Entity Detail — Knowledge Graph Node
This page aggregates everything SciDEX knows about LAMP2B: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.
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| Gene Symbol | LAMP2B |
| Target Class | Signaling Protein |
| Mechanism of Action | Prioritized from 1 SciDEX hypotheses, including: Microglia-Derived Extracellular Vesicle Engineering for Targeted Mitochondrial Delivery |
| Druggability | Low (0.40) |
| Clinical Stage | Phase I |
| Pathways | neurotrophin signaling, autophagy pathway |
| GeneCards | LAMP2B |
| Human Protein Atlas | LAMP2B |
| Associated Diseases | als, ms, neurodegeneration |
| Interactions | RAB27A, NMDAR, LAMP2 |
| SciDEX Target | View Target Profile |
| KG Connections | 38 knowledge graph edges |
| Databases | GeneCardsUniProtNCBI GeneHPASTRING |
Knowledge base pages for this entity
graph TD
LAMP2B["LAMP2B"] -->|"regulates"| autophagosome_lysosome_fusion["autophagosome-lysosome fusion"]
style autophagosome_lysosome_fusion fill:#1a2a3a,stroke:#ffd54f,stroke-width:1px,color:#fff
LAMP2B["LAMP2B"] -->|"studied in"| neurodegeneration["neurodegeneration"]
style neurodegeneration fill:#1a2a3a,stroke:#4fc3f7,stroke-width:1px,color:#fff
LAMP2B["LAMP2B"] -->|"interacts"| RAB27A["RAB27A"]
style RAB27A fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
LAMP2B["LAMP2B"] -->|"co discussed"| Synthetic_fusion_proteins["Synthetic fusion proteins"]
style Synthetic_fusion_proteins fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
LAMP2B["LAMP2B"] -->|"co discussed"| GJA1["GJA1"]
style GJA1 fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
RAB27A_1["RAB27A"] -->|"interacts"| LAMP2B["LAMP2B"]
style RAB27A_1 fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
ChR2["ChR2"] -->|"co discussed"| LAMP2B["LAMP2B"]
style ChR2 fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
BNIP3L["BNIP3L"] -->|"co discussed"| LAMP2B["LAMP2B"]
style BNIP3L fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
RHOT1["RHOT1"] -->|"co discussed"| LAMP2B["LAMP2B"]
style RHOT1 fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
PANX1["PANX1"] -->|"co discussed"| LAMP2B["LAMP2B"]
style PANX1 fill:#1a2a3a,stroke:#ce93d8,stroke-width:1px,color:#fff
style LAMP2B fill:#006494,stroke:#4fc3f7,stroke-width:2px,color:#e0e0e0,font-weight:bold| Target | Relation | Type | Str |
|---|---|---|---|
| Autophagosome-Lysosome Fusion | involved_in | process | 0.95 |
| Cardiomyocytes | expressed_in | cell_type | 0.85 |
| autophagosome-lysosome fusion | regulates | process | 0.70 |
| NMDA | regulates | gene | 0.60 |
| NMDAR | interacts_with | gene | 0.60 |
| neurotrophin signaling | participates_in | pathway | 0.55 |
| neurons | expressed_in | cell_type | 0.55 |
| RAB27A | associated_with | gene | 0.55 |
| autophagy pathway | participates_in | pathway | 0.55 |
| RAB27A | expressed_in | gene | 0.55 |
| microglia | expressed_in | cell_type | 0.55 |
| neurodegeneration | associated_with | disease | 0.43 |
| RAB27A | interacts_with | gene | 0.43 |
| Synthetic fusion proteins | co_discussed | gene | 0.40 |
| GJA1 | co_discussed | gene | 0.40 |
| LAMP2 | associated_with | gene | 0.35 |
| LAMP2A | associated_with | gene | 0.35 |
| ms | implicated_in | disease | 0.35 |
| als | implicated_in | disease | 0.35 |
| TARDBP | associated_with | gene | 0.35 |
| NMDA | associated_with | gene | 0.35 |
| DLG3 | associated_with | gene | 0.35 |
| TAR | associated_with | gene | 0.35 |
| HTT | associated_with | gene | 0.35 |
| neurodegeneration | implicated_in | disease | 0.35 |
| NMDAR | associated_with | gene | 0.35 |
| Source | Relation | Type | Str |
|---|---|---|---|
| h-d78123d1 | targets_gene | hypothesis | 0.90 |
| LAMP2 | associated_with | gene | 0.60 |
| LAMP2A | associated_with | gene | 0.60 |
| LAMP2 | interacts_with | gene | 0.60 |
| BDNF | expressed_in | gene | 0.55 |
| RAB27A | interacts_with | gene | 0.43 |
| ChR2 | co_discussed | gene | 0.40 |
| BNIP3L | co_discussed | gene | 0.40 |
| RHOT1 | co_discussed | gene | 0.40 |
| PANX1 | co_discussed | gene | 0.40 |
| RAB27A | co_discussed | gene | 0.40 |
| BNIP3 | co_discussed | gene | 0.40 |
Hypotheses where this entity is a therapeutic target
| Hypothesis | Score | Disease | Analysis |
|---|---|---|---|
| No targeting hypotheses | |||
Scientific analyses that reference this entity
neurodegeneration | 2026-04-01 | 7 hypotheses Top: 0.450
Scientific publications cited in analyses involving this entity
| Title & PMID | Authors | Journal | Year | Citations |
|---|---|---|---|---|
| No papers found | ||||