gene

SLC6A1

Entity Detail — Knowledge Graph Node

Understanding Entity Pages

This page aggregates everything SciDEX knows about SLC6A1: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.

36Connections
0Hypotheses
0Analyses
16Outgoing
20Incoming

Summary

GABA transporter 1 (GAT1) encoding gene critical for inhibitory neurotransmission and implicated in epilepsy, AD, and PD

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🧬 Gene Info
Gene SymbolSLC6A1
Chromosome3p25.3
Protein TypeGene
Functioninhibitory neurotransmission and implicated in epilepsy
Primary ExpressionBrain (neurons and astrocytes), peripheral tissues at low levels
Molecular Weight67 kDa
Amino Acids599 aa
Exons16
UniProt IDP30531
OMIM137165
GeneCardsSLC6A1
Human Protein AtlasSLC6A1
Genomic Coordinateschr3:11,000,000-11,200,000 (GRCh38)
Gene Length~65 kb
Number of Exons16 coding exons
Associated DiseasesAlzheimer
InteractionsGJA1, LRRK2, TXN, CALM1, LPL, Rb
KG Connections36 knowledge graph edges
DatabasesGeneCardsNCBI GeneHPASTRING
🔮 Predicted Structure: SLC6A1 — AlphaFold P30531 Click to expand

AI-predicted structure from AlphaFold | Powered by Mol*

Wiki Pages (21)

Knowledge base pages for this entity

Canonical Page

SLC6A1

gene · 963 words

AAV Gene Therapy for Neurodevelopmental Epilepsy — Competitive Landscape & Delivery Alternatives

therapeutic · 15567 words

gabaergic-dysfunction

mechanism · 4621 words

SLC6A12 Gene

gene · 2345 words

SLC6A11 Gene

gene · 2112 words

Substantia Nigra Pars Reticulata GABA Output Neurons

cell · 1832 words

Pathway Diagram

flowchart TD
    N0["SLC6A1"]
    N1["Alzheimer"]
    N0 -->|"expressed in"| N1
    N2["Diabetes"]
    N0 -->|"expressed in"| N2
    N3["GJA1"]
    N0 -->|"interacts with"| N3
    N4["LRRK2"]
    N0 -->|"interacts with"| N4
    N5["TXN"]
    N0 -->|"interacts with"| N5
    N6["DIABETES MELLITUS"]
    N0 -->|"expressed in"| N6
    N7["Synaptic Vesicle"]
    N0 -->|"expressed in"| N7
    N8["LPL"]
    N0 -->|"interacts with"| N8
    N9["Rb"]
    N0 -->|"interacts with"| N9
    N10["ALZHEIMER"]
    N10 -->|"expressed in"| N0
    N8 -->|"interacts with"| N0
    N11["CALM1"]
    N11 -->|"interacts with"| N0
    N3 -->|"interacts with"| N0
    N12["GENES"]
    N12 -->|"interacts with"| N0

    classDef gene fill:#1a3a2a,stroke:#4caf50,color:#e0e0e0
    classDef protein fill:#1a2a3a,stroke:#4fc3f7,color:#e0e0e0
    classDef disease fill:#3a1a1a,stroke:#ef5350,color:#e0e0e0
    classDef pathway fill:#2a1a3a,stroke:#ce93d8,color:#e0e0e0
    classDef mechanism fill:#2a2a1a,stroke:#ffd54f,color:#e0e0e0
    class N1 disease
    class N2 disease
    class N3 gene
    class N4 gene
    class N5 gene
    class N6 gene
    class N7 pathway
    class N8 gene
    class N9 protein
    class N10 gene
    class N11 gene
    class N12 gene

Outgoing (16)

TargetRelationTypeStr
Alzheimerexpressed_indisease0.65
Diabetesexpressed_indisease0.65
GJA1interacts_withgene0.60
LRRK2interacts_withgene0.60
TXNinteracts_withgene0.60

Incoming (20)

SourceRelationTypeStr
LPLinteracts_withgene0.60
CALM1interacts_withgene0.60
GJA1interacts_withgene0.60
LRRK2interacts_withgene0.60
TXNinteracts_withgene0.60

Targeting Hypotheses (0)

Hypotheses where this entity is a therapeutic target

HypothesisScoreDiseaseAnalysis
No targeting hypotheses

Mentioning Analyses (0)

Scientific analyses that reference this entity

No analyses mention this entity

Related Papers (0)

Scientific publications cited in analyses involving this entity

Title & PMIDAuthorsJournalYearCitations
No papers found