Entity Detail — Knowledge Graph Node
This page aggregates everything SciDEX knows about NMDA: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.
| Gene Symbol | NMDA |
| Aliases | GRIN2B, GRIN1 |
| Molecular Weight | 166 kDa |
| Pathways | glutamate signaling, unfolded protein response, oxidative stress response, mitochondrial function, sphingolipid metabolism |
| GeneCards | NMDA |
| Human Protein Atlas | NMDA |
| Taxonomy | ID |
| Cell Ontology (CL) | CL:0000122 |
| Associated Diseases | ALS, Alzheimer, Alzheimer'S Disease, Huntington, disease, epilepsy |
| Known Drugs/Compounds | memantine |
| Interactions | SLC17A7, PSD-95, TET2, ROS, VPS35, P2Y12 |
| KG Connections | 134 knowledge graph edges |
| Databases | GeneCardsUniProtNCBI GeneHPASTRING |
Knowledge base pages for this entity
graph TD
NMDA["<b>NMDA</b>"]
SYNAPTOPHYSINSYP["SYNAPTOPHYSINSYP"]
NMDA -->|"associated with"| SYNAPTOPHYSINSYP
Memantine["Memantine"]
Memantine -->|"activates"| NMDA
Memantine -->|"inhibits"| NMDA
GLUTAMATE["GLUTAMATE"]
GLUTAMATE -->|"co discussed"| NMDA
ALZHEIMER["ALZHEIMER"]
ALZHEIMER -->|"co discussed"| NMDA
ALZHEIMER_S["ALZHEIMER'S"]
ALZHEIMER_S -->|"co discussed"| NMDA
NEURODEGENERATION["NEURODEGENERATION"]
NEURODEGENERATION -->|"co discussed"| NMDA
style NMDA fill:#1a3a4a,stroke:#4fc3f7,stroke-width:3px,color:#e0e0e0| Target | Relation | Type | Str |
|---|---|---|---|
| glutamate signaling | participates_in | pathway | 0.85 |
| PSD-95 | associated_with | gene | 0.75 |
| neurons | expressed_in | cell_type | 0.75 |
| neurodegeneration | activates | disease | 0.65 |
| unfolded protein response | participates_in | pathway | 0.65 |
| oxidative stress response | participates_in | pathway | 0.65 |
| PSD-95 | interacts_with | gene | 0.65 |
| ALS | associated_with | disease | 0.60 |
| neurodegeneration | associated_with | disease | 0.60 |
| Huntington | associated_with | disease | 0.60 |
| Alzheimer | associated_with | disease | 0.60 |
| epilepsy | associated_with | disease | 0.60 |
| stroke | associated_with | disease | 0.60 |
| SQSTM1 | regulates | gene | 0.60 |
| Alzheimer's disease | regulates | disease | 0.60 |
| autophagy pathway | participates_in | pathway | 0.60 |
| ubiquitin-proteasome | participates_in | pathway | 0.60 |
| neurodegeneration | inhibits | disease | 0.60 |
| pyroptosis | participates_in | pathway | 0.60 |
| VPS35 | interacts_with | gene | 0.60 |
| epilepsy | inhibits | disease | 0.60 |
| NMDAR | causes | gene | 0.60 |
| epilepsy | causes | disease | 0.60 |
| schizophrenia | causes | disease | 0.60 |
| stroke | regulates | disease | 0.60 |
| epigenetic regulation | participates_in | pathway | 0.60 |
| blood-brain barrier | participates_in | pathway | 0.60 |
| neuroinflammation | inhibits | disease | 0.60 |
| microglia | expressed_in | cell_type | 0.60 |
| NF-kB signaling | participates_in | pathway | 0.60 |
| neuroinflammation | activates | disease | 0.60 |
| PSD95 | targets | gene | 0.55 |
| mitochondrial function | participates_in | pathway | 0.55 |
| sphingolipid metabolism | participates_in | pathway | 0.55 |
| neurotrophin signaling | participates_in | pathway | 0.55 |
| oligodendrocytes | expressed_in | cell_type | 0.55 |
| MAPK signaling | participates_in | pathway | 0.55 |
| SLC17A7 | activates | gene | 0.55 |
| epilepsy | activates | disease | 0.55 |
| PSD95 | expressed_in | gene | 0.55 |
| Alzheimer's disease | expressed_in | disease | 0.55 |
| tauopathy | expressed_in | disease | 0.55 |
| synaptic plasticity | participates_in | pathway | 0.55 |
| Alzheimer's disease | inhibits | disease | 0.55 |
| TET2 | activates | gene | 0.55 |
| ROS | activates | gene | 0.55 |
| astrocytes | expressed_in | cell_type | 0.55 |
| P2Y12 | activates | protein | 0.50 |
| AMPA RECEPTOR | activates | protein | 0.50 |
| NMDA RECEPTOR | activates | protein | 0.50 |
| Source | Relation | Type | Str |
|---|---|---|---|
| Memantine | activates | entity | 0.70 |
| Memantine | inhibits | entity | 0.70 |
| GAPDH | regulates | gene | 0.60 |
| HDAC6 | regulates | gene | 0.60 |
| ISG15 | regulates | gene | 0.60 |
| LAMP1 | regulates | gene | 0.60 |
