Entity Detail — Knowledge Graph Node
This page aggregates everything SciDEX knows about APP: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.
Amyloid Precursor Protein (APP) is a type I transmembrane protein critical for neuronal development, synapse formation, and iron homeostasis. APP is cleaved by two competing pathways: the non-amyloidogenic pathway (alpha-secretase ADAM10) producing neuroprotective sAPPalpha, and the amyloidogenic pathway (BACE1 and gamma-secretase) producing amyloid-beta peptides (Abeta40 and Abeta42). Accumulation of Abeta42 triggers the amyloid cascade hypothesis of Alzheimer's disease. Over 50 familial AD mutations in APP increase Abeta42 production or aggregation propensity. APP is located on chromosome 21, explaining early-onset AD in Down syndrome. Current therapies target APP processing (BACE1 inhibitors, gamma-secretase modulators) or Abeta clearance (anti-amyloid antibodies like lecanemab and donanemab).
| Gene Symbol | APP |
| Full Name | Amyloid Precursor Protein |
| Chromosome | 21q21.3 |
| Protein Type | Protein |
| Function | is a type I transmembrane glycoprotein that plays a central role in the pathogenesis of Alzheimer's disease (AD). |
| Primary Expression | Ubiquitous, highest in brain |
| Molecular Weight | ~110 kDa |
| Exons | 18 |
| Pathways | Amyloid, Angiogenesis, Apoptosis, Autophagy, Blood-Brain Barrier |
| UniProt ID | P05067 |
| NCBI Gene ID | 351 |
| Ensembl ID | ENSG00000142192 |
| OMIM | 104760 |
| GeneCards | APP |
| Human Protein Atlas | APP |
| Associated Diseases | AD, ALS, AMI, AMYLOIDOSIS, ASTROGLIOSIS, ATHEROSCLEROSIS |
| Known Drugs/Compounds | LIRAGLUTIDE, DASATINIB, RAPAMYCIN, DIMETHYL FUMARATE, NICOTINAMIDE, MEMANTINE |
| Interactions | EIF2AK2, S100B, C1Q, TGM2, GPNMB, HMGB1 |
| SciDEX Hypotheses | Selective Cholinergic Protection via APP Pathway M |
| KG Connections | 4431 knowledge graph edges |
| Databases | GeneCardsHPASTRING |
Knowledge base pages for this entity
graph TD
subgraph Pathology["Pathology"]
APP["APP"] -->|"associated with"| Cancer["Cancer"]
APP["APP"] -->|"associated with"| Neurodegeneration["Neurodegeneration"]
APP["APP"] -->|"associated with"| PSEN1["PSEN1"]
APP["APP"] -->|"associated with"| Alzheimer_3["Alzheimer"]
APP["APP"] -->|"associated with"| Als_4["Als"]
APOE["APOE"] -->|"associated with"| APP["APP"]
APOPTOSIS["APOPTOSIS"] -->|"associated with"| APP["APP"]
ALZHEIMER_S_DISEASE_5["ALZHEIMER'S DISEASE"] -->|"associated with"| APP["APP"]
end
subgraph Signaling["Signaling"]
APP["APP"] -->|"activates"| Alzheimer["Alzheimer"]
APP["APP"] -->|"activates"| Als_2["Als"]
APP_PS1["APP/PS1"] -.->|"inhibits"| APP["APP"]
APP_PS1_6["APP/PS1"] -->|"activates"| APP["APP"]
end
subgraph Therapeutic["Therapeutic"]
APP["APP"] -->|"therapeutic target"| Alzheimer_1["Alzheimer"]
APP["APP"] -->|"therapeutic target"| Als["Als"]
ALZHEIMER_S_DISEASE["ALZHEIMER'S DISEASE"] -->|"therapeutic target"| APP["APP"]
end
style APP fill:#4a1a6b,stroke:#4fc3f7,stroke-width:3px,color:#e0e0e0,font-weight:bold
style Cancer fill:#ef5350,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
style Neurodegeneration fill:#ef5350,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
style Alzheimer fill:#ef5350,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
style Alzheimer_1 fill:#ef5350,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
