Entity Detail — Knowledge Graph Node
This page aggregates everything SciDEX knows about CTSB: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.
CTSB is a gene implicated in neurodegeneration research. Key relationships include: associated with, activates, therapeutic target. Associated with ALS, Aging, Als. Connected to 311 entities in the SciDEX knowledge graph.
| Gene Symbol | CTSB |
| Full Name | Cathepsin B |
| Chromosome | 8p23.1 |
| Subcellular Localization | | Compartment | Function | |
| Molecular Weight | 26 kDa |
| Amino Acids | 339 aa |
| Exons | 13 |
| Pathways | Autophagy |
| UniProt ID | P07846 |
| NCBI Gene ID | 1508 |
| Ensembl ID | ENSG00000164733 |
| OMIM | 116810 |
| GeneCards | CTSB |
| Human Protein Atlas | CTSB |
| Encoded Protein | Cathepsin B |
| Associated Diseases | ALS, APOPTOSIS, Aging, Alzheimer, Amyotrophic Lateral Sclerosis |
| Known Drugs/Compounds | tannic acid, rapamycin |
| Interactions | C1QA, SPP1, GRN, CALCINEURIN, ATG12, ATG10 |
| KG Connections | 853 knowledge graph edges |
| Databases | GeneCardsHPASTRING |
Knowledge base pages for this entity
flowchart TD
TFEB["TFEB<br/>Transcription Factor"]
SLAMF7["SLAMF7<br/>Signaling Protein"]
CTSB["CTSB<br/>Cathepsin B<br/>Lysosomal Protease"]
ATG12["ATG12<br/>Autophagy Protein"]
TPP1["TPP1<br/>Lysosomal Enzyme"]
GRN["GRN<br/>Progranulin<br/>Growth Factor"]
Phagocytosis["Phagocytosis<br/>Pathway"]
Complement["Complement<br/>Pathway"]
C1QA["C1QA<br/>Complement<br/>Component"]
SPP1["SPP1<br/>Osteopontin<br/>Inflammatory Marker"]
Neurodegeneration["Neurodegeneration<br/>Pathological Process"]
Alzheimer["Alzheimer's<br/>Disease"]
Parkinson["Parkinson's<br/>Disease"]
ALS["Amyotrophic<br/>Lateral Sclerosis"]
Huntington["Huntington's<br/>Disease"]
TFEB --|"upregulates"|--> CTSB
SLAMF7 --|"activates"|--> CTSB
CTSB --|"activates"|--> ATG12
CTSB --|"associated_with"|--> TPP1
CTSB --|"activates"|--> GRN
CTSB --|"activates"|--> Phagocytosis
CTSB --|"activates"|--> Complement
CTSB --|"activates"|--> C1QA
CTSB --|"activates"|--> SPP1
CTSB --|"activates"|--> Neurodegeneration
CTSB --|"associated_with"|--> Alzheimer
CTSB --|"associated_with"|--> Parkinson
CTSB --|"associated_with"|--> ALS
CTSB --|"associated_with"|--> Huntington
style CTSB fill:#006494
style TFEB fill:#4a1a6b
style SLAMF7 fill:#4a1a6b
style ATG12 fill:#1b5e20
style TPP1 fill:#1b5e20
style GRN fill:#1b5e20
style Phagocytosis fill:#1b5e20
style Complement fill:#ef5350
style C1QA fill:#ef5350
style SPP1 fill:#ef5350
style Neurodegeneration fill:#5d4400
style Alzheimer fill:#5d4400
style Parkinson fill:#5d4400
style ALS fill:#5d4400
style Huntington fill:#5d4400| Target | Relation | Type | Str |
|---|---|---|---|
| ds-83b31ef18d49 | provides_data_for | dataset | 1.00 |
| hepato-cardiotoxicity | mediates | phenotype | 0.95 |
| Vandetanib-Induced Hepato-Cardiotoxicity | mediates | phenotype | 0.95 |
| MCOLN1 | degrades | gene | 0.90 |
| therapeutic_target | involved_in | process | 0.88 |
| MCOLN1 | interacts_with | gene | 0.80 |
| neural stem cells | activates | cell_type | 0.80 |
| Alzheimer | activates | disease | 0.75 |
| Als | activates | disease | 0.75 |
| Inflammation | activates | disease | 0.75 |
| LAMP1 | associated_with | gene | 0.70 |
| LC3 | associated_with | gene | 0.70 |
| P62 | associated_with | gene | 0.70 |
| GAPDH | interacts_with | gene | 0.70 |
| LAMP1 | interacts_with | gene | 0.70 |
| LGALS3 | interacts_with | gene | 0.70 |
| MAP1LC3B | interacts_with | gene | 0.70 |
| SQSTM1 | interacts_with | gene | 0.70 |
| TFEB | interacts_with | gene | 0.70 |
| ULK1 | activates | gene | 0.70 |
| CTSD | interacts_with | gene | 0.70 |
| LC3 | interacts_with | gene | 0.70 |
| ULK1 | interacts_with | gene | 0.70 |
