Entity Detail — Knowledge Graph Node
This page aggregates everything SciDEX knows about TCF3: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.
TCF3 is a gene implicated in neurodegeneration research. Key relationships include: activates, therapeutic target, regulates. Associated with Aging, Als, Alzheimer. Connected to 44 entities in the SciDEX knowledge graph.
| Gene Symbol | TCF3 |
| Full Name | Transcription Factor 3 |
| Chromosome | 19p13.3 |
| Protein Type | Transcription Factor |
| Function | is a basic helix-loop-helix (bHLH) transcription factor that plays critical roles in lymphocyte development, myogenesis, and neurogenesis [@e2a_bhlh_2011]. |
| Primary Expression | the ventricular zone (VZ) and subventricular zone (SVZ), where neural stem cells reside |
| Pathways | Notch, Wnt, Notch signaling |
| UniProt ID | P15923 |
| NCBI Gene ID | 6929 |
| Ensembl ID | ENSG00000171539 |
| GeneCards | TCF3 |
| Human Protein Atlas | TCF3 |
| Basic region | DNA-binding domain that contacts E-box consensus sequences (CANNTG) |
| Helix-loop-helix domain | Mediates protein-protein dimerization with other bHLH factors |
| Activation domains | Two transcriptional activation domains (AD1 and AD2) at the N-terminus |
| Associated Diseases | Leukemia, Cognitive Impairment, Neurodevelopmental Disorders |
| Interactions | YBX1, LRP1, CANCER, GENE MUTATIONS, AND, RRM1 |
| KG Connections | 64 knowledge graph edges |
| Databases | GeneCardsHPASTRING |
Knowledge base pages for this entity
graph TD
TCF3["<b>TCF3</b>"]
Cancer{"Cancer"}
TCF3 -->|"activates"| Cancer
Carcinoma{"Carcinoma"}
TCF3 -->|"activates"| Carcinoma
TCF3 -->|"therapeutic target"| Cancer
TCF3 -->|"therapeutic target"| Carcinoma
Als{"Als"}
TCF3 -->|"regulates"| Als
Alzheimer{"Alzheimer"}
TCF3 -->|"therapeutic target"| Alzheimer
TCF3 -->|"regulates"| Cancer
Aging{"Aging"}
TCF3 -->|"activates"| Aging
Ms{"Ms"}
TCF3 -->|"activates"| Ms
Leukemia{"Leukemia"}
TCF3 -->|"activates"| Leukemia
RRM1["RRM1"]
TCF3 -->|"activates"| RRM1
YBX1["YBX1"]
TCF3 -->|"activates"| YBX1
CTNNB1["CTNNB1"]
CTNNB1 -->|"interacts with"| TCF3
LRP1["LRP1"]
LRP1 -->|"activates"| TCF3
YBX1 -->|"activates"| TCF3
LRP1 -->|"therapeutic target"| TCF3
RRM1 -->|"activates"| TCF3
MYC["MYC"]
MYC -->|"regulates"| TCF3
CDK9["CDK9"]
CDK9 -->|"regulates"| TCF3
TBX3["TBX3"]
TBX3 -->|"regulates"| TCF3
EP300["EP300"]
EP300 -->|"activates"| TCF3
FGFR3["FGFR3"]
FGFR3 -->|"activates"| TCF3
GENE_MUTATIONS["GENE MUTATIONS"]
GENE_MUTATIONS -->|"activates"| TCF3
CANCER["CANCER"]
CANCER -->|"activates"| TCF3
style TCF3 fill:#1a3a4a,stroke:#4fc3f7,stroke-width:3px,color:#e0e0e0| Target | Relation | Type | Str |
|---|---|---|---|
| Cancer | activates | disease | 0.65 |
| Carcinoma | activates | disease | 0.65 |
| Cancer | therapeutic_target | disease | 0.65 |
| Carcinoma | therapeutic_target | disease | 0.65 |
| Als | regulates | disease | 0.65 |
