gene

TREX1

Entity Detail — Knowledge Graph Node

Understanding Entity Pages

This page aggregates everything SciDEX knows about TREX1: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.

82Connections
0Hypotheses
0Analyses
50Outgoing
22Incoming

Summary

TREX1 is a gene implicated in neurodegeneration research. Key relationships include: interacts with, activates, therapeutic target. Associated with Aging, Als, Cancer. Connected to 53 entities in the SciDEX knowledge graph.

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🧬 Gene Info
Gene SymbolTREX1
Full NameThree Prime Repair Exonuclease 1
Chromosome3p21.31
Functionis a gene located on chromosome 3p21.
Primary ExpressionUbiquitously expressed; high expression in brain, liver, spleen
Molecular Weight33.9 kDa
Amino Acids314 aa
Exons3
PathwaysNf-Κb
UniProt IDQ9NSW9
NCBI Gene ID9349
Ensembl IDENSG00000213465
OMIM607400
GeneCardsTREX1
Human Protein AtlasTREX1
Associated DiseasesInflammation
InteractionsCD8, STING, CGAS, VCP, NEIL1, POLD1
KG Connections82 knowledge graph edges
DatabasesGeneCardsHPASTRING
🔮 Predicted Structure: TREX1 — AlphaFold Q9NSW9 Click to expand

AI-predicted structure from AlphaFold | Powered by Mol*

Wiki Pages (21)

Knowledge base pages for this entity

Canonical Page

TREX1 — Three Prime Repair Exonuclease 1

gene · 1008 words

dna-damage-repair

mechanism · 3555 words

DNA Sensing Pathways in Neurodegeneration

mechanism · 3156 words

Interferon Signaling in Neurodegeneration

mechanism · 2944 words

cadasil

disease · 2354 words

Mitochondrial Quality Control Network Pathway

mechanism · 1709 words

Pathway Diagram

graph TD
    TREX1["<b>TREX1</b>"]
    Als{"Als"}
    TREX1 -->|"regulates"| Als
    Ms{"Ms"}
    TREX1 -->|"regulates"| Ms
    TREX1 -->|"activates"| Ms
    Cancer{"Cancer"}
    TREX1 -->|"activates"| Cancer
    Senescence{"Senescence"}
    TREX1 -->|"interacts with"| Senescence
    TREX1 -->|"interacts with"| Ms
    IKBKG["IKBKG"]
    TREX1 -->|"regulates"| IKBKG
    PSMB8["PSMB8"]
    TREX1 -->|"associated with"| PSMB8
    Nf__b(["Nf-Kappab"])
    TREX1 -->|"regulates"| Nf__b
    CD8["CD8"]
    TREX1 -->|"activates"| CD8
    CANCER["CANCER"]
    TREX1 -->|"activates"| CANCER
    STING["STING"]
    TREX1 -->|"activates"| STING
    SAMHD1["SAMHD1"]
    SAMHD1 -->|"associated with"| TREX1
    style TREX1 fill:#1a3a4a,stroke:#4fc3f7,stroke-width:3px,color:#e0e0e0

Outgoing (60)

TargetRelationTypeStr
ds-83b31ef18d49provides_data_fordataset1.00
STING activationinhibitsprocess0.90
STINGactivatesgene0.80
Canceractivatesdisease0.75
CD8activatesgene0.70

Incoming (22)

SourceRelationTypeStr
ds-83b31ef18d49data_indataset1.00
SAMHD1associated_withgene0.60
TP53inhibitsgene0.60
TRIM24activatesgene0.60
ARID1Aactivatesgene0.60

Targeting Hypotheses (0)

Hypotheses where this entity is a therapeutic target

HypothesisScoreDiseaseAnalysis
No targeting hypotheses

Mentioning Analyses (0)

Scientific analyses that reference this entity

No analyses mention this entity

Related Papers (0)

Scientific publications cited in analyses involving this entity

Title & PMIDAuthorsJournalYearCitations
No papers found