gene

NLGN3

Entity Detail — Knowledge Graph Node

Understanding Entity Pages

This page aggregates everything SciDEX knows about NLGN3: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.

57Connections
0Hypotheses
0Analyses
37Outgoing
20Incoming

Summary

NLGN3 encodes neuroligin-3, a postsynaptic cell adhesion molecule critical for synapse formation, function, and plasticity. Mutations cause autism spectrum disorder and intellectual disability, and altered NLGN3 is implicated in Alzheimer's and Parkinson's disease synaptic dysfunction.

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🧬 Gene Info
Gene SymbolNLGN3
Full NameNeuroligin 3
ChromosomeXq13.1
Functionencodes a postsynaptic cell adhesion molecule that is essential for the formation, function, and plasticity of synapses throughout the mammalian brain.
Primary Expressionneurons throughout the brain, with particularly high levels in the cerebral cortex, hippocampus, and basal ganglia
Molecular Weight~165 kDa
Amino Acids461 aa
Exons19
PathwaysMtor, Neuroprotection, PI3K-mTOR, PI3K-mTOR pathway
UniProt IDQ9NZU4
NCBI Gene ID54413
Ensembl IDENSG00000174373
OMIM300336
GeneCardsNLGN3
Human Protein AtlasNLGN3
Associated DiseasesALS, high-grade gliomas
InteractionsADAM10, Rb, BRAIN INJURY, S6K1, AND, NEURON
KG Connections57 knowledge graph edges
DatabasesGeneCardsHPASTRING
🔮 Predicted Structure: NLGN3 — AlphaFold Q9NZU4 Click to expand

AI-predicted structure from AlphaFold | Powered by Mol*

Wiki Pages (19)

Knowledge base pages for this entity

Canonical Page

NLGN3 Gene

gene · 2091 words

X-Linked Intellectual Disability

disease · 3062 words

Synaptogenesis in Neurodegeneration

mechanism · 2923 words

Neurexin/Neuroligin Synaptic Adhesion Modulator Therapy in Neurodegeneration

mechanism · 2419 words

Dendritic Spine-Deficient Neurons

cell · 1928 words

GNAI3 — G Protein Subunit Alpha I3

gene · 1732 words

Pathway Diagram

graph TD
    NLGN3["<b>NLGN3</b>"]
    synapse["synapse"]
    NLGN3 -->|"regulates"| synapse
    excitatory_synaptic_transmission["excitatory synaptic transmission"]
    NLGN3 -->|"regulates"| excitatory_synaptic_transmission
    PI3K_mTOR(["PI3K-mTOR"])
    NLGN3 -->|"activates"| PI3K_mTOR
    glioblastoma{"glioblastoma"}
    NLGN3 -->|"activates"| glioblastoma
    FAK["FAK"]
    NLGN3 -->|"activates"| FAK
    PI3K_mTOR_pathway(["PI3K-mTOR pathway"])
    NLGN3 -->|"activates"| PI3K_mTOR_pathway
    high_grade_gliomas{"high-grade gliomas"}
    NLGN3 -->|"associated with"| high_grade_gliomas
    neurodegeneration["neurodegeneration"]
    NLGN3 -->|"implicated in"| neurodegeneration
    neuronal_activity(["neuronal activity"])
    neuronal_activity -->|"regulates"| NLGN3
    ADAM10["ADAM10"]
    ADAM10 -->|"activates"| NLGN3
    ADAM10 -->|"regulates"| NLGN3
    neuronal_activity -->|"activates"| NLGN3
    ADAM10_inhibitors["ADAM10 inhibitors"]
    ADAM10_inhibitors -->|"protects against"| NLGN3
    style NLGN3 fill:#1a3a4a,stroke:#4fc3f7,stroke-width:3px,color:#e0e0e0

Outgoing (37)

TargetRelationTypeStr
AKTactivatesentity0.95
Oxygen-Glucose Deprivation/Reperfusion Injuryprotects_againstprocess0.95
Ischemic Brain Injuryprotects_againstdisease0.95
MTORactivatesprotein0.90
Neuronal Cellexpressed_incell_type0.90

Incoming (20)

SourceRelationTypeStr
GNAI1mediatesprotein0.95
GNAI3mediatesprotein0.95
neuronal activityregulatesprocess0.70
ADAM10activatesprotein0.70
ADAM10regulatesprotein0.70

Targeting Hypotheses (0)

Hypotheses where this entity is a therapeutic target

HypothesisScoreDiseaseAnalysis
No targeting hypotheses

Mentioning Analyses (0)

Scientific analyses that reference this entity

No analyses mention this entity

Related Papers (0)

Scientific publications cited in analyses involving this entity

Title & PMIDAuthorsJournalYearCitations
No papers found