| Alzheimer | therapeutic_target | disease | 0.65 |
| Cancer | regulates | disease | 0.65 |
| Aging | activates | disease | 0.65 |
| Ms | activates | disease | 0.65 |
| Leukemia | activates | disease | 0.65 |
| Neurodegeneration | expressed_in | disease | 0.65 |
| Alzheimer | expressed_in | disease | 0.65 |
| ALS | phosphorylates | disease | 0.65 |
| RRM1 | activates | gene | 0.64 |
| YBX1 | activates | gene | 0.60 |
| LRP1 | activates | gene | 0.60 |
| YBX1 | therapeutic_target | gene | 0.60 |
| LATS2 | therapeutic_target | gene | 0.60 |
| DISC1 | therapeutic_target | gene | 0.60 |
| TLR2 | therapeutic_target | gene | 0.60 |
| APC | associated_with | gene | 0.60 |
| POLE | therapeutic_target | gene | 0.60 |
| SLC16A1 | regulates | gene | 0.60 |
| EP300 | regulates | gene | 0.60 |
| CANCER | activates | gene | 0.60 |
| GENE MUTATIONS | activates | gene | 0.60 |
| ALZHEIMER'S DISEASE | therapeutic_target | gene | 0.60 |
| AXIN | therapeutic_target | gene | 0.60 |
| Wnt | therapeutic_target | pathway | 0.60 |
| CANCER | regulates | gene | 0.60 |
| APOPTOSIS | regulates | gene | 0.60 |
| Apoptosis | regulates | pathway | 0.60 |
| Wnt | regulates | pathway | 0.60 |
| Histone Modification | regulates | pathway | 0.60 |
| Wnt | expressed_in | pathway | 0.60 |
| AND | activates | gene | 0.60 |
| Entorhinal Cortex | expressed_in | brain_region | 0.55 |
| Temporal Lobe | expressed_in | brain_region | 0.55 |
| Cortex | expressed_in | brain_region | 0.55 |
| Hippocampus | expressed_in | brain_region | 0.55 |
| GENE EXPRESSION | expressed_in | concept | 0.50 |
| TEMPORAL LOBE | expressed_in | concept | 0.50 |
| Hippocampus | associated_with | entity | 0.50 |
| Source | Relation | Type | Str |
|---|---|---|---|
| CTNNB1 | interacts_with | protein | 0.64 |
| LRP1 | activates | gene | 0.60 |
| YBX1 | activates | gene | 0.60 |
| LRP1 | therapeutic_target | gene | 0.60 |
| MYC | regulates | gene | 0.60 |
| CDK9 | regulates | gene | 0.60 |
| TBX3 | regulates | gene | 0.60 |
| EP300 | activates | gene | 0.60 |
| FGFR3 | activates | gene | 0.60 |
| WNT7B | expressed_in | gene | 0.60 |
| E2F1 | regulates | gene | 0.60 |
| MAPT | regulates | gene | 0.60 |
| RRM1 | activates | gene | 0.60 |
| GENE MUTATIONS | activates | gene | 0.60 |
| CANCER | activates | gene | 0.60 |
| AND | activates | gene | 0.60 |
| NEURODEGENERATION | expressed_in | gene | 0.60 |
| ALZHEIMER | expressed_in | gene | 0.60 |
| WNT | expressed_in | gene | 0.60 |
| AND | expressed_in | gene | 0.60 |
| ALZHEIMER'S DISEASE | expressed_in | gene | 0.60 |
Hypotheses where this entity is a therapeutic target
| Hypothesis | Score | Disease | Analysis |
|---|---|---|---|
| No targeting hypotheses | |||
Scientific analyses that reference this entity
No analyses mention this entity
Scientific publications cited in analyses involving this entity
| Title & PMID | Authors | Journal | Year | Citations |
|---|---|---|---|---|
| No papers found | ||||