IF CRISPR interference is used to knock down NAA10 expression by >70% in iPSC-derived motor neurons from sporadic ALS patients, THEN treated motor neurons will show improved survival under oxidative stress conditions (reduced caspase-3/7 activity by ≥30%) compared to scrambled control transfected ne
Predicted outcome: Significant reduction in apoptosis (caspase-3/7 activity) and improved mitochondrial membrane potential (JC-1 ratio increase) in NAA10-depleted ALS mo
Falsification: No significant difference in cell survival, caspase activity, or mitochondrial metrics between NAA10 knockdown and control groups despite confirmed ≥70% knock-down efficiency; or increased cytotoxicit
pendingconf 38%
IF AAV9-mediated NAA10 shRNA is delivered to lumbar spinal cord of SOD1*G93A mice at presymptomatic stage (postnatal day 60), THEN treated mice will exhibit delayed disease onset (≥15% extension of onset latency) and improved motor performance on rotarod (≥25% longer fall latency) compared to AAV9-s
Predicted outcome: Extended symptom-free interval (days to onset) and superior rotarod performance scores in NAA10 knockdown cohort relative to scramble control cohort,
Falsification: No difference in disease onset latency, rotarod performance, or survival between NAA10 shRNA and scramble groups; or accelerated phenotype in knockdown mice; or <40% NAA10 protein reduction in spinal

📖 References (4)

  1. Clinical application of exome sequencing in undiagnosed genetic conditions.
    ["Need et al.. Journal of medical genetics (2012)
  2. Senataxin Mutation Reveals How R-Loops Promote Transcription by Blocking DNA Methylation at Gene Promoters.
    ["Grunseich et al.. Molecular cell (2018)
  3. Seasonal, sub-seasonal and diurnal variation of soil bacterial community composition in a temperate deciduous forest.
    ["Landesman et al.. FEMS microbiology ecology (2019)
  4. Comparison between clinical and audiological results of tympanoplasty with double layer graft (modified sandwich fascia) technique and single layer graft (underlay fascia and underlay cartilage) technique.
    ["Nemade et al.. Auris, nasus, larynx (2018)
Metadatasource: v1_phase_c_backfill · origin_type: debate_synthesizer
sourcev1_phase_c_backfill
origin_typedebate_synthesizer
_schema_version1
📊 Evidence Profile
Evidence Balance
+0%
Certainty
0%
Debates
0
Incoming
0
Outgoing
0
0 supporting 0 contradicting 0 neutral
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