Entity Detail — Knowledge Graph Node
This page aggregates everything SciDEX knows about PRKDC: its mechanistic relationships (Knowledge Graph edges), hypotheses targeting it, analyses mentioning it, and supporting scientific papers. The interactive graph below shows its immediate neighbors. All content is AI-synthesized from peer-reviewed literature.
| Gene Symbol | PRKDC |
| Full Name | DNA-Dependent Protein Kinase Catalytic Subunit |
| Chromosome | 8q13-q21 |
| Protein Family | PI3/PI4-related kinase family |
| Function | DNA damage detection: Ku70/Ku80 heterodimer binds DSB ends |
| Primary Expression | neurons and glia throughout the CNS: |
| Molecular Weight | 469 kDa |
| Amino Acids | 128 aa |
| Pathways | Autophagy |
| UniProt ID | [P78527](https://www.uniprot.org/uniprot/P78527) |
| Ensembl ID | ENSG00000151067 |
| OMIM | 300123 |
| GeneCards | PRKDC |
| Human Protein Atlas | PRKDC |
| Associated Diseases | Tumor |
| Interactions | STK11, SLC17A6, SQSTM1, TRPM2, ULK1, CANCER |
| KG Connections | 51 knowledge graph edges |
| Databases | GeneCardsNCBI GeneHPASTRING |
Knowledge base pages for this entity
graph TD
PRKDC["<b>PRKDC</b>"]
Glioblastoma{"Glioblastoma"}
PRKDC -->|"inhibits"| Glioblastoma
Tumor{"Tumor"}
PRKDC -->|"associated with"| Tumor
Cancer{"Cancer"}
PRKDC -->|"activates"| Cancer
Carcinoma{"Carcinoma"}
PRKDC -->|"activates"| Carcinoma
DRP1["DRP1"]
PRKDC -->|"associated with"| DRP1
GBM["GBM"]
PRKDC -->|"associated with"| GBM
Mitophagy(["Mitophagy"])
PRKDC -->|"inhibits"| Mitophagy
Oxidative_Phosphorylation(["Oxidative Phosphorylation"])
PRKDC -->|"inhibits"| Oxidative_Phosphorylation
DNM1L["DNM1L"]
PRKDC -->|"associated with"| DNM1L
FIS1["FIS1"]
PRKDC -->|"associated with"| FIS1
STK11["STK11"]
PRKDC -->|"activates"| STK11
ULK1["ULK1"]
PRKDC -->|"regulates"| ULK1
SOX2["SOX2"]
SOX2 -->|"interacts with"| PRKDC
DNM1L -->|"associated with"| PRKDC
FIS1 -->|"associated with"| PRKDC
MFF["MFF"]
MFF -->|"associated with"| PRKDC
DRP1 -->|"associated with"| PRKDC
MITOPHAGY["MITOPHAGY"]
MITOPHAGY -->|"inhibits"| PRKDC
style PRKDC fill:#1a3a4a,stroke:#4fc3f7,stroke-width:3px,color:#e0e0e0| Target | Relation | Type | Str |
|---|---|---|---|
| Glioblastoma | inhibits | disease | 0.65 |
| Tumor | associated_with | disease | 0.65 |
| Cancer | activates | disease | 0.65 |
| Carcinoma | activates | disease | 0.65 |
| DRP1 | associated_with | gene | 0.60 |
| GBM | associated_with | gene | 0.60 |
| DNM1L | associated_with | gene | 0.60 |
| FIS1 | associated_with | gene | 0.60 |
| STK11 | activates | gene | 0.60 |
| ULK1 | regulates | gene | 0.60 |
| SLC17A6 | activates | gene | 0.60 |
| SQSTM1 | activates | gene | 0.60 |
| TRPM2 | activates | gene | 0.60 |
| ULK1 | activates | gene | 0.60 |
| Mitophagy | inhibits | pathway | 0.60 |
| Oxidative Phosphorylation | inhibits | pathway | 0.60 |
| CANCER | activates | gene | 0.60 |
| AUTOPHAGY | regulates | gene | 0.60 |
| AMPK | interacts_with | gene | 0.60 |
| Autophagy | regulates | pathway | 0.60 |
| ROS | activates | gene | 0.60 |
| VPS34 | activates | gene | 0.60 |
| traumatic brain injury | activates | disease | 0.60 |
| blood-brain barrier | participates_in | pathway | 0.60 |
| autophagy pathway | participates_in | pathway | 0.60 |
| oxidative stress response | participates_in | pathway | 0.60 |
| endothelial cells | expressed_in | cell_type | 0.60 |
| Source | Relation | Type | Str |
|---|---|---|---|
| DNM1L | associated_with | gene | 0.60 |
| FIS1 | associated_with | gene | 0.60 |
| MFF | associated_with | gene | 0.60 |
| DRP1 | associated_with | gene | 0.60 |
| ATG5 | activates | gene | 0.60 |
| BECN1 | activates | gene | 0.60 |
| CAMK2 | activates | gene | 0.60 |
| CASP3 | activates | gene | 0.60 |
| DMPK | activates | gene | 0.60 |
| GFAP | activates | gene | 0.60 |
| HIF1A | activates | gene | 0.60 |
| HMGCR | activates | gene | 0.60 |
| LAMP1 | activates | gene | 0.60 |
| LC3 | activates | gene | 0.60 |
| MAP1LC3B | activates | gene | 0.60 |
| PIK3C3 | activates | gene | 0.60 |
| PLP1 | activates | gene | 0.60 |
| MITOPHAGY | inhibits | gene | 0.60 |
| AMPK | activates | gene | 0.60 |
| DMSO | activates | gene | 0.60 |
| DNA | activates | gene | 0.60 |
| GFP | activates | gene | 0.60 |
| HIF | activates | gene | 0.60 |
| LC3B | activates | gene | 0.60 |
Hypotheses where this entity is a therapeutic target
| Hypothesis | Score | Disease | Analysis |
|---|---|---|---|
| No targeting hypotheses | |||
Scientific analyses that reference this entity
No analyses mention this entity
Scientific publications cited in analyses involving this entity
| Title & PMID | Authors | Journal | Year | Citations |
|---|---|---|---|---|
| No papers found | ||||