Entity Detail — Knowledge Graph Node
This page aggregates everything SciDEX knows about GAPDH: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.
GAPDH is a gene implicated in neurodegeneration research. Key relationships include: associated with, regulates, inhibits. Associated with ALS, Aging, Als. Connected to 581 entities in the SciDEX knowledge graph.
| Gene Symbol | GAPDH |
| Full Name | Glyceraldehyde-3-Phosphate Dehydrogenase |
| Chromosome | 12p13.31 |
| Protein Type | Enzyme |
| Function | is an important component in the neurobiology of neurodegenerative diseases. |
| Molecular Weight | 37 kDa |
| Pathways | Akt, Apoptosis, Autophagy, Cell Cycle, Chaperone |
| UniProt ID | P04406 |
| NCBI Gene ID | 2597 |
| Ensembl ID | ENSG00000111640 |
| OMIM | 138400 |
| GeneCards | GAPDH |
| Human Protein Atlas | GAPDH |
| Associated Diseases | Aging, Als, Alzheimer, Amyotrophic Lateral Sclerosis, Ataxia, Atherosclerosis |
| Known Drugs/Compounds | RAPAMYCIN, dimethyl fumarate, levodopa, rapamycin |
| Interactions | ATG10, SQSTM1, TNF, PYCARD, MAP1LC3B, IL1B |
| KG Connections | 1401 knowledge graph edges |
| Databases | GeneCardsHPASTRING |
Knowledge base pages for this entity
flowchart TD
GAPDH(["GAPDH"])
Als["Als"]
glycolysis["glycolysis"]
IFN_gamma_mRNA(["IFN-gamma mRNA"])
IFN_gamma(["IFN-gamma"])
Glycolysis["Glycolysis"]
Neurodegeneration["Neurodegeneration"]
Parkinson["Parkinson"]
Cancer["Cancer"]
Tumor["Tumor"]
Aging["Aging"]
Mtor["Mtor"]
GAPDH -->|"activates"| Als
GAPDH -->|"participates in"| glycolysis
GAPDH -->|"interacts with"| IFN_gamma_mRNA
GAPDH -->|"regulates"| IFN_gamma
glycolysis -->|"regulates"| GAPDH
GAPDH -->|"regulates"| Glycolysis
GAPDH -->|"activates"| Neurodegeneration
GAPDH -->|"associated with"| Parkinson
GAPDH -->|"regulates"| Cancer
GAPDH -->|"regulates"| Tumor
GAPDH -.->|"inhibits"| Neurodegeneration
GAPDH -->|"regulates"| Aging
GAPDH -->|"activates"| Aging
GAPDH -->|"therapeutic target"| Cancer
GAPDH -->|"associated with"| Mtor
style GAPDH fill:#006494,stroke:#4fc3f7,stroke-width:3px,color:#e0e0e0| Target | Relation | Type | Str |
|---|---|---|---|
| Als | activates | disease | 1.00 |
| glycolysis | participates_in | pathway | 0.90 |
| IFN-gamma mRNA | interacts_with | protein | 0.90 |
| IFN-gamma | regulates | protein | 0.90 |
| Glycolysis | involved_in | pathway | 0.90 |
| neural stem cells | activates | cell_type | 0.90 |
| LC3 | regulates | gene | 0.80 |
| Psoriasis | associated_with | disease | 0.80 |
| RAPAMYCIN | activates | drug | 0.80 |
| RNA | activates | gene | 0.80 |
| MAP1LC3 | regulates | gene | 0.80 |
| oxidative stress response | participates_in | pathway | 0.80 |
| ubiquitin-proteasome | participates_in | pathway | 0.80 |
| apoptosis pathway | participates_in | pathway | 0.80 |
| neural stem cells | regulates | cell_type | 0.80 |
| Glycolysis | regulates | pathway | 0.80 |
| Neurodegeneration | activates | disease | 0.75 |
| Parkinson | associated_with | disease | 0.75 |
| Cancer | regulates | disease | 0.75 |
| Tumor | regulates | disease | 0.75 |
| Neurodegeneration | inhibits | disease | 0.75 |
| Aging | regulates | disease | 0.75 |
| Aging | activates | disease | 0.75 |
| Cancer | therapeutic_target | disease | 0.75 |
| MTOR | regulates | gene | 0.70 |
| STX17 | regulates | gene | 0.70 |
| ULK1 | regulates | gene | 0.70 |
| adenosine | activates | neurotransmitter | 0.70 |
| Mtor | associated_with | pathway | 0.70 |
| Glycolysis | associated_with | pathway | 0.70 |
