Entity Detail — Knowledge Graph Node
This page aggregates everything SciDEX knows about rapamycin: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.
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| Name | rapamycin |
| Summary | Clinical trial evaluating rapamycin (sirolimus) as a disease-modifying treatment for ALS through mTOR inhibition and autophagy enhancement |
| Key Genes/Proteins | MTOR, mTOR, ATG, MAP1LC3B, SQSTM1, MTORC1 |
| Related Diseases | seizures |
| Related Pathways | autophagy |
Knowledge base pages for this entity
graph TD
rapamycin["rapamycin"] -.->|"inhibits"| MTOR["MTOR"]
style MTOR fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
rapamycin["rapamycin"] -->|"treats"| seizures["seizures"]
style seizures fill:#1a2a3a,stroke:#ffd54f,stroke-width:1px,color:#fff
rapamycin["rapamycin"] -->|"activates"| autophagy["autophagy"]
style autophagy fill:#1a2a3a,stroke:#81c784,stroke-width:1px,color:#fff
rapamycin["rapamycin"] -->|"prevents"| aging["aging"]
style aging fill:#1a2a3a,stroke:#ffd54f,stroke-width:1px,color:#fff
rapamycin["rapamycin"] -->|"activates"| MTORC1["MTORC1"]
style MTORC1 fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
rapamycin["rapamycin"] -->|"activates"| MAP1LC3B["MAP1LC3B"]
style MAP1LC3B fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
rapamycin["rapamycin"] -->|"activates"| ATG["ATG"]
style ATG fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
style rapamycin fill:#1b5e20,stroke:#4fc3f7,stroke-width:2px,color:#e0e0e0,font-weight:bold| Target | Relation | Type | Str |
|---|---|---|---|
| MTOR | inhibits | gene | 0.92 |
| mTOR | inhibits | protein | 0.90 |
| seizures | treats | phenotype | 0.90 |
| autophagy | activates | pathway | 0.90 |
| aging | prevents | process | 0.90 |
| ATG | targets | gene | 0.90 |
| MAP1LC3B | targets | gene | 0.90 |
| MTOR | targets | gene | 0.90 |
| SQSTM1 | targets | gene | 0.90 |
| MTORC1 | targets | gene | 0.90 |
| LAMP1 | targets | gene | 0.90 |
| RAS | targets | gene | 0.90 |
| PI3K | targets | gene | 0.90 |
| AKT | targets | gene | 0.90 |
| GABA | targets | gene | 0.90 |
| GABARAP | targets | gene | 0.90 |
| TFEB | targets | gene | 0.90 |
| LC3 | targets | gene | 0.90 |
| GAPDH | targets | gene | 0.90 |
| BECN1 | targets | gene | 0.90 |
| RNA | targets | gene | 0.90 |
| ULK1 | targets | gene | 0.90 |
| MAP1LC3 | targets | gene | 0.90 |
| AMPK | targets | gene | 0.90 |
| autophagy | upregulates | process | 0.90 |
| autophagy pathway | modulates | pathway | 0.85 |
| PARKIN | activates | gene | 0.80 |
| ACTB | targets | gene | 0.80 |
| RAB7A | targets | gene | 0.80 |
| CTSD | targets | gene | 0.80 |
| PIK3C3 | targets | gene | 0.80 |
| NLR | targets | gene | 0.80 |
| DNA | targets | gene | 0.80 |
| STING1 | targets | gene | 0.80 |
| RB1 | targets | gene | 0.80 |
| RB1CC1 | targets | gene | 0.80 |
| ROS | targets | gene | 0.80 |
| ALS | targets | gene | 0.80 |
| VAMP8 | targets | gene | 0.80 |
| CREB | targets | gene | 0.80 |
| STX17 | targets | gene | 0.80 |
| RUBCNL | targets | gene | 0.80 |
| LAMP2 | targets | gene | 0.80 |
| ATG7 | targets | gene | 0.80 |
| GFP | targets | gene | 0.80 |
| Alzheimer's Disease | treats | disease | 0.75 |
| MTORC1 | inhibits | protein | 0.72 |
| stroke | treats | disease | 0.70 |
| RUBCN | targets | gene | 0.70 |
| ATP | targets | gene | 0.70 |
| Source | Relation | Type | Str |
|---|---|---|---|
| LAMP1 | activates | gene | 0.95 |
| PI3K | activates | gene | 0.95 |
| AKT | activates | gene | 0.95 |
| BECN1 | activates | gene | 0.95 |
| AMPK | activates | gene | 0.95 |
| LC3 | activates | gene | 0.95 |
| P62 | activates | gene | 0.95 |
| MTOR | therapeutic_target | gene | 0.95 |
| MTOR | regulates | gene | 0.95 |
| AUTOPHAGY | regulates | process | 0.95 |
| GAPDH | activates | gene | 0.80 |
| APOPTOSIS | activates | process | 0.80 |
| CTSD | activates | gene | 0.65 |
| MYC | activates | gene | 0.65 |
| MICRORNA REGULATION | activates | process | 0.65 |
| ALS | activates | disease | 0.65 |
| BCL2 | activates | gene | 0.65 |
| CREB | activates | gene | 0.65 |
| P53 | activates | gene | 0.65 |
| LAMP2 | activates | gene | 0.65 |
| CANCER | activates | disease | 0.65 |
| MTOR | interacts_with | gene | 0.65 |
| MTOR | implicated_in | gene | 0.65 |
| ATP | regulates | gene | 0.65 |
| ISCHEMIA | regulates | disease | 0.65 |
| LAMP1 | regulates | gene | 0.65 |
| NADH | regulates | gene | 0.65 |
| AKT | targets | gene | 0.65 |
| MLKL | targets | gene | 0.65 |
| OPTN | phosphorylates | gene | 0.65 |
| PI3K | phosphorylates | gene | 0.65 |
| ALS | interacts_with | disease | 0.65 |
| AMYOTROPHIC LATERAL SCLEROSIS | interacts_with | disease | 0.65 |
| HUNTINGTON | interacts_with | disease | 0.65 |
| LAMP1 | interacts_with | gene | 0.65 |
| MTOR | targets | gene | 0.65 |
| PARKIN | targets | gene | 0.65 |
| PARKINSON | targets | disease | 0.65 |
| CREB | interacts_with | gene | 0.65 |
| LC3 | targets | gene | 0.65 |
| OPTN | targets | gene | 0.65 |
| P62 | regulates | gene | 0.65 |
| LC3 | regulates | gene | 0.65 |
| DEMENTIA | interacts_with | disease | 0.65 |
| FRONTOTEMPORAL DEMENTIA | interacts_with | disease | 0.65 |
| FTD | interacts_with | disease | 0.65 |
| NEURON | interacts_with | cell_type | 0.65 |
| PINK1 | causes | gene | 0.65 |
| ALZHEIMER | expressed_in | disease | 0.65 |
| ATG7 | expressed_in | gene | 0.65 |
Hypotheses where this entity is a therapeutic target
| Hypothesis | Score | Disease | Analysis |
|---|---|---|---|
| No targeting hypotheses | |||
Scientific analyses that reference this entity
No analyses mention this entity
Scientific publications cited in analyses involving this entity
| Title & PMID | Authors | Journal | Year | Citations |
|---|---|---|---|---|
| No papers found | ||||