Entity Detail — Knowledge Graph Node
This page aggregates everything SciDEX knows about HTR3C: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.
The HTR3C gene encodes the 5-HT3 receptor subunit C, a ligand-gated ion channel component that modulates receptor properties in peripheral and central nervous system. This page covers the gene's structure, function, expression, disease associations, and therapeutic relevance.
| Gene Symbol | HTR3C |
| Chromosome | 3q27.1 |
| Function | Motility: Regulation of intestinal peristalsis and transit |
| Amino Acids | 441 aa |
| Pathways | Cholesterol, Immune Response |
| Ensembl ID | ENSG00000186090 |
| GeneCards | HTR3C |
| Human Protein Atlas | HTR3C |
| Associated Diseases | neurodegeneration |
| KG Connections | 48 knowledge graph edges |
| Databases | GeneCardsUniProtNCBI GeneHPASTRING |
Knowledge base pages for this entity
graph TD
HTR3C["<b>HTR3C</b>"]
Inflammation{"Inflammation"}
HTR3C -->|"biomarker for"| Inflammation
Als{"Als"}
HTR3C -->|"biomarker for"| Als
Atherosclerosis{"Atherosclerosis"}
HTR3C -->|"biomarker for"| Atherosclerosis
Ms{"Ms"}
HTR3C -->|"biomarker for"| Ms
Fibrosis{"Fibrosis"}
HTR3C -->|"biomarker for"| Fibrosis
ALS{"ALS"}
HTR3C -->|"biomarker for"| ALS
NTS["NTS"]
HTR3C -->|"biomarker for"| NTS
IL1A["IL1A"]
HTR3C -->|"biomarker for"| IL1A
LDLR["LDLR"]
HTR3C -->|"biomarker for"| LDLR
Cholesterol(["Cholesterol"])
HTR3C -->|"biomarker for"| Cholesterol
Immune_Response(["Immune Response"])
HTR3C -->|"biomarker for"| Immune_Response
IL13RA1["IL13RA1"]
HTR3C -->|"biomarker for"| IL13RA1
NR4A2["NR4A2"]
NR4A2 -->|"biomarker for"| HTR3C
CXCL2["CXCL2"]
CXCL2 -->|"biomarker for"| HTR3C
CSF2["CSF2"]
CSF2 -->|"biomarker for"| HTR3C
MSR1["MSR1"]
MSR1 -->|"biomarker for"| HTR3C
STAT3["STAT3"]
STAT3 -->|"biomarker for"| HTR3C
MMP9["MMP9"]
MMP9 -->|"biomarker for"| HTR3C
JAK1["JAK1"]
JAK1 -->|"biomarker for"| HTR3C
IL1A -->|"biomarker for"| HTR3C
LDLR -->|"biomarker for"| HTR3C
GENES["GENES"]
GENES -->|"biomarker for"| HTR3C
style HTR3C fill:#1a3a4a,stroke:#4fc3f7,stroke-width:3px,color:#e0e0e0| Target | Relation | Type | Str |
|---|---|---|---|
| Inflammation | biomarker_for | disease | 0.65 |
| Als | biomarker_for | disease | 0.65 |
| Atherosclerosis | biomarker_for | disease | 0.65 |
| Ms | biomarker_for | disease | 0.65 |
| Fibrosis | biomarker_for | disease | 0.65 |
| ALS | biomarker_for | disease | 0.65 |
| NTS | biomarker_for | gene | 0.60 |
| IL1A | biomarker_for | gene | 0.60 |
| LDLR | biomarker_for | gene | 0.60 |
| NR4A2 | biomarker_for | gene | 0.60 |
| CXCL2 | biomarker_for | gene | 0.60 |
| JAK1 | biomarker_for | gene | 0.60 |
| CSF2 | biomarker_for | gene | 0.60 |
| MMP9 | biomarker_for | gene | 0.60 |
| STAT3 | biomarker_for | gene | 0.60 |
| Cholesterol | biomarker_for | pathway | 0.60 |
| Immune Response | biomarker_for | pathway | 0.60 |
| IL13RA1 | biomarker_for | gene | 0.60 |
| MSR1 | biomarker_for | gene | 0.60 |
| GENES | biomarker_for | gene | 0.60 |
| INFLAMMATION | biomarker_for | gene | 0.60 |
| RNA | biomarker_for | gene | 0.60 |
| AND | biomarker_for | gene | 0.60 |
| CCR9 | biomarker_for | gene | 0.60 |
| TNFRSF19 | biomarker_for | gene | 0.60 |
| App | biomarker_for | protein | 0.60 |
| CXCL2 | associated_with | gene | 0.50 |
| NR4A2 | associated_with | gene | 0.50 |
| IL1A | associated_with | gene | 0.50 |
| MSR1 | associated_with | concept | 0.50 |
| Source | Relation | Type | Str |
|---|---|---|---|
| NR4A2 | biomarker_for | gene | 0.60 |
| CXCL2 | biomarker_for | gene | 0.60 |
| CSF2 | biomarker_for | gene | 0.60 |
| STAT3 | biomarker_for | gene | 0.60 |
| MMP9 | biomarker_for | gene | 0.60 |
| JAK1 | biomarker_for | gene | 0.60 |
| IL1A | biomarker_for | gene | 0.60 |
| LDLR | biomarker_for | gene | 0.60 |
| NTS | biomarker_for | gene | 0.60 |
| MSR1 | biomarker_for | gene | 0.60 |
| GENES | biomarker_for | gene | 0.60 |
| INFLAMMATION | biomarker_for | gene | 0.60 |
| IL13RA1 | biomarker_for | gene | 0.60 |
| TNFRSF19 | biomarker_for | gene | 0.60 |
| CCR9 | biomarker_for | gene | 0.60 |
| RNA | biomarker_for | gene | 0.60 |
| CSF2 | associated_with | gene | 0.50 |
| MMP9 | associated_with | gene | 0.50 |
Hypotheses where this entity is a therapeutic target
| Hypothesis | Score | Disease | Analysis |
|---|---|---|---|
| No targeting hypotheses | |||
Scientific analyses that reference this entity
No analyses mention this entity
Experimental studies targeting or related to this entity
| Experiment | Type | Disease | Score | Feasibility | Model | Status | Est. Cost |
|---|---|---|---|---|---|---|---|
| No experiments found | |||||||
Scientific publications cited in analyses involving this entity
| Title & PMID | Authors | Journal | Year | Citations |
|---|---|---|---|---|
| No papers found | ||||