style Als fill:#ef5350,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
style Als_2 fill:#ef5350,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
style PSEN1 fill:#4a1a6b,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
style Alzheimer_3 fill:#ef5350,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
style Als_4 fill:#ef5350,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
style APOE fill:#4a1a6b,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
style APP_PS1 fill:#4a1a6b,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
style APOPTOSIS fill:#4a1a6b,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
style ALZHEIMER_S_DISEASE fill:#4a1a6b,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
style ALZHEIMER_S_DISEASE_5 fill:#4a1a6b,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0
style APP_PS1_6 fill:#4a1a6b,stroke:#4fc3f7,stroke-width:1px,color:#e0e0e0| Target | Relation | Type | Str |
|---|---|---|---|
| PSEN1 | associated_with | gene | 1.00 |
| BDNF | associated_with | gene | 1.00 |
| TNF | associated_with | gene | 1.00 |
| TAU | associated_with | gene | 1.00 |
| Cancer | associated_with | disease | 1.00 |
| Neurodegeneration | associated_with | disease | 1.00 |
| Alzheimer | activates | disease | 1.00 |
| Alzheimer | therapeutic_target | disease | 1.00 |
| Als | therapeutic_target | disease | 1.00 |
| Als | activates | disease | 1.00 |
| Alzheimer | associated_with | disease | 1.00 |
| Als | associated_with | disease | 1.00 |
| Autophagy | activates | pathway | 1.00 |
| Alzheimer | regulates | disease | 1.00 |
| Als | regulates | disease | 1.00 |
| Inflammation | activates | disease | 1.00 |
| Alzheimer | inhibits | disease | 1.00 |
| Neuroinflammation | activates | disease | 1.00 |
| Neurodegeneration | activates | disease | 1.00 |
| Dementia | activates | disease | 1.00 |
| Alzheimer | protects_against | disease | 1.00 |
| MICROGLIA | associated_with | gene | 1.00 |
| DEMENTIA | associated_with | gene | 1.00 |
| NEUROINFLAMMATION | associated_with | gene | 1.00 |
| NEUROINFLAMMATION | activates | gene | 1.00 |
| Alzheimer | expressed_in | disease | 1.00 |
| Apoptosis | activates | pathway | 1.00 |
| Inflammation | inhibits | disease | 1.00 |
| Alzheimer | treats | disease | 1.00 |
| CORTEX | associated_with | brain_region | 1.00 |
| ASTROCYTES | associated_with | cell_type | 1.00 |
| HIPPOCAMPUS | associated_with | brain_region | 1.00 |
| ds-f50762b67605 | provides_data_for | dataset | 1.00 |
| ds-83b31ef18d49 | provides_data_for | dataset | 1.00 |
| ds-6784494f1741 | provides_data_for | dataset | 1.00 |
| Apoptosis | inhibits | pathway | 1.00 |
| GFAP | associated_with | gene | 0.98 |
| Amyloid-Beta Production | involved_in | process | 0.98 |
| NEURON | associated_with | gene | 0.98 |
| AUTOPHAGY | associated_with | gene | 0.98 |
| Amyloid-Beta Peptide | associated_with | compound | 0.95 |
| Amyloid-Beta Peptide | substrate_of | compound | 0.95 |
| Amyloid-β | substrate_of | compound | 0.95 |
| Amyloid-β | associated_with | compound | 0.95 |
| C99 | produces | protein | 0.95 |
| AMYLOID-BETA PEPTIDES | produces | protein | 0.95 |
| Autosomal Dominant Alzheimer's Disease | causes | disease | 0.95 |
| Amyloid-β | cleaves | compound | 0.95 |
| Amyloid-beta 1-42 | associated_with | protein | 0.95 |