| AMPK signaling | participates_in | pathway | 0.70 |
| Parkinson's disease | associated_with | disease | 0.70 |
| Autophagy | activates | pathway | 0.70 |
| oxidative stress response | participates_in | pathway | 0.70 |
| autophagy pathway | participates_in | pathway | 0.70 |
| APOPTOSIS | causes | phenotype | 0.70 |
| neural stem cells | interacts_with | cell_type | 0.70 |
| neurons | activates | cell_type | 0.70 |
| GFP | activates | gene | 0.70 |
| GFP | interacts_with | gene | 0.70 |
| UBIQUITIN | treats | protein | 0.65 |
| NLRP3 | regulates | gene | 0.65 |
| SNCA | causes | gene | 0.65 |
| SNCA | degrades | gene | 0.65 |
| Dementia | activates | disease | 0.65 |
| Amyotrophic Lateral Sclerosis | associated_with | disease | 0.65 |
| Neurodegeneration | activates | disease | 0.65 |
| Ataxia | associated_with | disease | 0.65 |
| Als | associated_with | disease | 0.65 |
| Parkinson | associated_with | disease | 0.65 |
| Huntington | associated_with | disease | 0.65 |
| Alzheimer | associated_with | disease | 0.65 |
| Ms | associated_with | disease | 0.65 |
| Ischemia | activates | disease | 0.65 |
| Neuroblastoma | associated_with | disease | 0.65 |
| Als | therapeutic_target | disease | 0.65 |
| Cancer | therapeutic_target | disease | 0.65 |
| Source | Relation | Type | Str |
|---|---|---|---|
| ds-83b31ef18d49 | data_in | dataset | 1.00 |
| Menin | regulates | protein | 0.95 |
| SPP1 | upregulates | gene | 0.90 |
| Vandetanib | upregulates | drug | 0.90 |
| tannic acid | binds | compound | 0.90 |
| STAT3 | upregulates | gene | 0.90 |
| TFEB | activates | gene | 0.85 |
| TFEB | upregulates | protein | 0.85 |
| SLAMF7 | activates | gene | 0.80 |
| AMPK | activates | gene | 0.80 |
| SQSTM1 | associated_with | gene | 0.70 |
| ALZHEIMER | activates | gene | 0.70 |
| INFLAMMATION | activates | gene | 0.70 |
| rapamycin | targets | drug | 0.70 |
| AMPK | interacts_with | gene | 0.70 |
| MACROPHAGE | produces | cell_type | 0.65 |
| STIP1 | associated_with | gene | 0.60 |
| LGALS3 | associated_with | gene | 0.60 |
| HSPA8 | associated_with | gene | 0.60 |
| MCOLN1 | associated_with | gene | 0.60 |
| SOD1 | associated_with | gene | 0.60 |
| BCL2 | associated_with | gene | 0.60 |
| ACTB | associated_with | gene | 0.60 |
| LAMP1 | associated_with | gene | 0.60 |
| MTOR | associated_with | gene | 0.60 |
| LC3 | associated_with | gene | 0.60 |
| TUBB3 | associated_with | gene | 0.60 |
| ATG7 | associated_with | gene | 0.60 |
| JUN | activates | gene | 0.60 |
| MAP2 | associated_with | gene | 0.60 |
| SYN1 | associated_with | gene | 0.60 |
| CTSD | associated_with | gene | 0.60 |
| MAP1LC3B | associated_with | gene | 0.60 |
| SNAP25 | associated_with | gene | 0.60 |
| SPP1 | activates | gene | 0.60 |
| C1QA | activates | gene | 0.60 |
| GRN | activates | gene | 0.60 |
| PPP3CB | associated_with | gene | 0.60 |
| TFEB | associated_with | gene | 0.60 |
| TARDBP | associated_with | gene | 0.60 |
| HSPB8 | associated_with | gene | 0.60 |
| P62 | associated_with | gene | 0.60 |
| LAMP2A | associated_with | gene | 0.60 |
| PPARGC1A | associated_with | gene | 0.60 |
| STUB1 | associated_with | gene | 0.60 |
| CALCINEURIN | activates | gene | 0.60 |
| BAG3 | associated_with | gene | 0.60 |
| BECN1 | associated_with | gene | 0.60 |
| ATG12 | activates | gene | 0.60 |
| GLA | associated_with | gene | 0.60 |
Hypotheses where this entity is a therapeutic target
| Hypothesis | Score | Disease | Analysis |
|---|---|---|---|
| No targeting hypotheses | |||
Scientific analyses that reference this entity
No analyses mention this entity
Scientific publications cited in analyses involving this entity
| Title & PMID | Authors | Journal | Year | Citations |
|---|---|---|---|---|
| No papers found | ||||