protein 2,127 words KG: TARDBP
Contents

TARDBP Protein (TDP-43)

🔬 Protein Info
Gene SymbolTARDBP
Chromosome1p36
Protein TypeTranscription Factor
Target ClassTranscription Factor
FunctionRNA-binding and transcription regulation, challenging for small molecule targeting
Mechanism of ActionRNA-binding and transcription regulation, challenging for small molecule targeting
Subcellular Localization</b></td><td>Nucleus (healthy), Cytoplasm (disease)</td></tr>
DruggabilityLow (0.43)
Clinical StagePhase III
Molecular Weight43 kDa
Amino Acids4477 aa
PathwaysApoptosis, Autophagy, Immune Response, Oxidative Stress, Tdp-43
UniProt IDA0A087WYY0
GeneCardsTARDBP
Human Protein AtlasTARDBP
Associated DiseasesAD, ALI, ALS, ALS-FTD, Alzheimer
Known Drugs/CompoundsTranscribed Rnas, RAPAMYCIN, rapamycin
InteractionsNTN1, SNRNP70, NTN3, ATG10, PINK1, LC3
SciDEX TargetView Target Profile (7 clinical trials)
SciDEX HypothesesCryptic Exon Silencing Restoration
Cross-Seeding Prevention Strategy
Glycine-Rich Domain Competitive Inhibition (+1 more)
KG Connections1201 knowledge graph edges
DatabasesGeneCardsNCBI GeneHPASTRING

Knowledge Graph

Related Hypotheses (30)

Microglial AIM2 Inflammasome as the Primary Driver of TDP-43
Score: 0.60
Multiplexed Base Editing for Simultaneous Neuroprotective Ge
Score: 0.53
Acid-Degradable LNP-Mediated Prenatal CRISPR Intervention fo
Score: 0.47
Cryptic Exon Silencing Restoration
Score: 0.46
Cross-Seeding Prevention Strategy
Score: 0.45

Related Analyses (14)

Protein aggregation cross-seeding across neurodegenerative d
neurodegeneration · archived
4R-tau strain-specific spreading patterns in PSP vs CBD
neurodegeneration · archived
APOE4 structural biology and therapeutic targeting strategie
neurodegeneration · archived
Autophagy-lysosome pathway convergence across neurodegenerat
neurodegeneration · archived
Synaptic pruning by microglia in early AD
neurodegeneration · archived

Related Experiments (15)

TDP-43 mutant mouse model cGAS/STING pathway analysis
validation · proposed · Score: 0.90
TDP-43 mitochondrial invasion and DNA release via mPTP
exploratory · proposed · Score: 0.90
TDP-43 mitochondrial invasion and mtDNA release in iPSC moto
exploratory · proposed · Score: 0.90
cGAS/STING pathway validation in TDP-43 mutant mice
validation · proposed · Score: 0.85
cGAMP biomarker analysis in ALS patient spinal cord samples
exploratory · proposed · Score: 0.80

See Also (15)

Packard Center for ALS Research
institution · KG edge: activates
ALS2 (Alsin)
gene · KG edge: associated_with
ALDH2 — Aldehyde Dehydrogenase 2
gene · KG edge: regulates
ABCA1 - ATP-Binding Cassette Transporter A1
gene · KG edge: regulates
TARDBP Mutations in Amyotrophic Lateral Sclerosis
disease · Pages share 4 hypotheses

Knowledge Graph (12 edges)

TARDBP associated_with neurodegeneration
TARDBP co_discussed PRMT1
TARDBP co_discussed PARP1
TARDBP co_discussed HSPA1A
TARDBP co_discussed G3BP1
TARDBP co_discussed SRPK1
TARDBP co_discussed HNRNPA2B1
TARDBP co_discussed NPM1
TARDBP co_discussed SYNCRIP
TARDBP interacts_with NTN1