gene 960 words KG: HDAC3 2026-03-24
kind:genesection:genesstate:published
Contents

HDAC3 Gene

🧬 Gene Info
Gene SymbolHDAC3
Full NameHistone Deacetylase 3
Chromosome5q31.3.
Protein TypeEpigenetic Regulator
Target ClassEpigenetic Regulator
FunctionHDAC3 encodes histone deacetylase 3, a class I histone deacetylase that catalyzes the removal of acetyl groups from lysine residues on histone proteins.
Mechanism of ActionSmall molecule inhibitor of histone deacetylase enzymatic activity
Primary ExpressionUbiquitous with highest expression in brain
DruggabilityLow (0.41)
Clinical StageApproved
Molecular Weight33 kDa
Amino Acids428 aa
PathwaysAutophagy, Epigenetic, Memory, Neuroprotection, Oxidative Stress
UniProt IDO15379
Ensembl IDENSG00000171720
OMIM605166
GeneCardsHDAC3
Human Protein AtlasHDAC3
Associated DiseasesAGING, ALS, Alzheimer, Alzheimer'S Disease, Cancer
Known Drugs/CompoundsKaempferol, NICOTINAMIDE, H3K9, nicotinamide, valproic acid, acetate
InteractionsTRKB, BDNF, BMAL1, NRF1, NRF2, TNF
SciDEX TargetView Target Profile (8 clinical trials)
SciDEX HypothesesSelective HDAC3 Inhibition with Cognitive Enhancem
HDAC3-Selective Inhibition for Clock Reset
KG Connections1113 knowledge graph edges
DatabasesGeneCardsNCBI GeneHPASTRING

Knowledge Graph

Related Hypotheses (27)

SASP-Mediated Complement Cascade Amplification
Score: 0.70
HDAC3-Selective Inhibition for Clock Reset
Score: 0.46
Selective HDAC3 Inhibition with Cognitive Enhancement
Score: 0.56
Hippocampal CA3-CA1 circuit rescue via neurogenesis and syna
Score: 0.68
CYP46A1 Overexpression Gene Therapy
Score: 0.63

Related Analyses (13)

Epigenetic reprogramming in aging neurons
neurodegeneration · archived
Epigenetic clocks and biological aging in neurodegeneration
neurodegeneration · archived
Astrocyte reactivity subtypes in neurodegeneration
neurodegeneration · archived
Microglia-astrocyte crosstalk amplification loops in neurode
neurodegeneration · archived
APOE4 structural biology and therapeutic targeting strategie
neurodegeneration · archived

Related Experiments (16)

Proposed experiment from debate on Epigenetic clocks and bio
falsification · proposed · Score: 0.40
Proposed experiment from debate on Microglia activate astroc
falsification · proposed · Score: 0.40
Proposed experiment from debate on Synaptic pruning by micro
falsification · proposed · Score: 0.40
Proposed experiment from debate on Senolytics targeting p16/
falsification · proposed · Score: 0.40
Mechanism: Why Does Amyloid Removal Only Slow Decline 27%?
clinical · proposed · Score: 0.40

See Also (15)

Aging vs Neurodegeneration: Mechanistic Comparison Matr
mechanism · KG edge: activates
Alzheimer Indonesia
institution · KG edge: activates
ABCA1 - ATP-Binding Cassette Transporter A1
gene · KG edge: activates
Amyloid-Related Imaging Abnormalities (ARIA)
entity · KG edge: activates
Wnt/β-Catenin Signaling Pathway in Neurodegeneration
mechanism · Pages share 3 hypotheses

Knowledge Graph (12 edges)

HDAC3 regulates MECP2
HDAC3 regulates STROKE
HDAC3 associated_with neurodegeneration
HDAC3 co_discussed TET2
HDAC3 co_discussed KDM6A
HDAC3 co_discussed SIRT6
HDAC3 co_discussed DNMT1
HDAC3 co_discussed FOXO3
HDAC3 expressed_in HDAC6
HDAC3 regulates SIRT4