Entity Detail — Knowledge Graph Node
This page aggregates everything SciDEX knows about TREX1: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.
TREX1 is a gene implicated in neurodegeneration research. Key relationships include: interacts with, activates, therapeutic target. Associated with Aging, Als, Cancer. Connected to 53 entities in the SciDEX knowledge graph.
| Gene Symbol | TREX1 |
| Full Name | Three Prime Repair Exonuclease 1 |
| Chromosome | 3p21.31 |
| Function | is a gene located on chromosome 3p21. |
| Primary Expression | Ubiquitously expressed; high expression in brain, liver, spleen |
| Molecular Weight | 33.9 kDa |
| Amino Acids | 314 aa |
| Exons | 3 |
| Pathways | Nf-Κb |
| UniProt ID | Q9NSW9 |
| NCBI Gene ID | 9349 |
| Ensembl ID | ENSG00000213465 |
| OMIM | 607400 |
| GeneCards | TREX1 |
| Human Protein Atlas | TREX1 |
| Associated Diseases | Inflammation |
| Interactions | CD8, STING, CGAS, VCP, NEIL1, POLD1 |
| KG Connections | 82 knowledge graph edges |
| Databases | GeneCardsHPASTRING |
Knowledge base pages for this entity
graph TD
TREX1["<b>TREX1</b>"]
Als{"Als"}
TREX1 -->|"regulates"| Als
Ms{"Ms"}
TREX1 -->|"regulates"| Ms
TREX1 -->|"activates"| Ms
Cancer{"Cancer"}
TREX1 -->|"activates"| Cancer
Senescence{"Senescence"}
TREX1 -->|"interacts with"| Senescence
TREX1 -->|"interacts with"| Ms
IKBKG["IKBKG"]
TREX1 -->|"regulates"| IKBKG
PSMB8["PSMB8"]
TREX1 -->|"associated with"| PSMB8
Nf__b(["Nf-Kappab"])
TREX1 -->|"regulates"| Nf__b
CD8["CD8"]
TREX1 -->|"activates"| CD8
CANCER["CANCER"]
TREX1 -->|"activates"| CANCER
STING["STING"]
TREX1 -->|"activates"| STING
SAMHD1["SAMHD1"]
SAMHD1 -->|"associated with"| TREX1
style TREX1 fill:#1a3a4a,stroke:#4fc3f7,stroke-width:3px,color:#e0e0e0| Target | Relation | Type | Str |
|---|---|---|---|
| ds-83b31ef18d49 | provides_data_for | dataset | 1.00 |
| STING activation | inhibits | process | 0.90 |
| STING | activates | gene | 0.80 |
| Cancer | activates | disease | 0.75 |
| CD8 | activates | gene | 0.70 |
| CGAS | activates | gene | 0.70 |
| DNA | activates | gene | 0.70 |
| Als | regulates | disease | 0.65 |
| Ms | regulates | disease | 0.65 |
| Ms | activates | disease | 0.65 |
| Senescence | interacts_with | disease | 0.65 |
| Ms | interacts_with | disease | 0.65 |
| Inflammation | treats | disease | 0.65 |
| Aging | therapeutic_target | disease | 0.65 |
| Senescence | therapeutic_target | disease | 0.65 |
| Tumor | inhibits | disease | 0.65 |
| Als | inhibits | disease | 0.65 |
| Tumor | activates | disease | 0.65 |
| Als | activates | disease | 0.65 |
| Inflammation | associated_with | disease | 0.65 |
| Aging | activates | disease | 0.65 |
| Senescence | activates | disease | 0.65 |
| IKBKG | regulates | gene | 0.60 |
| PSMB8 | associated_with | gene | 0.60 |
| VCP | interacts_with | gene | 0.60 |
| NEIL1 | interacts_with | gene | 0.60 |
| POLD1 | interacts_with | gene | 0.60 |
| POT1 | interacts_with | gene | 0.60 |
| MRE11 | interacts_with | gene | 0.60 |
| MUTYH | interacts_with | gene | 0.60 |
| SAMHD1 | interacts_with | gene | 0.60 |
| NBS1 | interacts_with | gene | 0.60 |
| LMNA | interacts_with | gene | 0.60 |
| WRN | interacts_with | gene | 0.60 |
| MDM2 | interacts_with | gene | 0.60 |
| CTC1 | interacts_with | gene | 0.60 |
| ATM | interacts_with | gene | 0.60 |
| CGAS | therapeutic_target | gene | 0.60 |
| STING | therapeutic_target | gene | 0.60 |
| UBIQUITIN | activates | gene | 0.60 |
| RNASEH2B | activates | gene | 0.60 |
| Rb | therapeutic_target | protein | 0.60 |
| Nf-Κb | regulates | pathway | 0.60 |
| CANCER | activates | gene | 0.60 |
| COMPLEMENT | interacts_with | gene | 0.60 |
| P53 | interacts_with | gene | 0.60 |
| Complement | interacts_with | pathway | 0.60 |
| AGING | therapeutic_target | gene | 0.60 |
| CGAS-STING | therapeutic_target | gene | 0.60 |
| IFN | activates | gene | 0.60 |
| Source | Relation | Type | Str |
|---|---|---|---|
| ds-83b31ef18d49 | data_in | dataset | 1.00 |
| SAMHD1 | associated_with | gene | 0.60 |
| TP53 | inhibits | gene | 0.60 |
| TRIM24 | activates | gene | 0.60 |
| ARID1A | activates | gene | 0.60 |
| RNASEH2B | activates | gene | 0.60 |
| CD8 | activates | gene | 0.60 |
| CGAS | therapeutic_target | gene | 0.60 |
| STING | therapeutic_target | gene | 0.60 |
| CGAS | activates | gene | 0.60 |
| STING | activates | gene | 0.60 |
| PSMB8 | associated_with | gene | 0.60 |
| INFLAMMATION | treats | gene | 0.60 |
| DSDNA | activates | gene | 0.60 |
| P53 | activates | gene | 0.60 |
| AND | activates | gene | 0.60 |
| INFLAMMATION | associated_with | gene | 0.60 |
| AND | therapeutic_target | gene | 0.60 |
| AGING | therapeutic_target | gene | 0.60 |
| CGAS-STING | therapeutic_target | gene | 0.60 |
| AGING | activates | gene | 0.60 |
| benchmark_ot_ad_answer_key:TREX1 | data_in | dataset_row | 0.00 |
Hypotheses where this entity is a therapeutic target
| Hypothesis | Score | Disease | Analysis |
|---|---|---|---|
| No targeting hypotheses | |||
Scientific analyses that reference this entity
No analyses mention this entity
Scientific publications cited in analyses involving this entity
| Title & PMID | Authors | Journal | Year | Citations |
|---|---|---|---|---|
| No papers found | ||||