gene 984 words KG: SETX 2026-03-24
kind:genesection:genesstate:published
Contents

SETX Gene

🧬 Gene Info
Gene SymbolSETX
Full NameSenataxin
AliasesSETX gene
Chromosome9q34.13
Protein TypeEnzyme
Target ClassEnzyme
FunctionThe SETX gene encodes a protein belonging to the superfamily 1 helicases with both ATP-dependent DNA and RNA helicase activity[@suraweera2009].
Mechanism of ActionTherapeutic agents targeting SETX would likely enhance RNA helicase activity or stabilize protein function to improve transcriptional regulation and DNA repair, or alternatively inhibit aberrant signaling pathways triggered by SETX dysfunction in neuronal tissues. Small molecule stabilizers or gene therapy approaches could restore deficient helicase activity in ataxia-causing mutations.
Primary ExpressionBrain, Spinal cord, Testis, Liver
DruggabilityLow (0.28)
Clinical StageApproved
Molecular Weight303 kDa
Amino Acids2678 aa
PathwaysAutophagy, Dna Damage Response, Haploinsufficiency, Rna/Dna Helicase Activity
UniProt IDQ9UH73
NCBI Gene ID23067
Ensembl IDENSG00000112297
OMIM604465
GeneCardsSETX
Human Protein AtlasSETX
Associated DiseasesALS, ALS4, AOA2, Amyotrophic Lateral Sclerosis
Known Drugs/CompoundsRna, Dna, R-loop, siRNA, Sirna, rapamycin
InteractionsTDP1, PNKP, FEN1, XPF, XRCC1, ALS4
SciDEX TargetView Target Profile (2 clinical trials)
SciDEX HypothesesR-Loop Resolution Enhancement Therapy
KG Connections412 knowledge graph edges
DatabasesGeneCardsHPASTRING

Knowledge Graph

Related Hypotheses (14)

R-Loop Resolution Enhancement Therapy
Score: 0.43
CYP46A1 Overexpression Gene Therapy
Score: 0.63
Phase-Separated Organelle Targeting
Score: 0.52
RNA Granule Nucleation Site Modulation
Score: 0.48
Astrocytic Lipoxin A4 Pathway Restoration via ALOX15 Gene Th
Score: 0.45

Related Analyses (7)

RNA binding protein dysregulation across ALS FTD and AD
neurodegeneration · archived
TDP-43 phase separation therapeutics for ALS-FTD
neurodegeneration · archived
Microglia-astrocyte crosstalk amplification loops in neurode
neurodegeneration · archived
Neuroinflammation resolution mechanisms and pro-resolving me
neurodegeneration · archived
Lipid raft composition changes in synaptic neurodegeneration
neurodegeneration · completed

Related Experiments (6)

s:** - Single-cell RNA-seq to measure editing efficiency acr
falsification · proposed · Score: 0.40
ALS Progression Rate Heterogeneity — mechanism and biomarker
clinical · proposed · Score: 0.40
ALS Regional Onset and Spread: Network-Level Staging Model
clinical · proposed · Score: 0.40
Environmental Exposure Causal Attribution in ALS — Experimen
validation · proposed · Score: 0.40
s:** - Temporal analysis showing mitochondrial defects prece
falsification · proposed · Score: 0.40

See Also (6)

Packard Center for ALS Research
institution · KG edge: associated_with
ATM Gene
gene · KG edge: associated_with
ATG7 Gene
gene · KG edge: activates
Gene Page: ALS4 (SENATAXIN)
gene · KG edge: activates
ACTB Gene
gene · KG edge: associated_with

Knowledge Graph (12 edges)

SETX activates SMN1
SETX activates SQSTM1
SETX activates TFEB
SETX activates ULK1
SETX activates WIPI2
SETX associated_with neurodegeneration
SETX co_discussed TARDBP
SETX co_discussed HNRNPA2B1
SETX co_discussed NPM1
SETX co_discussed SYNCRIP