gene

GEPHYRIN

Entity Detail — Knowledge Graph Node

Understanding Entity Pages

This page aggregates everything SciDEX knows about GEPHYRIN: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.

50Connections
0Hypotheses
0Analyses
40Outgoing
10Incoming

Summary

Gephyrin is a crucial scaffolding protein that clusters GABA-A and glycine receptors at inhibitory synapses, essential for inhibitory synaptic transmission and also involved in molybdenum cofactor synthesis. Associated with epilepsy, Alzheimer's disease, and Parkinson's disease.

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🧬 Gene Info
Gene SymbolGPHN
Full NameGephyrin
Chromosome14q23.3
Protein TypeScaffold Protein
FunctionGephyrin is a 93 kDa protein that forms a hexagonal lattice at inhibitory synapses
Molecular Weight93 kDa
UniProt IDQ9NQX3
NCBI Gene ID10254
Ensembl IDENSG00000171680
OMIM603930
GeneCardsGPHN
Human Protein AtlasGPHN
Associated Diseasesneurodegeneration
InteractionsPI3K, AKT, CX3CR1, NLGN1, NLGN2, SYNAPSIN2
KG Connections50 knowledge graph edges
DatabasesGeneCardsHPASTRING
🔮 Predicted Structure: GEPHYRIN — AlphaFold Q9NQX3 Click to expand

AI-predicted structure from AlphaFold | Powered by Mol*

Wiki Pages (21)

Knowledge base pages for this entity

Canonical Page

GEPHYRIN

gene · 1694 words

CNTN6 — Contactin 6

gene · 4611 words

CNTN3 — Contactin 3

gene · 4253 words

ZDHHC13 — Zinc Finger DHHC-Type Containing 13

gene · 4215 words

Synaptic Biomarkers in Neurodegeneration

biomarker · 2754 words

stiff-person-syndrome

disease · 2650 words

Pathway Diagram

graph TD
    GEPHYRIN["<b>GEPHYRIN</b>"]
    Ms{"Ms"}
    GEPHYRIN -->|"inhibits"| Ms
    Depression{"Depression"}
    GEPHYRIN -->|"inhibits"| Depression
    PI3K["PI3K"]
    GEPHYRIN -->|"inhibits"| PI3K
    CYTOKINES["CYTOKINES"]
    GEPHYRIN -->|"inhibits"| CYTOKINES
    AKT["AKT"]
    GEPHYRIN -->|"inhibits"| AKT
    Synaptic_Plasticity(["Synaptic Plasticity"])
    GEPHYRIN -->|"inhibits"| Synaptic_Plasticity
    Akt(["Akt"])
    GEPHYRIN -->|"inhibits"| Akt
    Pi3K(["Pi3K"])
    GEPHYRIN -->|"inhibits"| Pi3K
    neurodegeneration["neurodegeneration"]
    GEPHYRIN -->|"implicated in"| neurodegeneration
    style GEPHYRIN fill:#1a3a4a,stroke:#4fc3f7,stroke-width:3px,color:#e0e0e0

Outgoing (40)

TargetRelationTypeStr
Msinhibitsdisease0.65
Depressioninhibitsdisease0.65
Alsregulatesdisease0.65
Depressionregulatesdisease0.65
Alsinhibitsdisease0.65

Incoming (10)

SourceRelationTypeStr
PKCregulatesgene0.60
CALCINEURINregulatesgene0.60
SNAP25regulatesgene0.60
NLGN2interacts_withgene0.60
SYNAPSIN2inhibitsgene0.60

Targeting Hypotheses (0)

Hypotheses where this entity is a therapeutic target

HypothesisScoreDiseaseAnalysis
No targeting hypotheses

Mentioning Analyses (0)

Scientific analyses that reference this entity

No analyses mention this entity

Related Papers (0)

Scientific publications cited in analyses involving this entity

Title & PMIDAuthorsJournalYearCitations
No papers found