| LC3 | regulates | gene | 0.60 |
| MAP1LC3 | regulates | gene | 0.60 |
| MAPT | regulates | gene | 0.60 |
| memantine | targets | drug | 0.60 |
| APP | inhibits | gene | 0.60 |
| NLRP3 | activates | gene | 0.60 |
| APOE | associated_with | gene | 0.60 |
| LRRK2 | interacts_with | gene | 0.60 |
| CRH | associated_with | gene | 0.60 |
| EAAT2 | inhibits | gene | 0.60 |
| AND | regulates | gene | 0.60 |
| AND | inhibits | gene | 0.60 |
| ABCA7 | activates | gene | 0.60 |
| GABA | activates | gene | 0.60 |
| CCL2 | activates | gene | 0.60 |
| LAMP2B | regulates | gene | 0.60 |
| BAK | activates | gene | 0.55 |
| BAX | activates | gene | 0.55 |
| JNK | activates | gene | 0.55 |
| ATP | activates | gene | 0.55 |
| NLGN1 | interacts_with | gene | 0.55 |
| GLUTAMATE | co_discussed | entity | 0.50 |
| ALZHEIMER | co_discussed | entity | 0.50 |
| ALZHEIMER'S | co_discussed | entity | 0.50 |
| NEURODEGENERATION | co_discussed | entity | 0.50 |
| AMYLOID | activates | gene | 0.50 |
| GENES | co_discussed | gene | 0.50 |
| PI3K | regulates | protein | 0.50 |
| Neurodegeneration | protects_against | disease | 0.50 |
| L-TYPE CALCIUM CHANNEL | inhibits | protein | 0.50 |
| GABA | inhibits | gene | 0.50 |
| VGLUT1 | associated_with | gene | 0.50 |
| DREBRIN | interacts_with | protein | 0.50 |
| DREBRIN | associated_with | protein | 0.50 |
| DREBRIN | regulates | protein | 0.50 |
| GRIN2A | activates | gene | 0.50 |
| Neurodegeneration | inhibits | disease | 0.50 |
| ATP | co_expressed_with | protein | 0.50 |
| GRIN2D | co_expressed_with | protein | 0.50 |
| AQP4 | co_expressed_with | gene | 0.50 |
| EAAT2 | co_expressed_with | protein | 0.50 |
| APP | co_expressed_with | gene | 0.50 |
| BDNF | co_expressed_with | gene | 0.50 |
| LAMP2B | associated_with | gene | 0.35 |
Hypotheses where this entity is a therapeutic target
| Hypothesis | Score | Disease | Analysis |
|---|---|---|---|
| Thalamocortical Synchrony Restoration via NMDA Modulation | 0.542 | neuroscience | Circuit-level neural dynamics in neurode |
| Cortico-Striatal Synchrony Restoration via NMDA Modulation | 0.500 | neuroscience | Circuit-level neural dynamics in neurode |
Scientific analyses that reference this entity
No analyses mention this entity
Scientific publications cited in analyses involving this entity
| Title & PMID | Authors | Journal | Year | Citations |
|---|---|---|---|---|
| Inspired by molecular dynamic simulation, exploring chemical constituents of alc [PMID:40166865] | Shinge J, Muthal A, Walhekar V, Bagul C, | Journal of biomolecular struct | 2026 | 0 |
| Cognitive loss after brain trauma results from sex-specific activation of synapt [PMID:40796363] | Arizanovska D, Bush GF, Dallera CA, Folo | Brain | 2026 | 0 |
| Inhibition of GluN2B-containing N-methyl-D-aspartate receptors by radiprodil. [PMID:40994429] | Banke TG, Regan MC, Perszyk RE, Zhang L, | Brain | 2026 | 0 |
| GluN2B-specific NMDAR positive allosteric modulation reverses cognitive and beha [PMID:41512078] | Ge Y, Tian T, Li B, Axerio-Cillies P, Ch | Sci Adv | 2026 | 0 |
| Zipper-interacting Protein Kinase Modulates Gene Expression Linked to Synaptic a [PMID:41526727] | Mei Y, Zheng L, He M, Wang L, Zhou Y et | Mol Neurobiol | 2026 | 0 |
| Multi-biofluid metabolomics coupled with gene network reveals stage-specific alt [PMID:41534821] | Cadaxo AS, Cotrin JC, Valente AP, Lopes | Brain Res | 2026 | 0 |
| Aberrant mRNA splicing and impaired hippocampal neurogenesis in Grin2b mutant mi [PMID:41675057] | Farsi Z, Nicolella A, Simmons SK, Shin W | iScience | 2026 | 0 |
| From synapse to system: mechanistic pathways of neural signaling dysfunction in [PMID:41799440] | Gupta R, Jha NK, Kumar N, Nagraik R, Rav | Front Cell Dev Biol | 2026 | 0 |
| Cellular Prion Protein Engages the N-Methyl-d-Aspartate Receptor through N- and [PMID:41860118] | Mayfield JE, Wang J, Tovell H, Taylor SS | Biochemistry | 2026 | 0 |
| Multisession epidural direct current stimulation of the auditory cortex mitigate [PMID:41747412] | Fernández Del Campo IS, Cebrián-León A, | Hearing research | 2026 | 0 |