gene

PGK1

Entity Detail — Knowledge Graph Node

Understanding Entity Pages

This page aggregates everything SciDEX knows about PGK1: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.

81Connections
0Hypotheses
0Analyses
50Outgoing
18Incoming

Summary

PGK1 is a gene implicated in neurodegeneration research. Key relationships include: activates, regulates, associated with. Associated with Als, Breast Cancer, Cancer. Connected to 67 entities in the SciDEX knowledge graph.

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🧬 Gene Info
Gene SymbolPGK1
Full NamePhosphoglycerate Kinase 1
ChromosomeXq21.1
Protein TypeEnzyme
FunctionPGK1 catalyzes the reversible conversion of 1,3-bisphosphoglycerate (1,3-BPG) to 3-phosphoglycerate (3-PG), generating ATP
Primary Expressionbrain tissue
Molecular Weight44.6 kDa
Amino Acids417 aa
PathwaysGlycolysis, Mtor
UniProt IDP00558
NCBI Gene ID5230
Ensembl IDENSG00000102144
OMIM311800
GeneCardsPGK1
Human Protein AtlasPGK1
Associated DiseasesAls, Cancer, Carcinoma, Glioblastoma, Tumor
Known Drugs/Compoundsterazosin, Terazosin, levodopa
InteractionsWNT7B, YBX1, NEURODEGENERATION, PARKINSON'S DISEASE, PARKINSON, ATP
KG Connections81 knowledge graph edges
DatabasesGeneCardsHPASTRING
🔮 Predicted Structure: PGK1 — AlphaFold P00558 Click to expand

AI-predicted structure from AlphaFold | Powered by Mol*

Wiki Pages (12)

Knowledge base pages for this entity

Canonical Page

PGK1 Gene

gene · 759 words

amiloride-als

clinical_trial · 3477 words

Integrated Stress Response in Alzheimer's Disease

mechanism · 2816 words

ARNT2 - Aryl Hydrocarbon Receptor Nuclear Translocator 2

gene · 1761 words

omega-3-fatty-acid-signaling-neurodegeneration

mechanism · 1610 words

Terazosin for Cardiac Autonomic Changes in Early Parkinson's Disease (NCT04386317)

clinical · 1146 words

Pathway Diagram

graph TD
    PGK1["<b>PGK1</b>"]
    methylglyoxal["methylglyoxal"]
    PGK1 -->|"produces"| methylglyoxal
    Carcinoma{"Carcinoma"}
    PGK1 -->|"associated with"| Carcinoma
    Cancer{"Cancer"}
    PGK1 -->|"associated with"| Cancer
    Tumor{"Tumor"}
    PGK1 -->|"associated with"| Tumor
    PGK1 -->|"therapeutic target"| Tumor
    Als{"Als"}
    PGK1 -->|"therapeutic target"| Als
    PGK1 -->|"therapeutic target"| Carcinoma
    PGK1 -->|"therapeutic target"| Cancer
    PTK2["PTK2"]
    PGK1 -->|"associated with"| PTK2
    Glycolysis(["Glycolysis"])
    PGK1 -->|"associated with"| Glycolysis
    AND["AND"]
    PGK1 -->|"therapeutic target"| AND
    DNA["DNA"]
    PGK1 -->|"therapeutic target"| DNA
    YWHAZ["YWHAZ"]
    YWHAZ -->|"associated with"| PGK1
    VDAC1["VDAC1"]
    VDAC1 -->|"associated with"| PGK1
    HNRNPA1["HNRNPA1"]
    HNRNPA1 -->|"associated with"| PGK1
    CANCER["CANCER"]
    CANCER -->|"associated with"| PGK1
    CANCER -->|"therapeutic target"| PGK1
    TP53["TP53"]
    TP53 -->|"therapeutic target"| PGK1
    GAIN["GAIN"]
    GAIN -->|"therapeutic target"| PGK1
    style PGK1 fill:#1a3a4a,stroke:#4fc3f7,stroke-width:3px,color:#e0e0e0

Outgoing (63)

TargetRelationTypeStr
methylglyoxalproducesprotein0.90
Hippocampal Atp Levelsregulatesbiomarker0.85
Glycolysisactivatespathway0.80
Tumoractivatesdisease0.75
Carcinomaassociated_withdisease0.65

Incoming (18)

SourceRelationTypeStr
APOE4downregulatesgene0.90
terazosinactivatesdrug0.80
Terazosinactivatesdrug0.80
YWHAZassociated_withgene0.60
VDAC1associated_withgene0.60

Targeting Hypotheses (0)

Hypotheses where this entity is a therapeutic target

HypothesisScoreDiseaseAnalysis
No targeting hypotheses

Mentioning Analyses (0)

Scientific analyses that reference this entity

No analyses mention this entity

Related Papers (0)

Scientific publications cited in analyses involving this entity

Title & PMIDAuthorsJournalYearCitations
No papers found