How does SPI1 transcriptionally regulate C1QA and C1QC expression in atherosclerotic contexts?

PARTIALLY ADDRESSED

The authors identify SPI1 as a potential transcription factor regulating the hub genes but provide no mechanistic details of this regulatory relationship. Given SPI1's role in microglial activation and neuroinflammation, this regulatory circuit may be relevant to cerebrovascular disease and neurodegeneration. Gap type: unexplained_observation Source paper: An integrative analysis of single-cell and bulk transcriptome and bidirectional mendelian randomization analysis identified C1Q as a novel stimulated risk gene for Atherosclerosis. (2023, Front Immunol, PMID:38179058)

Priority: 0.75 Domain: neuroinflammation Hypotheses: 0
📊 Landscape Analysis

Landscape Summary: How does SPI1 transcriptionally regulate C1QA and C1QC expression in atherosclerotic contexts? is a 0.75 priority gap in neuroinflammation. It has 0 linked hypotheses with average composite score 0.000. Status: partially_addressed.

Key Unanswered Questions

Key Researchers

Colonna, Sevlever, et al. (TREM2 biology)

Clinical Trials

How does SPI1 transcriptionally regulate C1QA and C1QC expression in atherosclerotic contexts? — INVOKE-2 (completed)

📈 Living Dashboards
0
Hypotheses
0.000
Top Score
0.000
Avg Score
0
Debates
0.00
Avg Quality
60%
Resolution
0
Mechanistic Families
Gap Resolution Progress60%

Hypothesis Score Distribution

🏆 Competing Hypotheses (Ranked by Score)

No hypotheses linked to this gap yet.

🌊 Knowledge Graph Connections

activates (4)

C1QAcomplement cascadeC1QCcomplement cascadeSPI1PI3K/AKT/MTOR Signaling PathwayC1QAComplement Cascade

associated with (9)

C1QAcomplement_cascadeC1QCATHEROSCLEROSISC1QAATHEROSCLEROSISC1QAsynapsesC1QAAtherosclerosis
▸ Show 4 more

biomarker for (5)

C1QCAlzheimer's DiseaseC1QAAlzheimer'S DiseaseC1QAAtherosclerosisC1QCAtherosclerotic PlaquesC1QAAtherosclerotic Plaques

causes (1)

C1QAsynaptic pruning

correlates with (1)

C1QCCognitive Performance

data in (4)

SPI1benchmark_ot_ad_answer_key:SPI1benchmark_ot_ad_answer_key:SPI1SPI1ds-db4a006ea647SPI1ds-83b31ef18d49SPI1

encodes (1)

SPI1PU.1

expressed in (1)

SPI1Microglia

inhibits (1)

C1QAA1 astrocyte

involved in (2)

C1QCHallmark_ComplementC1QAHallmark_Complement

mediates (1)

C1QAMicroglial Synaptic Elimination

pathway partner (1)

C4BC1QA

provides data for (2)

SPI1ds-83b31ef18d49SPI1ds-db4a006ea647

regulates (6)

SPI1Microglial/Macrophage Inflammatory ResponseSPI1NeuroinflammationSPI1APOESPI1C1QASPI1C1QC
▸ Show 1 more

relates to (1)

h-immunity-c3bc272fC1QA

targets (5)

h-5a55aabcC1QAh-1fe4ba9bC1QAh-494861d2C1QAh-a8165b3bC1QAh-f19b8ac8C1QA

targets gene (1)

h-seaad-5b3cb8eaC1QA

upregulates (4)

SPP1C1QASPI1AutophagySPI1PhagocytosisSPI1Glycolysis
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