gene

APP

Entity Detail — Knowledge Graph Node

Understanding Entity Pages

This page aggregates everything SciDEX knows about APP: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.

6312Connections
3Hypotheses
30Analyses
50Outgoing
50Incoming

Summary

Amyloid Precursor Protein (APP) is a type I transmembrane protein critical for neuronal development, synapse formation, and iron homeostasis. APP is cleaved by two competing pathways: the non-amyloidogenic pathway (alpha-secretase ADAM10) producing neuroprotective sAPPalpha, and the amyloidogenic pathway (BACE1 and gamma-secretase) producing amyloid-beta peptides (Abeta40 and Abeta42). Accumulation of Abeta42 triggers the amyloid cascade hypothesis of Alzheimer's disease. Over 50 familial AD mutations in APP increase Abeta42 production or aggregation propensity. APP is located on chromosome 21, explaining early-onset AD in Down syndrome. Current therapies target APP processing (BACE1 inhibitors, gamma-secretase modulators) or Abeta clearance (anti-amyloid antibodies like lecanemab and donanemab).

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🧬 Gene Info
Gene SymbolAPP
Full NameAmyloid Precursor Protein
Chromosome21q21.3
Protein TypeProtein
Functionis a type I transmembrane glycoprotein that plays a central role in the pathogenesis of Alzheimer's disease (AD).
Primary ExpressionUbiquitous, highest in brain
Molecular Weight~110 kDa
Exons18
PathwaysAmyloid, Angiogenesis, Apoptosis, Autophagy, Blood-Brain Barrier
UniProt IDP05067
NCBI Gene ID351
Ensembl IDENSG00000142192
OMIM104760
GeneCardsAPP
Human Protein AtlasAPP
Associated DiseasesAD, ALS, AMI, AMYLOIDOSIS, ASTROGLIOSIS, ATHEROSCLEROSIS
Known Drugs/CompoundsLIRAGLUTIDE, DASATINIB, RAPAMYCIN, DIMETHYL FUMARATE, NICOTINAMIDE, MEMANTINE
InteractionsEIF2AK2, S100B, C1Q, TGM2, GPNMB, HMGB1
SciDEX HypothesesSelective Cholinergic Protection via APP Pathway M
KG Connections4431 knowledge graph edges
DatabasesGeneCardsHPASTRING
🧬 3D Structure: APP — PDB 1AAP Click to expand

Experimental structure from RCSB PDB | Powered by Mol*

Wiki Pages (21)

Knowledge base pages for this entity

Canonical Page

APP — Amyloid Precursor Protein

gene · 2551 words

cbs-psp-daily-action-plan

therapeutic · 30834 words

Clinical Management Guide for CBS/PSP

therapeutic · 15224 words

Corticobasal Syndrome (CBS)

disease · 11374 words

Novel Therapy Index

idea · 10647 words

CBS/PSP Rehabilitation Master Guide

therapeutic · 6539 words

Pathway Diagram

graph TD
    subgraph Pathology["Pathology"]
        APP["APP"] -->|"associated with"| Cancer["Cancer"]
        APP["APP"] -->|"associated with"| Neurodegeneration["Neurodegeneration"]
        APP["APP"] -->|"associated with"| PSEN1["PSEN1"]
        APP["APP"] -->|"associated with"| Alzheimer_3["Alzheimer"]
        APP["APP"] -->|"associated with"| Als_4["Als"]
        APOE["APOE"] -->|"associated with"| APP["APP"]
        APOPTOSIS["APOPTOSIS"] -->|"associated with"| APP["APP"]
        ALZHEIMER_S_DISEASE_5["ALZHEIMER'S DISEASE"] -->|"associated with"| APP["APP"]
    end
    subgraph Signaling["Signaling"]
        APP["APP"] -->|"activates"| Alzheimer["Alzheimer"]
        APP["APP"] -->|"activates"| Als_2["Als"]
        APP_PS1["APP/PS1"] -.->|"inhibits"| APP["APP"]
        APP_PS1_6["APP/PS1"] -->|"activates"| APP["APP"]
    end
    subgraph Therapeutic["Therapeutic"]
        APP["APP"] -->|"therapeutic target"| Alzheimer_1["Alzheimer"]
        APP["APP"] -->|"therapeutic target"| Als["Als"]
        ALZHEIMER_S_DISEASE["ALZHEIMER'S DISEASE"] -->|"therapeutic target"| APP["APP"]
    end
    style APP fill:#4a1a6b,stroke:#4fc3f7,stroke-width:3px,color:#e0e0e0,font-weight:bold
    style Cancer fill:#ef5350,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
    style Neurodegeneration fill:#ef5350,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
    style Alzheimer fill:#ef5350,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
    style Alzheimer_1 fill:#ef5350,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
    style Als fill:#ef5350,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
    style Als_2 fill:#ef5350,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
    style PSEN1 fill:#4a1a6b,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
    style Alzheimer_3 fill:#ef5350,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
    style Als_4 fill:#ef5350,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
    style APOE fill:#4a1a6b,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
    style APP_PS1 fill:#4a1a6b,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
    style APOPTOSIS fill:#4a1a6b,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
    style ALZHEIMER_S_DISEASE fill:#4a1a6b,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
    style ALZHEIMER_S_DISEASE_5 fill:#4a1a6b,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
    style APP_PS1_6 fill:#4a1a6b,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0

Outgoing (3298)

TargetRelationTypeStr
PSEN1associated_withgene1.00
BDNFassociated_withgene1.00
TNFassociated_withgene1.00
TAUassociated_withgene1.00
Cancerassociated_withdisease1.00

Incoming (3014)

