Entity Detail — Knowledge Graph Node
This page aggregates everything SciDEX knows about TDP1: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.
TDP1 is a gene implicated in neurodegeneration research. Key relationships include: therapeutic target, activates, inhibits. Associated with ALS, Als, Cancer. Connected to 33 entities in the SciDEX knowledge graph.
| Gene Symbol | TDP1 |
| Full Name | Tyrosyl-DNA Phosphodiesterase 1 |
| Chromosome | 14q32.12 |
| Function | The TDP1 gene encodes Tyrosyl-DNA Phosphodiesterase 1, involved in DNA repair and genomic stability |
| UniProt ID | Q9NZJ8 |
| NCBI Gene ID | 70099 |
| Ensembl ID | ENSG00000124564 |
| OMIM | 605197 |
| GeneCards | TDP1 |
| Human Protein Atlas | TDP1 |
| Associated Diseases | neurodegeneration |
| Interactions | PNKP, FEN1, XPF, XRCC1, SETX, HIF1A |
| KG Connections | 43 knowledge graph edges |
| Databases | GeneCardsHPASTRING |
Knowledge base pages for this entity
graph TD
TDP1["<b>TDP1</b>"]
Cancer{"Cancer"}
TDP1 -->|"activates"| Cancer
Als{"Als"}
TDP1 -->|"activates"| Als
TDP1 -->|"therapeutic target"| Cancer
TDP1 -->|"therapeutic target"| Als
ALS{"ALS"}
TDP1 -->|"activates"| ALS
PNKP["PNKP"]
TDP1 -->|"activates"| PNKP
FEN1["FEN1"]
TDP1 -->|"inhibits"| FEN1
XPF["XPF"]
TDP1 -->|"inhibits"| XPF
XRCC1["XRCC1"]
TDP1 -->|"activates"| XRCC1
DNA["DNA"]
TDP1 -->|"inhibits"| DNA
SETX["SETX"]
TDP1 -->|"activates"| SETX
MAPK1["MAPK1"]
TDP1 -->|"therapeutic target"| MAPK1
XPG["XPG"]
XPG -->|"inhibits"| TDP1
SETX -->|"activates"| TDP1
XPF -->|"inhibits"| TDP1
PNKP -->|"activates"| TDP1
NFKB1["NFKB1"]
NFKB1 -->|"therapeutic target"| TDP1
ERK["ERK"]
ERK -->|"therapeutic target"| TDP1
TRIM24["TRIM24"]
TRIM24 -->|"therapeutic target"| TDP1
FEN1 -->|"inhibits"| TDP1
DNA -->|"inhibits"| TDP1
AND["AND"]
AND -->|"activates"| TDP1
style TDP1 fill:#1a3a4a,stroke:#4fc3f7,stroke-width:3px,color:#e0e0e0| Target | Relation | Type | Str |
|---|---|---|---|
| TOP1 | degrades | protein | 0.90 |
| Single-Strand Breaks | associated_with | process | 0.85 |
| Cancer | activates | disease | 0.65 |
| Als | activates | disease | 0.65 |
| Cancer | therapeutic_target | disease | 0.65 |
| Als | therapeutic_target | disease | 0.65 |
| ALS | activates | disease | 0.65 |
| Cancer | encodes | disease | 0.65 |
| Als | encodes | disease | 0.65 |
| PNKP | activates | gene | 0.60 |
| FEN1 | inhibits | gene | 0.60 |
| XPF | inhibits | gene | 0.60 |
| XRCC1 | activates | gene | 0.60 |
| SETX | activates | gene | 0.60 |
| MAPK1 | therapeutic_target | gene | 0.60 |
| CTSD | therapeutic_target | gene | 0.60 |
| HIF1A | interacts_with | gene | 0.60 |
| XPG | inhibits | gene | 0.60 |
| Rb | inhibits | protein | 0.60 |
| DNA | inhibits | gene | 0.60 |
| GENES | therapeutic_target | gene | 0.60 |
| Wnt | therapeutic_target | pathway | 0.60 |
| Nf-Κb | therapeutic_target | pathway | 0.60 |
| Mapk | therapeutic_target | pathway | 0.60 |
| NEURODEGENERATIVE DISEASES | activates | gene | 0.60 |
| CANCER | activates | gene | 0.60 |
| NEURODEGENERATIVE DISORDERS | activates | gene | 0.60 |
| AND | activates | gene | 0.60 |
| Neuron | activates | cell_type | 0.60 |
| Neuron | encodes | cell_type | 0.60 |
| Ras | activates | protein | 0.60 |
| App | activates | protein | 0.60 |
| Neuron | expressed_in | cell_type | 0.55 |
Hypotheses where this entity is a therapeutic target
| Hypothesis | Score | Disease | Analysis |
|---|---|---|---|
| No targeting hypotheses | |||
Scientific analyses that reference this entity
No analyses mention this entity
Scientific publications cited in analyses involving this entity
| Title & PMID | Authors | Journal | Year | Citations |
|---|---|---|---|---|
| No papers found | ||||