Entity Detail — Knowledge Graph Node
This page aggregates everything SciDEX knows about KDM5A: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.
| Gene Symbol | KDM5A |
| Full Name | Lysine Specific Demethylase 5A |
| Aliases | Lysine Specific Demethylase 5A (JARID1A |
| Chromosome | 12p13.33 |
| Protein Family | JARID1 family (Jumonji C domain demethylase) |
| Function | This activity positions KDM5A as a transcriptional repressor that silences gene expression programs [[klose2006]](https://pubmed.ncbi.nlm.nih.gov/17110336/). |
| Pathways | Developmental Gene Regulation, Developmental Regulation |
| UniProt ID | Q9UMM3 |
| NCBI Gene ID | 8248 |
| Ensembl ID | ENSG00000150109 |
| OMIM | 180388 |
| GeneCards | KDM5A |
| Human Protein Atlas | KDM5A |
| Alias | JARID1A, RBP2, PLU1 |
| Associated Diseases | ALS, Aging, Diabetes, Ferroptosis |
| Interactions | PARP1, AND, NURD COMPLEX, CHD4 |
| KG Connections | 40 knowledge graph edges |
| Databases | GeneCardsHPASTRING |
Knowledge base pages for this entity
graph TD
KDM5A["<b>KDM5A</b>"]
TREM2["TREM2"]
KDM5A -->|"upregulates"| TREM2
HOXA5["HOXA5"]
KDM5A -->|"regulates"| HOXA5
Wnt___catenin_pathway(["Wnt/beta-catenin pathway"])
KDM5A -->|"activates"| Wnt___catenin_pathway
KDM5A -->|"inhibits"| Wnt___catenin_pathway
p53["p53"]
KDM5A -->|"regulates"| p53
WTAP["WTAP"]
KDM5A -->|"upregulates"| WTAP
PARP1["PARP1"]
KDM5A -->|"interacts with"| PARP1
Als{"Als"}
KDM5A -->|"regulates"| Als
ALS{"ALS"}
KDM5A -->|"regulates"| ALS
CHD4["CHD4"]
KDM5A -->|"regulates"| CHD4
GENES["GENES"]
KDM5A -->|"regulates"| GENES
AND["AND"]
KDM5A -->|"interacts with"| AND
microglia["microglia"]
microglia -->|"regulates"| KDM5A
CHD4 -->|"regulates"| KDM5A
GENES -->|"regulates"| KDM5A
style KDM5A fill:#1a3a4a,stroke:#4fc3f7,stroke-width:3px,color:#e0e0e0| Target | Relation | Type | Str |
|---|---|---|---|
| H3K4 Methylation | catalyzes | entity | 0.95 |
| NURD COMPLEX | interacts_with | protein | 0.95 |
| Developmental Regulation | involved_in | process | 0.90 |
| Transcriptional Activation | regulates | process | 0.85 |
| CHD4 | interacts_with | protein | 0.85 |
| Developmental Gene Regulation | involved_in | process | 0.85 |
| TREM2 | upregulates | gene | 0.80 |
| HOXA5 | regulates | gene | 0.80 |
| Wnt/β-catenin pathway | activates | pathway | 0.80 |
| Wnt/β-catenin pathway | inhibits | pathway | 0.80 |
| p53 | regulates | protein | 0.80 |
| PARP1 | interacts_with | protein | 0.80 |
| WTAP | upregulates | gene | 0.80 |
| Als | regulates | disease | 0.65 |
| ALS | regulates | disease | 0.65 |
| Ferroptosis | associated_with | disease | 0.65 |
| Aging | associated_with | disease | 0.65 |
| Diabetes | associated_with | disease | 0.65 |
| CHD4 | regulates | gene | 0.60 |
| TYRO3 | associated_with | gene | 0.60 |
| SREBF1 | associated_with | gene | 0.60 |
| CAMKK2 | associated_with | gene | 0.60 |
| CDKN1A | associated_with | gene | 0.60 |
| CTSB | associated_with | gene | 0.60 |
| ARNTL | associated_with | gene | 0.60 |
| Rb | regulates | protein | 0.60 |
| GENES | regulates | gene | 0.60 |
| AND | interacts_with | gene | 0.60 |
| COMPLEMENT | associated_with | gene | 0.60 |
| RNA | associated_with | gene | 0.60 |
| FERROPTOSIS | associated_with | gene | 0.60 |
| epigenetic regulation | participates_in | pathway | 0.60 |
| oxidative stress response | participates_in | pathway | 0.60 |
| ALS | associated_with | disease | 0.60 |
Hypotheses where this entity is a therapeutic target
| Hypothesis | Score | Disease | Analysis |
|---|---|---|---|
| No targeting hypotheses | |||
Scientific analyses that reference this entity
No analyses mention this entity
Scientific publications cited in analyses involving this entity
| Title & PMID | Authors | Journal | Year | Citations |
|---|---|---|---|---|
| No papers found | ||||