SourceRelationTypeStr
APOEassociated_withgene1.00
APP/PS1inhibitsgene1.00
APOPTOSISassociated_withgene1.00
ALZHEIMER'S DISEASEtherapeutic_targetgene1.00
ALZHEIMER'S DISEASEassociated_withgene1.00

Targeting Hypotheses (3)

Hypotheses where this entity is a therapeutic target

HypothesisScoreDiseaseAnalysis
Glycosaminoglycan Template Disruption Approach 0.464 neurodegeneration Protein aggregation cross-seeding across
Selective Cholinergic Protection via APP Pathway Modulation 0.427 neurodegeneration Gene expression changes in aging mouse b
Synthetic Biology Approach: Designer Mitochondrial Export Sy 0.358 neurodegeneration Mitochondrial transfer between neurons a

Mentioning Analyses (30)

Scientific analyses that reference this entity

Should microtubule-stabilizing drugs be reconsidered as therapeutic targets for

neurodegeneration | 2026-04-15 | 2 hypotheses Top: 0.609

What molecular mechanisms link elevated sphingomyelin synthase activity to incre

neurodegeneration | 2026-04-15 | 1 hypotheses Top: 0.542

What molecular mechanisms cause iPLA2β deficiency to specifically damage mitocho

neurodegeneration | 2026-04-15 | 0 hypotheses

Why does autophagy inhibition improve neuronal survival when autophagy is typica

neurodegeneration | 2026-04-15 | 1 hypotheses Top: 0.557

Why does the V1613M variant reduce amyloid pathology when ABCA7 loss-of-function

neurodegeneration | 2026-04-14 | 2 hypotheses Top: 0.619

Related Papers (20)

Scientific publications cited in analyses involving this entity

Title & PMIDAuthorsJournalYearCitations
Cataract Aggravates Alzheimer-Like Pathologies and Cognitive Deficits in an APP/ [PMID:40580389] Geng Z, Yu ZY, Tan J, Wang XY, Zeng GH e Neurosci Bull 2026 0
HOPS disruption impairs APP trafficking and processing, promoting exosomal secre [PMID:41525887] Draper D, George AE, Veenendaal T, van D Neurobiol Dis 2026 0
TREM2 expression level is critical for microglial state, metabolic capacity and [PMID:41580393] Feiten AF, Dahm K, Schlepckow K, van Len Nat Commun 2026 0
APP-C31 pathology as a target in neurodegenerative diseases. [PMID:41639863] Yip KC, Ho WF, Liu Y, Dawe GS J Biomed Sci 2026 0
Anti-ASC antibodies alleviate Alzheimer's disease-type pathology in APP/PS1 mice [PMID:41707905] He L, Xiaopeng Z, Juan D, Yan L Neuroscience 2026 0
Decoding Alzheimer's disease through down syndrome: insights from a genetically [PMID:41709686] Russell JK, Schlachetzki Z, Rafii MS Curr Opin Neurol 2026 0
Apps for people with vision impairment: an international review of practitioner [PMID:41734772] Gothwal VK, Miller A, Boon MY, Subramani Clin Exp Optom 2026 0
Impaired TGFβ Signaling in Plaque-Associated Microglia. [PMID:41750318] Krzyzan O, Kuhla A, Spittau B, Vidovic N Biomolecules 2026 0
APP as an innate injury-response molecule. [PMID:41864298] Olmsted ZT, Sofroniew MV Neurobiol Dis 2026 0
Predifferentiation Neurotoxicity of GenX Exposure on hiPSC-Derived Cortical Neur [PMID:41871202] Wu S, Xie J, Zhao X, Zhao H, Sánchez OF Environ Sci Technol 2026 0
CRISPR-Cas9 and next-generation gene editing strategies for therapeutic interven [PMID:41931258] Khan MS, Zafar I, Jamal A, Bahwerth FS, Acta Neurol Belg 2026 0
Anti-alzheimer Drugs Development and Small Molecules: Mechanistic Understanding [PMID:41935386] Dhanawat M, Malik G, Wilson K, Bhushan B Curr Neuropharmacol 2026 0
Decoding the Secretase Puzzle in Amyloid-β Generation: A State-of-the-Art Overvi [PMID:41936903] Senkowska Z, Weglarz-Tomczak E Ageing Res Rev 2026 0
CeRNA regulatory network of cerebral microvascular dysfunction in early developm [PMID:41940832] Gu Q, Xie Y, Zhao Z, Zhuang Z, Yang L et J Alzheimers Dis 2026 0
mHealth-Enabled Stroke Screening for Pediatric Sickle Cell Disease in Low-Resour [PMID:41941725] Jahan N, Lee SY, Anjum N, Swahn M, Choi JMIR Pediatr Parent 2026 0
Accuracy and Reliability of Wearable Devices, Image Analysis Software, and Smart [PMID:41943283] Chakladar S, Davis CI, Sane ES, Dy CJ, B Hand (N Y) 2026 0
Implementing a Mediterranean Diet App in Patients With Atrial Fibrillation. [PMID:41945364] Su Y, Prasun MA, Cash LK, Kocheril AG, C J Cardiovasc Nurs 2026 0
Effectiveness of the mobile learning HiSense Taxi App for improving taxi drivers [PMID:41945624] Buist-Brink PNP, Vacaru VSS, Sterkenburg Disabil Rehabil Assist Technol 2026 0
A Mobile App-Based Individualized Nonpharmacological Intervention for Behavioral [PMID:41945646] Cho E, Yang M, Hwang S, Kim E, Cho J et JMIR Mhealth Uhealth 2026 0
Cultural Adaptation of a Digital Mobile App for Bipolar Disorder (PolarUs): Prot [PMID:41950274] Chau LW, Murphy JK, Morton E, Provencher JMIR Res Protoc 2026 0