gene

TDP1

Entity Detail — Knowledge Graph Node

Understanding Entity Pages

This page aggregates everything SciDEX knows about TDP1: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.

43Connections
0Hypotheses
0Analyses
33Outgoing
10Incoming

Summary

TDP1 is a gene implicated in neurodegeneration research. Key relationships include: therapeutic target, activates, inhibits. Associated with ALS, Als, Cancer. Connected to 33 entities in the SciDEX knowledge graph.

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🧬 Gene Info
Gene SymbolTDP1
Full NameTyrosyl-DNA Phosphodiesterase 1
Chromosome14q32.12
FunctionThe TDP1 gene encodes Tyrosyl-DNA Phosphodiesterase 1, involved in DNA repair and genomic stability
UniProt IDQ9NZJ8
NCBI Gene ID70099
Ensembl IDENSG00000124564
OMIM605197
GeneCardsTDP1
Human Protein AtlasTDP1
Associated Diseasesneurodegeneration
InteractionsPNKP, FEN1, XPF, XRCC1, SETX, HIF1A
KG Connections43 knowledge graph edges
DatabasesGeneCardsHPASTRING
🔮 Predicted Structure: TDP1 — AlphaFold Q9NZJ8 Click to expand

AI-predicted structure from AlphaFold | Powered by Mol*

Wiki Pages (19)

Knowledge base pages for this entity

Canonical Page

TDP1 Gene

gene · 626 words

dna-damage-repair

mechanism · 3555 words

FEN1 — Flap Endonuclease 1

gene · 2004 words

ERCC5 (XPG) Gene — Excision Repair Cross-Complementation Group 5

gene · 1930 words

TYDP1 — Tyrosyl-DNA Phosphodiesterase 1

gene · 1793 words

TDP2 — Tyrosyl-DNA Phosphodiesterase 2

gene · 1505 words

Pathway Diagram

graph TD
    TDP1["<b>TDP1</b>"]
    Cancer{"Cancer"}
    TDP1 -->|"activates"| Cancer
    Als{"Als"}
    TDP1 -->|"activates"| Als
    TDP1 -->|"therapeutic target"| Cancer
    TDP1 -->|"therapeutic target"| Als
    ALS{"ALS"}
    TDP1 -->|"activates"| ALS
    PNKP["PNKP"]
    TDP1 -->|"activates"| PNKP
    FEN1["FEN1"]
    TDP1 -->|"inhibits"| FEN1
    XPF["XPF"]
    TDP1 -->|"inhibits"| XPF
    XRCC1["XRCC1"]
    TDP1 -->|"activates"| XRCC1
    DNA["DNA"]
    TDP1 -->|"inhibits"| DNA
    SETX["SETX"]
    TDP1 -->|"activates"| SETX
    MAPK1["MAPK1"]
    TDP1 -->|"therapeutic target"| MAPK1
    XPG["XPG"]
    XPG -->|"inhibits"| TDP1
    SETX -->|"activates"| TDP1
    XPF -->|"inhibits"| TDP1
    PNKP -->|"activates"| TDP1
    NFKB1["NFKB1"]
    NFKB1 -->|"therapeutic target"| TDP1
    ERK["ERK"]
    ERK -->|"therapeutic target"| TDP1
    TRIM24["TRIM24"]
    TRIM24 -->|"therapeutic target"| TDP1
    FEN1 -->|"inhibits"| TDP1
    DNA -->|"inhibits"| TDP1
    AND["AND"]
    AND -->|"activates"| TDP1
    style TDP1 fill:#1a3a4a,stroke:#4fc3f7,stroke-width:3px,color:#e0e0e0

Outgoing (33)

TargetRelationTypeStr
TOP1degradesprotein0.90
Single-Strand Breaksassociated_withprocess0.85
Canceractivatesdisease0.65
Alsactivatesdisease0.65
Cancertherapeutic_targetdisease0.65

Incoming (10)

SourceRelationTypeStr
XPGinhibitsgene0.60
SETXactivatesgene0.60
XPFinhibitsgene0.60
PNKPactivatesgene0.60
NFKB1therapeutic_targetgene0.60

Targeting Hypotheses (0)

Hypotheses where this entity is a therapeutic target

HypothesisScoreDiseaseAnalysis
No targeting hypotheses

Mentioning Analyses (0)

Scientific analyses that reference this entity

No analyses mention this entity

Related Papers (0)

Scientific publications cited in analyses involving this entity

Title & PMIDAuthorsJournalYearCitations
No papers found