gene

HDAC11

Entity Detail — Knowledge Graph Node

Understanding Entity Pages

This page aggregates everything SciDEX knows about HDAC11: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.

62Connections
0Hypotheses
0Analyses
37Outgoing
25Incoming

Summary

Histone Deacetylase 11 - the sole class IV HDAC with roles in immune regulation, metabolism, and neuroinflammation

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🧬 Gene Info
Gene SymbolHDAC11
Full NameHDAC11
AliasesHistone Deacetylase 11
Chromosome3p25.2
Protein TypeGene
Functionencodes a protein of 347 amino acids with a molecular weight of approximately 39 kDa, making it the smallest mammalian HDAC.
Primary Expressionvarious brain regions including the cerebral cortex, hippocampus, cerebellum, and basal ganglia, with particular enrichment in neurons and, to a lesse
Molecular Weight39 kDa
Amino Acids347 aa
Exons13
PathwaysNF-κB
NCBI Gene IDSearch NCBI
GeneCardsHDAC11
Human Protein AtlasHDAC11
Associated DiseasesAlzheimer's disease, Parkinson's disease
InteractionsHDAC3, HDAC5, HDAC7
KG Connections62 knowledge graph edges
DatabasesGeneCardsUniProtHPASTRING

Wiki Pages (12)

Knowledge base pages for this entity

Canonical Page

HDAC11 Gene

gene · 1489 words

Epigenetic Dysregulation in Neurodegeneration

mechanism · 4376 words

Histone Modification Pathways in Neurodegeneration

mechanism · 3367 words

Epigenetics in Parkinson's Disease

mechanism · 2291 words

Valproic Acid in PSP (NCT00385710)

clinical · 2053 words

Histone Modifications

entity · 1662 words

Pathway Diagram

graph TD
    HDAC11["<b>HDAC11</b>"]
    Neurodegeneration{"Neurodegeneration"}
    HDAC11 -->|"regulates"| Neurodegeneration
    Parkinson{"Parkinson"}
    HDAC11 -->|"regulates"| Parkinson
    Alzheimer{"Alzheimer"}
    HDAC11 -->|"regulates"| Alzheimer
    Neuroinflammation{"Neuroinflammation"}
    HDAC11 -->|"regulates"| Neuroinflammation
    Inflammation{"Inflammation"}
    HDAC11 -->|"regulates"| Inflammation
    Huntington{"Huntington"}
    HDAC11 -->|"regulates"| Huntington
    Ms{"Ms"}
    HDAC11 -->|"regulates"| Ms
    HDAC2["HDAC2"]
    HDAC11 -->|"expressed in"| HDAC2
    SIRT7["SIRT7"]
    HDAC11 -->|"regulates"| SIRT7
    SIRT5["SIRT5"]
    HDAC11 -->|"regulates"| SIRT5
    BDNF["BDNF"]
    HDAC11 -->|"regulates"| BDNF
    SIRT1["SIRT1"]
    HDAC11 -->|"regulates"| SIRT1
    SIRT6["SIRT6"]
    SIRT6 -->|"regulates"| HDAC11
    BDNF -->|"regulates"| HDAC11
    HDAC3["HDAC3"]
    HDAC3 -->|"expressed in"| HDAC11
    style HDAC11 fill:#1a3a4a,stroke:#4fc3f7,stroke-width:3px,color:#e0e0e0

Outgoing (37)

TargetRelationTypeStr
Tumor Progressioninvolved_inprocess0.90
malignancyinvolved_inprocess0.75
Neurodegenerationregulatesdisease0.65
Parkinsonregulatesdisease0.65
Alzheimerregulatesdisease0.65

Incoming (25)

SourceRelationTypeStr
SIRT6regulatesgene0.60
BDNFregulatesgene0.60
HDAC3expressed_ingene0.60
TAUregulatesgene0.60
SIRT3regulatesgene0.60

Targeting Hypotheses (0)

Hypotheses where this entity is a therapeutic target

HypothesisScoreDiseaseAnalysis
No targeting hypotheses

Mentioning Analyses (0)

Scientific analyses that reference this entity

No analyses mention this entity

Related Papers (0)

Scientific publications cited in analyses involving this entity

Title & PMIDAuthorsJournalYearCitations
No papers found