| amyloid-β | associated_with | compound | 0.95 |
| Source | Relation | Type | Str |
|---|---|---|---|
| APOE | associated_with | gene | 1.00 |
| APP/PS1 | inhibits | gene | 1.00 |
| APOPTOSIS | associated_with | gene | 1.00 |
| ALZHEIMER'S DISEASE | therapeutic_target | gene | 1.00 |
| ALZHEIMER'S DISEASE | associated_with | gene | 1.00 |
| APP/PS1 | activates | gene | 1.00 |
| INFLAMMATION | activates | gene | 1.00 |
| APOPTOSIS | activates | gene | 1.00 |
| NEURODEGENERATION | associated_with | gene | 1.00 |
| AMYLOID | associated_with | gene | 1.00 |
| AMYLOID | activates | gene | 1.00 |
| ALZHEIMER | activates | gene | 1.00 |
| ALZHEIMER | associated_with | gene | 1.00 |
| AMYLOID | inhibits | gene | 1.00 |
| ALZHEIMER | inhibits | gene | 1.00 |
| NEURODEGENERATION | activates | gene | 1.00 |
| GENES | activates | gene | 1.00 |
| ALZHEIMER | therapeutic_target | gene | 1.00 |
| ds-f50762b67605 | data_in | dataset | 1.00 |
| ds-83b31ef18d49 | data_in | dataset | 1.00 |
| ds-6784494f1741 | data_in | dataset | 1.00 |
| ALZHEIMER'S DISEASE | protects_against | gene | 1.00 |
| AMYLOID-BETA | associated_with | gene | 1.00 |
| ALZHEIMER | protects_against | gene | 1.00 |
| GENES | expressed_in | gene | 1.00 |
| ALZHEIMER | treats | gene | 1.00 |
| ALZHEIMER'S DISEASE | treats | gene | 1.00 |
| AMYLOID | therapeutic_target | gene | 1.00 |
| Γ-SECRETASE | cleaves | enzyme | 0.95 |
| AMYLOID | degrades | protein | 0.95 |
| oleanonic acid | downregulates | drug | 0.90 |
| BACE1 | cleaves | protein | 0.90 |
| Presenilin Complex | associated_with | protein | 0.90 |
| BACE | associated_with | enzyme | 0.90 |
| SEPT8 | modulates | protein | 0.90 |
| Gamma-Secretase Complex | targets | enzyme | 0.90 |
| ADAMTS4 | cleaves | enzyme | 0.90 |
| ADAMTS5 | cleaves | enzyme | 0.90 |
| HOPS | regulates | protein | 0.90 |
| MEPRIN Β | cleaves | enzyme | 0.90 |
| ALZHEIMER'S DISEASE | regulates | gene | 0.90 |
| Platelets | expressed_in | cell_type | 0.90 |
| h-0d576989 | targets_gene | hypothesis | 0.90 |
| hyp-SDA-2026-04-12-20260411-082446-2c1c9e2d-1 | targets_gene | hypothesis | 0.90 |
| TLR4 | activates | gene | 0.90 |
| NLRP3 | activates | gene | 0.90 |
| TAU | activates | gene | 0.90 |
| TAU | regulates | gene | 0.90 |
| ASTROCYTES | activates | gene | 0.90 |
| ALZHEIMER'S DISEASE | expressed_in | gene | 0.90 |
Hypotheses where this entity is a therapeutic target
| Hypothesis | Score | Disease | Analysis |
|---|---|---|---|
| Glycosaminoglycan Template Disruption Approach | 0.464 | neurodegeneration | Protein aggregation cross-seeding across |
| Selective Cholinergic Protection via APP Pathway Modulation | 0.427 | neurodegeneration | Gene expression changes in aging mouse b |
| Synthetic Biology Approach: Designer Mitochondrial Export Sy | 0.358 | neurodegeneration | Mitochondrial transfer between neurons a |
Scientific analyses that reference this entity
neurodegeneration | 2026-04-15 | 2 hypotheses Top: 0.609
neurodegeneration | 2026-04-15 | 1 hypotheses Top: 0.542
neurodegeneration | 2026-04-15 | 0 hypotheses
neurodegeneration | 2026-04-15 | 1 hypotheses Top: 0.557
neurodegeneration | 2026-04-14 | 2 hypotheses Top: 0.619
Scientific publications cited in analyses involving this entity
| Title & PMID | Authors | Journal | Year | Citations |
|---|---|---|---|---|
