gene

XPF

Entity Detail — Knowledge Graph Node

Understanding Entity Pages

This page aggregates everything SciDEX knows about XPF: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.

42Connections
0Hypotheses
0Analyses
25Outgoing
17Incoming

Summary

ERCC4 (XPF) - a critical DNA repair endonuclease involved in nucleotide excision repair, with links to xeroderma pigmentosum and neurodegenerative diseases

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🧬 Gene Info
Gene SymbolERCC4 (formerly XPF)
AliasesERCC4 (XPF)
Chromosome16p13.12
FunctionThe complex recognizes and cleaves DNA at the 5' side of various DNA lesions, including
Primary Expressionall human tissues with particularly high levels in: - Testis: Highest expression (germ cell DNA repair) - Skin: High basal expression (UV expo
Molecular Weight~104 kDa
Amino Acids966 aa
UniProt IDQ92841
NCBI Gene ID2072
OMIM278760
Protein Length966 amino acids
ERCC1Heterodimer formation, substrate recognition
XPADamage verification, complex recruitment
XPCGlobal genome NER damage recognition
TFIIHTranscription-repair coupling
Associated DiseasesAlzheimer's disease, Parkinson's disease
InteractionsXRCC1, PNKP, XPG, TDP1, FEN1, SETX
KG Connections42 knowledge graph edges
DatabasesGeneCardsHPASTRING
🔮 Predicted Structure: XPF — AlphaFold Q92841 Click to expand

AI-predicted structure from AlphaFold | Powered by Mol*

Wiki Pages (21)

Knowledge base pages for this entity

Canonical Page

XPF Gene

gene · 1246 words

cbs-psp-daily-action-plan

therapeutic · 30834 words

Cockayne Syndrome

disease · 3181 words

GTF2H4 (General Transcription Factor IIH Subunit 4)

gene · 2548 words

GTF2H6

gene · 2048 words

FEN1 — Flap Endonuclease 1

gene · 2004 words

Pathway Diagram

graph TD
    XPF["<b>XPF</b>"]
    Cancer{"Cancer"}
    XPF -->|"activates"| Cancer
    Als{"Als"}
    XPF -->|"activates"| Als
    ALS{"ALS"}
    XPF -->|"activates"| ALS
    XRCC1["XRCC1"]
    XPF -->|"activates"| XRCC1
    PNKP["PNKP"]
    XPF -->|"activates"| PNKP
    XPG["XPG"]
    XPF -->|"inhibits"| XPG
    TDP1["TDP1"]
    XPF -->|"inhibits"| TDP1
    FEN1["FEN1"]
    XPF -->|"inhibits"| FEN1
    DNA["DNA"]
    XPF -->|"inhibits"| DNA
    SETX["SETX"]
    XPF -->|"activates"| SETX
    NEURODEGENERATIVE_DISEASES["NEURODEGENERATIVE DISEASES"]
    XPF -->|"activates"| NEURODEGENERATIVE_DISEASES
    CANCER["CANCER"]
    XPF -->|"activates"| CANCER
    XPG -->|"inhibits"| XPF
    SETX -->|"activates"| XPF
    TDP1 -->|"inhibits"| XPF
    PNKP -->|"activates"| XPF
    FEN1 -->|"inhibits"| XPF
    DNA -->|"inhibits"| XPF
    AND["AND"]
    AND -->|"inhibits"| XPF
    NEURODEGENERATIVE_DISORDERS["NEURODEGENERATIVE DISORDERS"]
    NEURODEGENERATIVE_DISORDERS -->|"activates"| XPF
    NEURODEGENERATIVE_DISEASES -->|"activates"| XPF
    style XPF fill:#1a3a4a,stroke:#4fc3f7,stroke-width:3px,color:#e0e0e0

Outgoing (25)

TargetRelationTypeStr
Canceractivatesdisease0.65
Alsactivatesdisease0.65
ALSactivatesdisease0.65
Cancerencodesdisease0.65
Alsencodesdisease0.65

Incoming (17)

SourceRelationTypeStr
XPGinhibitsgene0.60
SETXactivatesgene0.60
TDP1inhibitsgene0.60
PNKPactivatesgene0.60
FEN1inhibitsgene0.60

Targeting Hypotheses (0)

Hypotheses where this entity is a therapeutic target

HypothesisScoreDiseaseAnalysis
No targeting hypotheses

Mentioning Analyses (0)

Scientific analyses that reference this entity

No analyses mention this entity

Related Papers (0)

Scientific publications cited in analyses involving this entity

Title & PMIDAuthorsJournalYearCitations
No papers found