| Oxidative Stress | activates | pathway | 0.70 |
| MTORC1 | associated_with | gene | 0.70 |
| CANCER | regulates | gene | 0.70 |
| Parkinson's disease | activates | disease | 0.70 |
| autophagy pathway | participates_in | pathway | 0.70 |
| Parkinson's disease | regulates | disease | 0.70 |
| RNA | regulates | gene | 0.70 |
| stem cells | expressed_in | cell_type | 0.70 |
| epigenetic regulation | participates_in | pathway | 0.70 |
| Wnt signaling | participates_in | pathway | 0.70 |
| neural stem cells | interacts_with | cell_type | 0.70 |
| LC3B | activates | gene | 0.70 |
| neurons | activates | cell_type | 0.70 |
| Amyotrophic Lateral Sclerosis | associated_with | disease | 0.65 |
| Ataxia | associated_with | disease | 0.65 |
| Als | associated_with | disease | 0.65 |
| Huntington | associated_with | disease | 0.65 |
| Tumor | associated_with | disease | 0.65 |
| Cancer | associated_with | disease | 0.65 |
| Carcinoma | associated_with | disease | 0.65 |
| Source | Relation | Type | Str |
|---|---|---|---|
| AUTOPHAGY | activates | process | 0.95 |
| Serotonin | modulates | compound | 0.90 |
| rapamycin | targets | drug | 0.90 |
| glycolysis | regulates | pathway | 0.80 |
| ATG | activates | gene | 0.80 |
| AKT1 | therapeutic_target | gene | 0.70 |
| AR | activates | gene | 0.70 |
| CTSB | interacts_with | gene | 0.70 |
| CALCOCO2 | regulates | gene | 0.70 |
| OXIDATIVE STRESS | activates | gene | 0.70 |
| AUTOPHAGY | associated_with | gene | 0.70 |
| NEURODEGENERATION | activates | gene | 0.70 |
| AMPK | regulates | gene | 0.70 |
| ATG | regulates | gene | 0.70 |
| STIP1 | associated_with | gene | 0.60 |
| LGALS3 | associated_with | gene | 0.60 |
| HSPA8 | associated_with | gene | 0.60 |
| MCOLN1 | associated_with | gene | 0.60 |
| SQSTM1 | associated_with | gene | 0.60 |
| SOD1 | associated_with | gene | 0.60 |
| BCL2 | associated_with | gene | 0.60 |
| CTSB | associated_with | gene | 0.60 |
| TPP1 | associated_with | gene | 0.60 |
| GLA | associated_with | gene | 0.60 |
| CALCINEURIN | activates | gene | 0.60 |
| ATG12 | activates | gene | 0.60 |
| STUB1 | associated_with | gene | 0.60 |
| PPARGC1A | associated_with | gene | 0.60 |
| TARDBP | associated_with | gene | 0.60 |
| TREH | associated_with | gene | 0.60 |
| BECN1 | associated_with | gene | 0.60 |
| ACTB | associated_with | gene | 0.60 |
| CDC42 | associated_with | gene | 0.60 |
| CASP3 | associated_with | gene | 0.60 |
| SQSTM1 | regulates | gene | 0.60 |
| TUBB3 | regulates | gene | 0.60 |
| STK11 | regulates | gene | 0.60 |
| VIM | regulates | gene | 0.60 |
| HDAC6 | regulates | gene | 0.60 |
| OPTN | associated_with | gene | 0.60 |
| ULK1 | associated_with | gene | 0.60 |
| CALCOCO2 | associated_with | gene | 0.60 |
| STX17 | associated_with | gene | 0.60 |
| KAT8 | associated_with | gene | 0.60 |
| RB1CC1 | associated_with | gene | 0.60 |
| SIRT1 | associated_with | gene | 0.60 |
| LC3 | associated_with | gene | 0.60 |
| SNAP29 | associated_with | gene | 0.60 |
| RB1 | associated_with | gene | 0.60 |
| KAT2B | associated_with | gene | 0.60 |
Hypotheses where this entity is a therapeutic target
| Hypothesis | Score | Disease | Analysis |
|---|---|---|---|
| No targeting hypotheses | |||
Scientific analyses that reference this entity
No analyses mention this entity
Scientific publications cited in analyses involving this entity
| Title & PMID | Authors | Journal | Year | Citations |
|---|---|---|---|---|
| No papers found | ||||