| Cataract Aggravates Alzheimer-Like Pathologies and Cognitive Deficits in an APP/ [PMID:40580389] | Geng Z, Yu ZY, Tan J, Wang XY, Zeng GH e | Neurosci Bull | 2026 | 0 |
| HOPS disruption impairs APP trafficking and processing, promoting exosomal secre [PMID:41525887] | Draper D, George AE, Veenendaal T, van D | Neurobiol Dis | 2026 | 0 |
| TREM2 expression level is critical for microglial state, metabolic capacity and [PMID:41580393] | Feiten AF, Dahm K, Schlepckow K, van Len | Nat Commun | 2026 | 0 |
| APP-C31 pathology as a target in neurodegenerative diseases. [PMID:41639863] | Yip KC, Ho WF, Liu Y, Dawe GS | J Biomed Sci | 2026 | 0 |
| Anti-ASC antibodies alleviate Alzheimer's disease-type pathology in APP/PS1 mice [PMID:41707905] | He L, Xiaopeng Z, Juan D, Yan L | Neuroscience | 2026 | 0 |
| Decoding Alzheimer's disease through down syndrome: insights from a genetically [PMID:41709686] | Russell JK, Schlachetzki Z, Rafii MS | Curr Opin Neurol | 2026 | 0 |
| Apps for people with vision impairment: an international review of practitioner [PMID:41734772] | Gothwal VK, Miller A, Boon MY, Subramani | Clin Exp Optom | 2026 | 0 |
| Impaired TGFβ Signaling in Plaque-Associated Microglia. [PMID:41750318] | Krzyzan O, Kuhla A, Spittau B, Vidovic N | Biomolecules | 2026 | 0 |
| APP as an innate injury-response molecule. [PMID:41864298] | Olmsted ZT, Sofroniew MV | Neurobiol Dis | 2026 | 0 |
| Predifferentiation Neurotoxicity of GenX Exposure on hiPSC-Derived Cortical Neur [PMID:41871202] | Wu S, Xie J, Zhao X, Zhao H, Sánchez OF | Environ Sci Technol | 2026 | 0 |
| CRISPR-Cas9 and next-generation gene editing strategies for therapeutic interven [PMID:41931258] | Khan MS, Zafar I, Jamal A, Bahwerth FS, | Acta Neurol Belg | 2026 | 0 |
| Anti-alzheimer Drugs Development and Small Molecules: Mechanistic Understanding [PMID:41935386] | Dhanawat M, Malik G, Wilson K, Bhushan B | Curr Neuropharmacol | 2026 | 0 |
| Decoding the Secretase Puzzle in Amyloid-β Generation: A State-of-the-Art Overvi [PMID:41936903] | Senkowska Z, Weglarz-Tomczak E | Ageing Res Rev | 2026 | 0 |
| CeRNA regulatory network of cerebral microvascular dysfunction in early developm [PMID:41940832] | Gu Q, Xie Y, Zhao Z, Zhuang Z, Yang L et | J Alzheimers Dis | 2026 | 0 |
| mHealth-Enabled Stroke Screening for Pediatric Sickle Cell Disease in Low-Resour [PMID:41941725] | Jahan N, Lee SY, Anjum N, Swahn M, Choi | JMIR Pediatr Parent | 2026 | 0 |
| Accuracy and Reliability of Wearable Devices, Image Analysis Software, and Smart [PMID:41943283] | Chakladar S, Davis CI, Sane ES, Dy CJ, B | Hand (N Y) | 2026 | 0 |
| Implementing a Mediterranean Diet App in Patients With Atrial Fibrillation. [PMID:41945364] | Su Y, Prasun MA, Cash LK, Kocheril AG, C | J Cardiovasc Nurs | 2026 | 0 |
| Effectiveness of the mobile learning HiSense Taxi App for improving taxi drivers [PMID:41945624] | Buist-Brink PNP, Vacaru VSS, Sterkenburg | Disabil Rehabil Assist Technol | 2026 | 0 |
| A Mobile App-Based Individualized Nonpharmacological Intervention for Behavioral [PMID:41945646] | Cho E, Yang M, Hwang S, Kim E, Cho J et | JMIR Mhealth Uhealth | 2026 | 0 |
| Cultural Adaptation of a Digital Mobile App for Bipolar Disorder (PolarUs): Prot [PMID:41950274] | Chau LW, Murphy JK, Morton E, Provencher | JMIR Res Protoc | 2026 | 0 |