gene 1,050 words KG: KDM6B 2026-03-24
kind:genesection:genesstate:published
Contents

KDM6B (JMJD3)

🧬 Gene Info
Gene SymbolKDM6B
Full NameLysine Demethylase 6B
AliasesJMJD3
Chromosome17p13.1
Functionencodes a Jumonji C (JmjC) domain-containing histone demethylase that specifically removes di- and trimethyl marks from histone H3 lysine 27 (H3K27me2/3).
PathwaysNF-κB
UniProt ID[O15054](https://www.uniprot.org/uniprot/O15054)
Ensembl IDENSG00000132510
GeneCardsKDM6B
Human Protein AtlasKDM6B
Neuronal differentiationKDM6B removes H3K27me3 from neurogenic gene promoters during the transition from neural stem cells to postmitotic neurons, activating expression of NEUROD1, TBR1, and other neuronal identity genes
Macrophage polarizationKDM6B drives M1 (pro-inflammatory) macrophage/microglial polarization by activating inflammatory gene programs
Aging epigenomeKDM6B expression increases with aging, contributing to the progressive loss of H3K27me3 that characterizes the aging epigenome and potentially derepressing deleterious gene programs
Neuroinflammatory amplificationKDM6B removes H3K27me3 from pro-inflammatory gene promoters (TNF, IL1B, IL6, complement components), converting microglia to a chronic inflammatory state that damages neurons
[Tau](/proteins/tau) pathologyKDM6B activates kinase genes (CDK5, GSK3B) that hyperphosphorylate tau, promoting neurofibrillary tangle formation
Associated DiseasesNAFLD, NASH
Known Drugs/Compoundsrapamycin
InteractionsLC3, ATG7, RPTOR, PRKAA2, LAMP2, PLIN3
KG Connections219 knowledge graph edges
DatabasesGeneCardsNCBI GeneHPASTRING

Knowledge Graph

Related Hypotheses (21)

TREM2-mediated microglial tau clearance enhancement
Score: 0.49
Astrocyte-Mediated Neuronal Epigenetic Rescue
Score: 0.48
Cryptic Exon Silencing Restoration
Score: 0.46
Cross-Seeding Prevention Strategy
Score: 0.45
Glycine-Rich Domain Competitive Inhibition
Score: 0.43

Related Analyses (7)

TDP-43 phase separation therapeutics for ALS-FTD
neurodegeneration · archived
Lipid raft composition changes in synaptic neurodegeneration
neurodegeneration · completed
RNA binding protein dysregulation across ALS FTD and AD
neurodegeneration · archived
Synaptic pruning by microglia in early AD
neurodegeneration · archived
Epigenetic reprogramming in aging neurons
neurodegeneration · archived

Related Experiments (5)

Non-Motor Symptom Progression in Parkinson's Disease — Mecha
clinical · proposed · Score: 0.40
Mechanism: Progranulin Loss and TDP-43 Pathology in FTD
validation · proposed · Score: 0.40
TDP-43 PET Ligand Development for FTD and ALS
clinical · proposed · Score: 0.40
Microglial TREM2 Agonist In Vivo Efficacy
validation · proposed · Score: 0.40
TREM2 Function in Alzheimer's Disease — From Risk Variant to
validation · proposed · Score: 0.40

See Also (9)

CREB-independent Neuronal Survival Pathways
mechanism · KG edge: activates
Packard Center for ALS Research
institution · KG edge: activates
FOXO1 Gene
gene · KG edge: activates
FGF21 — Fibroblast Growth Factor 21
gene · KG edge: activates
C1QA Gene — Complement Component 1q A Chain
gene · KG edge: interacts_with

Knowledge Graph (12 edges)

KDM6B activates LC3
KDM6B activates ATG7
KDM6B interacts_with LC3
KDM6B interacts_with RPTOR
KDM6B interacts_with PRKAA2
KDM6B interacts_with LAMP2
KDM6B interacts_with PLIN3
KDM6B interacts_with BECN1
KDM6B interacts_with GRK2
KDM6B interacts_with FOXO1